Experiment: D-Glucose (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0849 and Ga0059261_0850 overlap by 16 nucleotides Ga0059261_0850 and Ga0059261_0851 are separated by 8 nucleotides Ga0059261_0851 and Ga0059261_0852 are separated by 288 nucleotides Ga0059261_0852 and Ga0059261_0853 are separated by 135 nucleotides
Ga0059261_0849: Ga0059261_0849 - transcriptional regulator, TetR family, at 890,126 to 890,854
_0849
Ga0059261_0850: Ga0059261_0850 - hypothetical protein, at 890,839 to 891,246
_0850
Ga0059261_0851: Ga0059261_0851 - Alpha/beta hydrolase family, at 891,255 to 892,214
_0851
Ga0059261_0852: Ga0059261_0852 - Transcriptional regulators, at 892,503 to 892,979
_0852
Ga0059261_0853: Ga0059261_0853 - peroxiredoxin, Ohr subfamily, at 893,115 to 893,540
_0853
Position (kb) 891
892
893 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 890.291 kb on + strand, within Ga0059261_0849 at 890.291 kb on + strand, within Ga0059261_0849 at 890.291 kb on + strand, within Ga0059261_0849 at 890.292 kb on - strand, within Ga0059261_0849 at 890.292 kb on - strand, within Ga0059261_0849 at 890.292 kb on - strand, within Ga0059261_0849 at 890.292 kb on - strand, within Ga0059261_0849 at 890.293 kb on + strand, within Ga0059261_0849 at 890.294 kb on - strand, within Ga0059261_0849 at 890.405 kb on + strand, within Ga0059261_0849 at 890.405 kb on + strand, within Ga0059261_0849 at 890.406 kb on - strand, within Ga0059261_0849 at 890.406 kb on - strand, within Ga0059261_0849 at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.830 kb on + strand at 890.831 kb on - strand at 890.831 kb on - strand at 890.831 kb on - strand at 891.046 kb on - strand, within Ga0059261_0850 at 891.046 kb on - strand, within Ga0059261_0850 at 891.057 kb on + strand, within Ga0059261_0850 at 891.388 kb on + strand, within Ga0059261_0851 at 891.388 kb on + strand, within Ga0059261_0851 at 891.389 kb on - strand, within Ga0059261_0851 at 891.389 kb on - strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.394 kb on + strand, within Ga0059261_0851 at 891.395 kb on - strand, within Ga0059261_0851 at 891.395 kb on - strand, within Ga0059261_0851 at 891.395 kb on - strand, within Ga0059261_0851 at 891.520 kb on + strand, within Ga0059261_0851 at 891.520 kb on + strand, within Ga0059261_0851 at 891.520 kb on + strand, within Ga0059261_0851 at 891.520 kb on + strand, within Ga0059261_0851 at 891.521 kb on - strand, within Ga0059261_0851 at 891.521 kb on - strand, within Ga0059261_0851 at 891.524 kb on - strand, within Ga0059261_0851 at 891.524 kb on - strand, within Ga0059261_0851 at 891.524 kb on - strand, within Ga0059261_0851 at 891.554 kb on + strand, within Ga0059261_0851 at 891.554 kb on + strand, within Ga0059261_0851 at 891.555 kb on - strand, within Ga0059261_0851 at 891.601 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.799 kb on + strand, within Ga0059261_0851 at 891.800 kb on - strand, within Ga0059261_0851 at 891.800 kb on - strand, within