Experiment: D-Glucose (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2138 and Ga0059261_2139 are separated by 247 nucleotides Ga0059261_2139 and Ga0059261_2140 are separated by 12 nucleotides
Ga0059261_2138: Ga0059261_2138 - transcriptional regulator, AraC family, at 2,251,201 to 2,252,013
_2138
Ga0059261_2139: Ga0059261_2139 - Siderophore-interacting FAD-binding domain, at 2,252,261 to 2,253,007
_2139
Ga0059261_2140: Ga0059261_2140 - polyribonucleotide nucleotidyltransferase, at 2,253,020 to 2,255,374
_2140
Position (kb)
2252
2253
2254 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2251.295 kb on + strand, within Ga0059261_2138 at 2251.296 kb on - strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.739 kb on + strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.963 kb on - strand at 2251.963 kb on - strand at 2252.013 kb on + strand at 2252.013 kb on + strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.049 kb on - strand at 2252.051 kb on + strand at 2252.051 kb on + strand at 2252.051 kb on + strand at 2252.052 kb on - strand at 2252.094 kb on + strand at 2252.094 kb on + strand at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.693 kb on + strand, within Ga0059261_2139 at 2252.694 kb on - strand, within Ga0059261_2139 at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.888 kb on + strand at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.889 kb on - strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.905 kb on - strand, within Ga0059261_2139 at 2252.905 kb on - strand, within Ga0059261_2139 at 2253.021 kb on + strand at 2253.021 kb on + strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); no added vitamins remove 2,251,295 + Ga0059261_2138 0.12 -0.2 2,251,296 - Ga0059261_2138 0.12 -0.2 2,251,432 + Ga0059261_2138 0.28 +0.4 2,251,432 + Ga0059261_2138 0.28 +1.6 2,251,432 + -1.3 2,251,432 + Ga0059261_2138 0.28 +0.4 2,251,432 + Ga0059261_2138 0.28 +0.4 2,251,432 + Ga0059261_2138 0.28 +0.5 2,251,432 + Ga0059261_2138 0.28 +0.1 2,251,433 - Ga0059261_2138 0.29 -0.1 2,251,433 - Ga0059261_2138 0.29 +0.1 2,251,433 - Ga0059261_2138 0.29 +0.1 2,251,622 + Ga0059261_2138 0.52 -3.2 2,251,622 + Ga0059261_2138 0.52 +0.3 2,251,622 + Ga0059261_2138 0.52 -0.6 2,251,622 + Ga0059261_2138 0.52 +0.5 2,251,622 + Ga0059261_2138 0.52 +0.6 2,251,622 + Ga0059261_2138 0.52 +1.3 2,251,623 - Ga0059261_2138 0.52 -3.0 2,251,623 - Ga0059261_2138 0.52 +0.4 2,251,623 - Ga0059261_2138 0.52 +0.5 2,251,695 + Ga0059261_2138 0.61 +2.2 2,251,695 + Ga0059261_2138 0.61 +0.9 2,251,695 + Ga0059261_2138 0.61 +1.4 2,251,739 + Ga0059261_2138 0.66 -0.4 2,251,740 - Ga0059261_2138 0.66 +0.1 2,251,740 - Ga0059261_2138 0.66 +0.8 2,251,740 - Ga0059261_2138 0.66 -0.3 2,251,963 - -0.8 2,251,963 - +1.5 2,252,013 + +1.6 2,252,013 + +0.3 2,252,014 - +0.2 2,252,014 - -0.6 2,252,014 - -2.1 2,252,014 - +0.7 2,252,049 - -0.1 2,252,051 + -0.1 2,252,051 + +0.7 2,252,051 + +0.7 2,252,052 - +0.3 2,252,094 + -0.1 2,252,094 + -4.2 2,252,489 + Ga0059261_2139 0.31 -0.4 2,252,489 + Ga0059261_2139 0.31 -0.9 2,252,489 + Ga0059261_2139 0.31 +2.0 2,252,489 + Ga0059261_2139 0.31 -1.1 2,252,490 - Ga0059261_2139 0.31 -3.5 2,252,490 - Ga0059261_2139 0.31 +0.1 2,252,490 - Ga0059261_2139 0.31 -0.1 2,252,490 - Ga0059261_2139 0.31 -4.2 2,252,490 - Ga0059261_2139 0.31 -0.3 2,252,490 - Ga0059261_2139 0.31 +1.3 2,252,490 - Ga0059261_2139 0.31 +0.2 2,252,490 - Ga0059261_2139 0.31 -0.1 2,252,693 + Ga0059261_2139 0.58 -0.1 2,252,694 - Ga0059261_2139 0.58 -1.5 2,252,888 + Ga0059261_2139 0.84 +0.5 2,252,888 + +0.8 2,252,888 + Ga0059261_2139 0.84 +1.6 2,252,888 + Ga0059261_2139 0.84 -0.5 2,252,889 - Ga0059261_2139 0.84 -0.5 2,252,904 + Ga0059261_2139 0.86 -0.9 2,252,904 + Ga0059261_2139 0.86 -0.8 2,252,904 + Ga0059261_2139 0.86 +0.4 2,252,904 + Ga0059261_2139 0.86 -0.8 2,252,905 - Ga0059261_2139 0.86 -0.3 2,252,905 - Ga0059261_2139 0.86 +0.4 2,253,021 + +0.5 2,253,021 + +0.8 2,253,022 - -2.7 2,253,022 - -2.5 2,253,022 - -4.6 2,253,022 - -3.6 2,253,022 - -0.4
Or see this region's nucleotide sequence