Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17315 and AO356_17320 are separated by 810 nucleotides AO356_17320 and AO356_17325 are separated by 292 nucleotides
AO356_17315: AO356_17315 - GDP-mannose dehydrogenase, at 3,902,356 to 3,903,672
_17315
AO356_17320: AO356_17320 - hypothetical protein, at 3,904,483 to 3,905,262
_17320
AO356_17325: AO356_17325 - polysaccharide deacetylase, at 3,905,555 to 3,906,679
_17325
Position (kb)
3904
3905
3906 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3903.595 kb on + strand at 3903.596 kb on - strand at 3903.631 kb on + strand at 3903.631 kb on + strand at 3903.658 kb on + strand at 3903.664 kb on - strand at 3903.713 kb on + strand at 3903.716 kb on + strand at 3903.783 kb on + strand at 3903.836 kb on + strand at 3903.858 kb on + strand at 3903.858 kb on + strand at 3903.968 kb on - strand at 3903.970 kb on - strand at 3903.991 kb on + strand at 3904.001 kb on + strand at 3904.001 kb on + strand at 3904.002 kb on - strand at 3904.002 kb on - strand at 3904.002 kb on - strand at 3904.002 kb on - strand at 3904.002 kb on - strand at 3904.002 kb on - strand at 3904.026 kb on + strand at 3904.026 kb on + strand at 3904.027 kb on - strand at 3904.028 kb on + strand at 3904.082 kb on - strand at 3904.103 kb on - strand at 3904.115 kb on - strand at 3904.144 kb on + strand at 3904.275 kb on + strand at 3904.276 kb on - strand at 3904.276 kb on - strand at 3904.284 kb on + strand at 3904.285 kb on - strand at 3904.289 kb on - strand at 3904.423 kb on + strand at 3904.423 kb on + strand at 3904.424 kb on - strand at 3904.424 kb on - strand at 3904.424 kb on - strand at 3904.469 kb on + strand at 3904.469 kb on + strand at 3904.469 kb on + strand at 3904.469 kb on + strand at 3904.470 kb on - strand at 3904.470 kb on - strand at 3904.470 kb on - strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.471 kb on + strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.472 kb on - strand at 3904.643 kb on + strand, within AO356_17320 at 3904.643 kb on + strand, within AO356_17320 at 3904.643 kb on + strand, within AO356_17320 at 3904.661 kb on + strand, within AO356_17320 at 3904.739 kb on + strand, within AO356_17320 at 3904.739 kb on + strand, within AO356_17320 at 3904.739 kb on + strand, within AO356_17320 at 3904.739 kb on + strand, within AO356_17320 at 3904.740 kb on - strand, within AO356_17320 at 3904.740 kb on - strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.765 kb on + strand, within AO356_17320 at 3904.766 kb on - strand, within AO356_17320 at 3904.766 kb on - strand, within AO356_17320 at 3904.766 kb on - strand, within AO356_17320 at 3904.832 kb on + strand, within AO356_17320 at 3904.833 kb on - strand, within AO356_17320 at 3904.919 kb on + strand, within AO356_17320 at 3904.919 kb on + strand, within AO356_17320 at 3904.919 kb on + strand, within AO356_17320 at 3904.920 kb on - strand, within AO356_17320 at 3904.920 kb on - strand, within AO356_17320 at 3904.955 kb on + strand, within AO356_17320 at 3904.956 kb on - strand, within AO356_17320 at 3904.956 kb on - strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.000 