Ga0059261_0851 at 891.869 kb on - strand, within Ga0059261_0851 at 891.934 kb on + strand, within Ga0059261_0851 at 891.934 kb on + strand, within Ga0059261_0851 at 891.934 kb on + strand, within Ga0059261_0851 at 891.934 kb on + strand, within Ga0059261_0851 at 891.935 kb on - strand, within Ga0059261_0851 at 891.935 kb on - strand, within Ga0059261_0851 at 891.935 kb on - strand, within Ga0059261_0851 at 891.935 kb on - strand, within Ga0059261_0851 at 891.935 kb on - strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.940 kb on + strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 891.941 kb on - strand, within Ga0059261_0851 at 892.008 kb on - strand, within Ga0059261_0851 at 892.021 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.105 kb on + strand, within Ga0059261_0851 at 892.106 kb on - strand, within Ga0059261_0851 at 892.203 kb on + strand at 892.203 kb on + strand at 892.203 kb on + strand at 892.203 kb on + strand at 892.203 kb on + strand at 892.203 kb on + strand at 892.204 kb on - strand at 892.204 kb on - strand at 892.204 kb on - strand at 892.204 kb on - strand at 892.361 kb on + strand at 892.361 kb on + strand at 892.361 kb on + strand at 892.362 kb on - strand at 892.362 kb on - strand at 892.362 kb on - strand at 892.362 kb on - strand at 892.404 kb on - strand at 892.404 kb on - strand at 892.444 kb on + strand at 892.444 kb on + strand at 892.445 kb on - strand at 892.449 kb on + strand at 892.449 kb on + strand at 892.449 kb on + strand at 892.449 kb on + strand at 892.449 kb on + strand at 892.449 kb on + strand at 892.450 kb on - strand at 892.450 kb on - strand at 892.538 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.546 kb on + strand at 892.547 kb on - strand at 892.547 kb on - strand at 892.547 kb on - strand at 892.547 kb on - strand at 892.547 kb on - strand at 892.547 kb on - strand at 892.849 kb on + strand, within Ga0059261_0852 at 892.849 kb on + strand, within Ga0059261_0852 at 892.849 kb on + strand, within Ga0059261_0852 at 892.849 kb on + strand, within Ga0059261_0852 at 892.850 kb on - strand, within Ga0059261_0852 at 892.850 kb on - strand, within Ga0059261_0852 at 892.850 kb on - strand, within Ga0059261_0852 at 892.850 kb on - strand, within Ga0059261_0852 at 892.858 kb on + strand, within Ga0059261_0852 at 892.859 kb on - strand, within Ga0059261_0852 at 892.891 kb on + strand, within Ga0059261_0852 at 892.891 kb on + strand, within Ga0059261_0852 at 892.891 kb on + strand, within Ga0059261_0852 at 892.891 kb on + strand, within Ga0059261_0852 at 892.892 kb on - strand, within Ga0059261_0852 at 892.892 kb on - strand, within Ga0059261_0852 at 892.892 kb on - strand, within Ga0059261_0852 at 892.892 kb on - strand, within Ga0059261_0852 at 892.892 kb on - strand, within Ga0059261_0852 at 892.922 kb on - strand, within Ga0059261_0852 at 892.930 kb on + strand, within Ga0059261_0852 at 892.930 kb on + strand, within Ga0059261_0852 at 892.931 kb on - strand, within