Experiment: tungstate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1272 and Pf6N2E2_1273 overlap by 4 nucleotides Pf6N2E2_1273 and Pf6N2E2_1274 are separated by 192 nucleotides Pf6N2E2_1274 and Pf6N2E2_1275 are separated by 127 nucleotides
Pf6N2E2_1272 - Acriflavin resistance plasma membrane protein, at 1,500,963 to 1,504,058
_1272
Pf6N2E2_1273 - Probable RND efflux membrane fusion protein, at 1,504,055 to 1,505,356
_1273
Pf6N2E2_1274 - Thiol peroxidase, Tpx-type (EC 1.11.1.15), at 1,505,549 to 1,506,049
_1274
Pf6N2E2_1275 - Putative outer membrane lipoprotein, at 1,506,177 to 1,506,848
_1275
Position (kb)
1504
1505
1506 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1503.317 kb on - strand, within Pf6N2E2_1272 at 1503.443 kb on + strand, within Pf6N2E2_1272 at 1503.443 kb on + strand, within Pf6N2E2_1272 at 1503.674 kb on - strand, within Pf6N2E2_1272 at 1503.785 kb on + strand at 1504.255 kb on + strand, within Pf6N2E2_1273 at 1504.256 kb on - strand, within Pf6N2E2_1273 at 1504.324 kb on - strand, within Pf6N2E2_1273 at 1504.815 kb on + strand, within Pf6N2E2_1273 at 1504.816 kb on - strand, within Pf6N2E2_1273 at 1504.901 kb on + strand, within Pf6N2E2_1273 at 1504.972 kb on - strand, within Pf6N2E2_1273 at 1505.115 kb on + strand, within Pf6N2E2_1273 at 1505.115 kb on + strand, within Pf6N2E2_1273 at 1505.116 kb on - strand, within Pf6N2E2_1273 at 1505.300 kb on + strand at 1505.300 kb on + strand at 1505.301 kb on - strand at 1505.451 kb on + strand at 1505.452 kb on - strand at 1505.463 kb on - strand at 1505.538 kb on + strand at 1505.545 kb on + strand at 1505.546 kb on - strand at 1505.546 kb on - strand at 1505.577 kb on + strand at 1505.578 kb on - strand at 1505.700 kb on + strand, within Pf6N2E2_1274 at 1506.119 kb on + strand at 1506.120 kb on - strand at 1506.120 kb on - strand at 1506.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction tungstate 0.05 M remove 1,503,317 - Pf6N2E2_1272 0.76 -2.6 1,503,443 + Pf6N2E2_1272 0.80 -3.2 1,503,443 + Pf6N2E2_1272 0.80 -3.4 1,503,674 - Pf6N2E2_1272 0.88 -1.5 1,503,785 + -2.0 1,504,255 + Pf6N2E2_1273 0.15 -2.1 1,504,256 - Pf6N2E2_1273 0.15 -2.8 1,504,324 - Pf6N2E2_1273 0.21 -0.8 1,504,815 + Pf6N2E2_1273 0.58 -2.1 1,504,816 - Pf6N2E2_1273 0.58 -2.2 1,504,901 + Pf6N2E2_1273 0.65 +0.3 1,504,972 - Pf6N2E2_1273 0.70 -2.4 1,505,115 + Pf6N2E2_1273 0.81 -2.4 1,505,115 + Pf6N2E2_1273 0.81 -2.8 1,505,116 - Pf6N2E2_1273 0.81 -1.8 1,505,300 + -1.8 1,505,300 + -2.6 1,505,301 - -1.7 1,505,451 + +1.3 1,505,452 - +0.7 1,505,463 - +2.1 1,505,538 + -3.0 1,505,545 + +2.9 1,505,546 - -0.5 1,505,546 - +0.1 1,505,577 + -3.0 1,505,578 - +0.3 1,505,700 + Pf6N2E2_1274 0.30 -0.2 1,506,119 + +0.1 1,506,120 - +0.1 1,506,120 - -0.2 1,506,132 - +0.3
Or see this region's nucleotide sequence