kb on + strand, within AO356_17320 at 3905.001 kb on - strand, within AO356_17320 at 3905.101 kb on - strand, within AO356_17320 at 3905.183 kb on + strand, within AO356_17320 at 3905.183 kb on + strand, within AO356_17320 at 3905.184 kb on - strand, within AO356_17320 at 3905.226 kb on - strand at 3905.331 kb on + strand at 3905.331 kb on + strand at 3905.331 kb on + strand at 3905.331 kb on + strand at 3905.332 kb on - strand at 3905.332 kb on - strand at 3905.332 kb on - strand at 3905.332 kb on - strand at 3905.332 kb on - strand at 3905.500 kb on - strand at 3905.500 kb on - strand at 3905.500 kb on - strand at 3905.762 kb on + strand, within AO356_17325 at 3905.762 kb on + strand, within AO356_17325 at 3905.763 kb on - strand, within AO356_17325 at 3905.763 kb on - strand, within AO356_17325 at 3905.786 kb on - strand, within AO356_17325 at 3905.841 kb on - strand, within AO356_17325 at 3905.841 kb on - strand, within AO356_17325 at 3905.841 kb on - strand, within AO356_17325 at 3905.841 kb on - strand, within AO356_17325 at 3905.841 kb on - strand, within AO356_17325 at 3905.885 kb on + strand, within AO356_17325 at 3905.951 kb on + strand, within AO356_17325 at 3905.951 kb on + strand, within AO356_17325 at 3905.951 kb on + strand, within AO356_17325 at 3905.951 kb on + strand, within AO356_17325 at 3905.952 kb on - strand, within AO356_17325 at 3905.952 kb on - strand, within AO356_17325 at 3905.952 kb on - strand, within AO356_17325 at 3905.952 kb on - strand, within AO356_17325 at 3905.952 kb on - strand, within AO356_17325 at 3905.954 kb on + strand, within AO356_17325 at 3905.954 kb on + strand, within AO356_17325 at 3905.954 kb on + strand, within AO356_17325 at 3905.954 kb on + strand, within AO356_17325 at 3905.954 kb on + strand, within AO356_17325 at 3905.955 kb on - strand, within AO356_17325 at 3905.955 kb on - strand, within AO356_17325 at 3905.955 kb on - strand, within AO356_17325 at 3905.955 kb on - strand, within AO356_17325 at 3906.167 kb on + strand, within AO356_17325 at 3906.167 kb on + strand, within AO356_17325 at 3906.167 kb on + strand, within AO356_17325 at 3906.168 kb on - strand, within AO356_17325 at 3906.168 kb on - strand, within AO356_17325
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 3,903,595 + +0.5 3,903,596 - -0.1 3,903,631 + +0.2 3,903,631 + -1.1 3,903,658 + +1.3 3,903,664 - +0.5 3,903,713 + +0.1 3,903,716 + +1.0 3,903,783 + +0.3 3,903,836 + +1.6 3,903,858 + +0.3 3,903,858 + +0.1 3,903,968 - -0.2 3,903,970 - +0.1 3,903,991 + -1.0 3,904,001 + +0.5 3,904,001 + +0.4 3,904,002 - +0.9 3,904,002 - +0.1 3,904,002 - +0.5 3,904,002 - +0.9 3,904,002 - +0.6 3,904,002 - +0.3 3,904,026 + +0.5 3,904,026 + +0.1 3,904,027 - +0.7 3,904,028 + +1.0 3,904,082 - +1.6 3,904,103 - +0.6 3,904,115 - +1.0 3,904,144 + +0.5 3,904,275 + +0.3 3,904,276 - +0.3 3,904,276 - +1.5 3,904,284 + +0.7 3,904,285 - +0.3 3,904,289 - -0.1 3,904,423 + +0.4 3,904,423 + +0.5 3,904,424 - +0.1 3,904,424 - +0.5 3,904,424 - -0.3 3,904,469 + -0.3 3,904,469 + -0.2 3,904,469 + +0.0 3,904,469 + +1.3 3,904,470 - +0.7 3,904,470 - -0.1 3,904,470 - -2.3 3,904,471 + -0.6 3,904,471 + +0.4 3,904,471 + -0.1 3,904,471 + +0.0 3,904,471 + +0.9 3,904,471 + -0.9 3,904,471 + +0.9 3,904,471 + +0.2 3,904,472 - -0.3 3,904,472 - +0.6 3,904,472 - +0.3 3,904,472 - -0.9 3,904,472 - +0.5 3,904,472 - -0.6 3,904,472 - +0.4 3,904,472 - +0.4 3,904,472 - -0.4 3,904,472 - -0.1 3,904,643 + AO356_17320 0.21 +0.3 3,904,643 + AO356_17320 0.21 -0.1 3,904,643 + AO356_17320 0.21 -1.3 3,904,661 + AO356_17320 0.23 -0.2 3,904,739 + AO356_17320 0.33 -0.9 3,904,739 + AO356_17320 0.33 -0.4 3,904,739 + AO356_17320 0.33 +1.1 3,904,739 + AO356_17320 0.33 +1.1 3,904,740 - AO356_17320 0.33 -0.6 3,904,740 - AO356_17320 0.33 +0.5 3,904,765 + AO356_17320 0.36 +0.9 3,904,765 + AO356_17320 0.36 +0.7 3,904,765 + AO356_17320 0.36 +1.0 3,904,765 + AO356_17320 0.36 -0.1 3,904,765 + AO356_17320 0.36 -2.2 3,904,765 + AO356_17320 0.36 +1.1 3,904,766 - AO356_17320 0.36 +0.5 3,904,766 - AO356_17320 0.36 +0.9 3,904,766 - AO356_17320 0.36 +0.9 3,904,832 + AO356_17320 0.45 +0.9 3,904,833 - AO356_17320 0.45 +0.5 3,904,919 + AO356_17320 0.56 +0.2 3,904,919 + AO356_17320 0.56 +0.3 3,904,919 + AO356_17320 0.56 -0.0 3,904,920 - AO356_17320 0.56 -0.4 3,904,920 - AO356_17320 0.56 +0.1 3,904,955 + AO356_17320 0.61 +1.1 3,904,956 - AO356_17320 0.61 +0.1 3,904,956 - AO356_17320 0.61 +1.6 3,905,000 + AO356_17320 0.66 +1.6 3,905,000 + AO356_17320 0.66 -0.5 3,905,000 + AO356_17320 0.66 +0.4 3,905,000 + AO356_17320 0.66 +0.4 3,905,000 + AO356_17320 0.66 -0.3 3,905,000 + AO356_17320 0.66 +0.7 3,905,000 + AO356_17320 0.66 +1.1 3,905,001 - AO356_17320 0.66 +0.4 3,905,101 - AO356_17320 0.79 +0.2 3,905,183 + AO356_17320 0.90 +0.2 3,905,183 + AO356_17320 0.90 +0.6 3,905,184 - AO356_17320 0.90 -0.2 3,905,226 - +0.8 3,905,331 + +0.5 3,905,331 + +2.5 3,905,331 + +0.7 3,905,331 + -0.7 3,905,332 - +0.0 3,905,332 - +0.3 3,905,332 - -0.2 3,905,332 - +0.4 3,905,332 - -1.0 3,905,500 - -0.3 3,905,500 - +0.5 3,905,500 - -0.0 3,905,762 + AO356_17325 0.18 -0.2 3,905,762 + AO356_17325 0.18 -1.4 3,905,763 - AO356_17325 0.18 -0.6 3,905,763 - AO356_17325 0.18 +0.1 3,905,786 - AO356_17325 0.21 +0.5 3,905,841 - AO356_17325 0.25 +0.1 3,905,841 - AO356_17325 0.25 +1.1 3,905,841 - AO356_17325 0.25 +0.4 3,905,841 - AO356_17325 0.25 -0.3 3,905,841 - AO356_17325 0.25 +0.7 3,905,885 + AO356_17325 0.29 -0.6 3,905,951 + AO356_17325 0.35 -0.5 3,905,951 + AO356_17325 0.35 -0.2 3,905,951 + AO356_17325 0.35 -0.7 3,905,951 + AO356_17325 0.35 +0.0 3,905,952 - AO356_17325 0.35 -0.1 3,905,952 - AO356_17325 0.35 +0.3 3,905,952 - AO356_17325 0.35 +0.3 3,905,952 - AO356_17325 0.35 -0.9 3,905,952 - AO356_17325 0.35 +0.2 3,905,954 + AO356_17325 0.35 +0.3 3,905,954 + AO356_17325 0.35 +0.5 3,905,954 + AO356_17325 0.35 +1.5 3,905,954 + AO356_17325 0.35 +1.0 3,905,954 + AO356_17325 0.35 +0.9 3,905,955 - AO356_17325 0.36 +0.7 3,905,955 - AO356_17325 0.36 +1.2 3,905,955 - AO356_17325 0.36 +0.5 3,905,955 - AO356_17325 0.36 +1.1 3,906,167 + AO356_17325 0.54 +0.5 3,906,167 + AO356_17325 0.54 +0.9 3,906,167 + AO356_17325 0.54 +0.3 3,906,168 - AO356_17325 0.54 +0.9 3,906,168 - AO356_17325 0.54 +0.2
Or see this region's nucleotide sequence