Experiment: tungstate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4581 and Pf6N2E2_4582 are separated by 155 nucleotides Pf6N2E2_4582 and Pf6N2E2_4583 are separated by 57 nucleotides Pf6N2E2_4583 and Pf6N2E2_4584 overlap by 4 nucleotides Pf6N2E2_4584 and Pf6N2E2_4585 overlap by 4 nucleotides
Pf6N2E2_4581 - FIG015547: peptidase, M16 family, at 5,311,596 to 5,312,951
_4581
Pf6N2E2_4582 - hypothetical protein, at 5,313,107 to 5,313,238
_4582
Pf6N2E2_4583 - Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1), at 5,313,296 to 5,314,729
_4583
Pf6N2E2_4584 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 5,314,726 to 5,315,397
_4584
Pf6N2E2_4585 - Cell division protein FtsX, at 5,315,394 to 5,316,416
_4585
Position (kb) 5313
5314
5315 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5312.330 kb on - strand, within Pf6N2E2_4581 at 5312.450 kb on - strand, within Pf6N2E2_4581 at 5312.608 kb on + strand, within Pf6N2E2_4581 at 5312.608 kb on + strand, within Pf6N2E2_4581 at 5312.609 kb on - strand, within Pf6N2E2_4581 at 5312.609 kb on - strand, within Pf6N2E2_4581 at 5312.609 kb on - strand, within Pf6N2E2_4581 at 5312.609 kb on - strand, within Pf6N2E2_4581 at 5312.611 kb on + strand, within Pf6N2E2_4581 at 5312.611 kb on + strand, within Pf6N2E2_4581 at 5312.612 kb on - strand, within Pf6N2E2_4581 at 5312.612 kb on - strand, within Pf6N2E2_4581 at 5312.761 kb on + strand, within Pf6N2E2_4581 at 5312.779 kb on + strand, within Pf6N2E2_4581 at 5312.779 kb on + strand, within Pf6N2E2_4581 at 5312.779 kb on + strand, within Pf6N2E2_4581 at 5313.011 kb on + strand at 5313.057 kb on + strand at 5313.240 kb on + strand at 5313.240 kb on + strand at 5313.240 kb on + strand at 5313.240 kb on + strand at 5313.244 kb on + strand at 5313.244 kb on + strand at 5314.851 kb on + strand, within Pf6N2E2_4584 at 5314.851 kb on + strand, within Pf6N2E2_4584 at 5314.951 kb on + strand, within Pf6N2E2_4584 at 5314.952 kb on - strand, within Pf6N2E2_4584 at 5315.261 kb on + strand, within Pf6N2E2_4584 at 5315.331 kb on + strand at 5315.393 kb on + strand at 5315.393 kb on + strand at 5315.393 kb on + strand at 5315.402 kb on + strand at 5315.403 kb on - strand at 5315.591 kb on + strand, within Pf6N2E2_4585 at 5315.591 kb on + strand, within Pf6N2E2_4585 at 5315.703 kb on + strand, within Pf6N2E2_4585
Per-strain Table
Position Strand Gene LocusTag Fraction tungstate 0.05 M remove 5,312,330 - Pf6N2E2_4581 0.54 -0.3 5,312,450 - Pf6N2E2_4581 0.63 -2.2 5,312,608 + Pf6N2E2_4581 0.75 -0.3 5,312,608 + Pf6N2E2_4581 0.75 -2.0 5,312,609 - Pf6N2E2_4581 0.75 +1.0 5,312,609 - Pf6N2E2_4581 0.75 -1.3 5,312,609 - Pf6N2E2_4581 0.75 -0.1 5,312,609 - Pf6N2E2_4581 0.75 -0.2 5,312,611 + Pf6N2E2_4581 0.75 +0.0 5,312,611 + Pf6N2E2_4581 0.75 -0.6 5,312,612 - Pf6N2E2_4581 0.75 -0.5 5,312,612 - Pf6N2E2_4581 0.75 -0.8 5,312,761 + Pf6N2E2_4581 0.86 -2.5 5,312,779 + Pf6N2E2_4581 0.87 -0.2 5,312,779 + Pf6N2E2_4581 0.87 -0.7 5,312,779 + Pf6N2E2_4581 0.87 +0.0 5,313,011 + -1.1 5,313,057 + +1.0 5,313,240 + -0.5 5,313,240 + -0.1 5,313,240 + +0.2 5,313,240 + -1.6 5,313,244 + +0.2 5,313,244 + -0.1 5,314,851 + Pf6N2E2_4584 0.19 -2.5 5,314,851 + Pf6N2E2_4584 0.19 -2.6 5,314,951 + Pf6N2E2_4584 0.33 -0.5 5,314,952 - Pf6N2E2_4584 0.34 -1.7 5,315,261 + Pf6N2E2_4584 0.80 -0.7 5,315,331 + -3.2 5,315,393 + -3.3 5,315,393 + -3.3 5,315,393 + -0.7 5,315,402 + -1.8 5,315,403 - -0.5 5,315,591 + Pf6N2E2_4585 0.19 -2.9 5,315,591 + Pf6N2E2_4585 0.19 -0.8 5,315,703 + Pf6N2E2_4585 0.30 -2.5
Or see this region's nucleotide sequence