Ga0059261_0852 at 892.931 kb on - strand, within Ga0059261_0852 at 893.066 kb on + strand at 893.067 kb on - strand at 893.067 kb on - strand at 893.067 kb on - strand at 893.067 kb on - strand at 893.067 kb on - strand at 893.127 kb on + strand at 893.127 kb on + strand at 893.128 kb on - strand at 893.128 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); no added vitamins remove 890,291 + Ga0059261_0849 0.23 +0.9 890,291 + Ga0059261_0849 0.23 +0.0 890,291 + Ga0059261_0849 0.23 +1.5 890,292 - Ga0059261_0849 0.23 -0.7 890,292 - Ga0059261_0849 0.23 +0.5 890,292 - Ga0059261_0849 0.23 +0.4 890,292 - Ga0059261_0849 0.23 +0.1 890,293 + Ga0059261_0849 0.23 +0.0 890,294 - Ga0059261_0849 0.23 -0.4 890,405 + Ga0059261_0849 0.38 -0.0 890,405 + Ga0059261_0849 0.38 -0.5 890,406 - Ga0059261_0849 0.38 +0.4 890,406 - Ga0059261_0849 0.38 -0.3 890,830 + -0.6 890,830 + -3.9 890,830 + +0.3 890,830 + +0.5 890,830 + -0.3 890,830 + -2.3 890,830 + +0.2 890,830 + +0.4 890,830 + +0.3 890,831 - +1.1 890,831 - +0.1 890,831 - +2.8 891,046 - Ga0059261_0850 0.51 -0.7 891,046 - Ga0059261_0850 0.51 +0.2 891,057 + Ga0059261_0850 0.53 -0.5 891,388 + Ga0059261_0851 0.14 -4.3 891,388 + Ga0059261_0851 0.14 -0.2 891,389 - Ga0059261_0851 0.14 -0.0 891,389 - Ga0059261_0851 0.14 -1.4 891,394 + Ga0059261_0851 0.14 +0.7 891,394 + Ga0059261_0851 0.14 -0.0 891,394 + Ga0059261_0851 0.14 +0.5 891,394 + Ga0059261_0851 0.14 +1.9 891,394 + Ga0059261_0851 0.14 -0.4 891,394 + Ga0059261_0851 0.14 +0.8 891,394 + Ga0059261_0851 0.14 +1.1 891,395 - Ga0059261_0851 0.15 -1.2 891,395 - Ga0059261_0851 0.15 -0.1 891,395 - Ga0059261_0851 0.15 -3.2 891,520 + Ga0059261_0851 0.28 -1.0 891,520 + Ga0059261_0851 0.28 -1.4 891,520 + Ga0059261_0851 0.28 +1.5 891,520 + Ga0059261_0851 0.28 +0.4 891,521 - Ga0059261_0851 0.28 +0.4 891,521 - Ga0059261_0851 0.28 +0.7 891,524 - Ga0059261_0851 0.28 -3.4 891,524 - Ga0059261_0851 0.28 +0.6 891,524 - Ga0059261_0851 0.28 -0.4 891,554 + Ga0059261_0851 0.31 -2.1 891,554 + Ga0059261_0851 0.31 +1.2 891,555 - Ga0059261_0851 0.31 +1.5 891,601 + Ga0059261_0851 0.36 -3.1 891,799 + Ga0059261_0851 0.57 +0.6 891,799 + Ga0059261_0851 0.57 -0.5 891,799 + Ga0059261_0851 0.57 -0.8 891,799 + Ga0059261_0851 0.57 +0.1 891,799 + Ga0059261_0851 0.57 +0.2 891,799 + Ga0059261_0851 0.57 +1.3 891,799 + Ga0059261_0851 0.57 -2.1 891,800 - Ga0059261_0851 0.57 +1.4 891,800 - Ga0059261_0851 0.57 +1.4 891,869 - Ga0059261_0851 0.64 -0.3 891,934 + Ga0059261_0851 0.71 +1.3 891,934 + Ga0059261_0851 0.71 +1.2 891,934 + Ga0059261_0851 0.71 -0.6 891,934 + Ga0059261_0851 0.71 +0.8 891,935 - Ga0059261_0851 0.71 -0.5 891,935 - Ga0059261_0851 0.71 -0.9 891,935 - Ga0059261_0851 0.71 -4.5 891,935 - Ga0059261_0851 0.71 +0.1 891,935 - Ga0059261_0851 0.71 -0.9 891,940 + Ga0059261_0851 0.71 -1.2 891,940 + Ga0059261_0851 0.71 +0.4 891,940 + Ga0059261_0851 0.71 -0.0 891,940 + Ga0059261_0851 0.71 +0.1 891,940 + Ga0059261_0851 0.71 -0.3 891,940 + Ga0059261_0851 0.71 +1.8 891,940 + Ga0059261_0851 0.71 +1.2 891,940 + Ga0059261_0851 0.71 +0.9 891,940 + Ga0059261_0851 0.71 -0.1 891,940 + Ga0059261_0851 0.71 +0.1 891,940 + Ga0059261_0851 0.71 -0.7 891,940 + Ga0059261_0851 0.71 -1.1 891,940 + Ga0059261_0851 0.71 -1.0 891,940 + Ga0059261_0851 0.71 +0.4 891,940 + Ga0059261_0851 0.71 +0.4 891,940 + Ga0059261_0851 0.71 -0.3 891,940 + Ga0059261_0851 0.71 +0.3 891,940 + Ga0059261_0851 0.71 +0.1 891,940 + Ga0059261_0851 0.71 +0.4 891,940 + Ga0059261_0851 0.71 +0.7 891,940 + Ga0059261_0851 0.71 +1.5 891,940 + Ga0059261_0851 0.71 -1.5 891,941 - Ga0059261_0851 0.71 +0.5 891,941 - Ga0059261_0851 0.71 +1.8 891,941 - Ga0059261_0851 0.71 +0.8 891,941 - Ga0059261_0851 0.71 +0.2 891,941 - Ga0059261_0851 0.71 +1.4 891,941 - Ga0059261_0851 0.71 -0.3 891,941 - Ga0059261_0851 0.71 -4.1 891,941 - Ga0059261_0851 0.71 +1.1 891,941 - Ga0059261_0851 0.71 -0.2 891,941 - Ga0059261_0851 0.71 -0.1 891,941 - Ga0059261_0851 0.71 -1.1 891,941 - Ga0059261_0851 0.71 +1.2 891,941 - Ga0059261_0851 0.71 +0.9 892,008 - Ga0059261_0851 0.78 -3.5 892,021 + Ga0059261_0851 0.80 -0.2 892,105 + Ga0059261_0851 0.89 +0.5 892,105 + Ga0059261_0851 0.89 +0.8 892,105 + Ga0059261_0851 0.89 -0.7 892,105 + Ga0059261_0851 0.89 +0.9 892,105 + Ga0059261_0851 0.89 +0.1 892,105 + Ga0059261_0851 0.89 +0.8 892,106 - Ga0059261_0851 0.89 -1.0 892,203 + +1.6 892,203 + +1.0 892,203 + -0.1 892,203 + -0.1 892,203 + -1.0 892,203 + -0.2 892,204 - +0.4 892,204 - -1.9 892,204 - -0.4 892,204 - +0.7 892,361 + -0.3 892,361 + -0.4 892,361 + -0.4 892,362 - -0.1 892,362 - -0.4 892,362 - +2.1 892,362 - +1.0 892,404 - +0.4 892,404 - +0.9 892,444 + -2.1 892,444 + -0.9 892,445 - +2.4 892,449 + -0.3 892,449 + +0.3 892,449 + +1.0 892,449 + +0.3 892,449 + -3.3 892,449 + +0.7 892,450 - +0.8 892,450 - +0.0 892,538 + +0.2 892,546 + -0.6 892,546 + -4.3 892,546 + +0.1 892,546 + +0.7 892,546 + -1.8 892,546 + -0.3 892,546 + +0.4 892,547 - -3.1 892,547 - -1.0 892,547 - +1.1 892,547 - +0.1 892,547 - +0.8 892,547 - -1.9 892,849 + Ga0059261_0852 0.73 -3.6 892,849 + Ga0059261_0852 0.73 -0.0 892,849 + Ga0059261_0852 0.73 -0.4 892,849 + Ga0059261_0852 0.73 +0.0 892,850 - Ga0059261_0852 0.73 -1.2 892,850 - Ga0059261_0852 0.73 +0.8 892,850 - Ga0059261_0852 0.73 -2.0 892,850 - Ga0059261_0852 0.73 +0.1 892,858 + Ga0059261_0852 0.74 -2.8 892,859 - Ga0059261_0852 0.75 -2.9 892,891 + Ga0059261_0852 0.81 -2.1 892,891 + Ga0059261_0852 0.81 -3.6 892,891 + Ga0059261_0852 0.81 -0.5 892,891 + Ga0059261_0852 0.81 -1.2 892,892 - Ga0059261_0852 0.82 -2.6 892,892 - Ga0059261_0852 0.82 +0.8 892,892 - Ga0059261_0852 0.82 +0.5 892,892 - Ga0059261_0852 0.82 -1.9 892,892 - Ga0059261_0852 0.82 +0.5 892,922 - Ga0059261_0852 0.88 -3.1 892,930 + Ga0059261_0852 0.90 +0.5 892,930 + Ga0059261_0852 0.90 -1.1 892,931 - Ga0059261_0852 0.90 -1.4 892,931 - Ga0059261_0852 0.90 +0.9 893,066 + +2.0 893,067 - -1.3 893,067 - +1.1 893,067 - +2.8 893,067 - -0.7 893,067 - +0.6 893,127 + -1.1 893,127 + +0.3 893,128 - -1.6 893,128 - +0.7
Or see this region's nucleotide sequence