Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10600

Experiment: Adenine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_10595 and AO356_10600 overlap by 4 nucleotidesAO356_10600 and AO356_10605 are separated by 10 nucleotides AO356_10595: AO356_10595 - mangotoxin biosynthesis-involved protein MgoB, at 2,410,804 to 2,411,580 _10595 AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509 _10600 AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086 _10605 Position (kb) 2411 2412 2413Strain fitness (log2 ratio) -1 0 1at 2410.644 kb on + strandat 2410.687 kb on + strandat 2410.697 kb on + strandat 2410.754 kb on + strandat 2410.903 kb on - strand, within AO356_10595at 2411.095 kb on + strand, within AO356_10595at 2411.095 kb on + strand, within AO356_10595at 2411.095 kb on + strand, within AO356_10595at 2411.095 kb on + strand, within AO356_10595at 2411.096 kb on - strand, within AO356_10595at 2411.096 kb on - strand, within AO356_10595at 2411.378 kb on - strand, within AO356_10595at 2411.380 kb on + strand, within AO356_10595at 2411.380 kb on + strand, within AO356_10595at 2411.380 kb on + strand, within AO356_10595at 2411.380 kb on + strand, within AO356_10595at 2411.380 kb on + strand, within AO356_10595at 2411.381 kb on - strand, within AO356_10595at 2411.381 kb on - strand, within AO356_10595at 2411.381 kb on - strand, within AO356_10595at 2411.593 kb on - strandat 2411.593 kb on - strandat 2411.637 kb on - strandat 2411.769 kb on + strand, within AO356_10600at 2411.769 kb on + strand, within AO356_10600at 2411.910 kb on + strand, within AO356_10600at 2412.208 kb on + strand, within AO356_10600at 2412.208 kb on + strand, within AO356_10600at 2412.208 kb on + strand, within AO356_10600at 2412.208 kb on + strand, within AO356_10600at 2412.209 kb on - strand, within AO356_10600at 2412.216 kb on + strand, within AO356_10600at 2412.216 kb on + strand, within AO356_10600at 2412.285 kb on + strand, within AO356_10600at 2412.286 kb on - strand, within AO356_10600at 2412.394 kb on - strand, within AO356_10600at 2412.476 kb on - strandat 2412.495 kb on + strandat 2412.841 kb on - strandat 2413.123 kb on + strand, within AO356_10605at 2413.124 kb on - strand, within AO356_10605at 2413.196 kb on + strand, within AO356_10605at 2413.196 kb on + strand, within AO356_10605at 2413.197 kb on - strand, within AO356_10605at 2413.197 kb on - strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.382 kb on + strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.383 kb on - strand, within AO356_10605at 2413.385 kb on - strand, within AO356_10605at 2413.424 kb on - strand, within AO356_10605at 2413.424 kb on - strand, within AO356_10605

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine (N)
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2,410,644 + -0.6
2,410,687 + +0.4
2,410,697 + -0.7
2,410,754 + -0.5
2,410,903 - AO356_10595 0.13 -0.3
2,411,095 + AO356_10595 0.37 +0.2
2,411,095 + AO356_10595 0.37 +0.3
2,411,095 + AO356_10595 0.37 -0.2
2,411,095 + AO356_10595 0.37 +1.3
2,411,096 - AO356_10595 0.38 +0.4
2,411,096 - AO356_10595 0.38 +0.1
2,411,378 - AO356_10595 0.74 +1.2
2,411,380 + AO356_10595 0.74 -1.5
2,411,380 + AO356_10595 0.74 +0.4
2,411,380 + AO356_10595 0.74 +0.1
2,411,380 + AO356_10595 0.74 +0.3
2,411,380 + AO356_10595 0.74 +0.9
2,411,381 - AO356_10595 0.74 -0.0
2,411,381 - AO356_10595 0.74 +1.2
2,411,381 - AO356_10595 0.74 -0.1
2,411,593 - -0.2
2,411,593 - +0.3
2,411,637 - +0.4
2,411,769 + AO356_10600 0.21 +0.1
2,411,769 + AO356_10600 0.21 +0.8
2,411,910 + AO356_10600 0.36 +0.5
2,412,208 + AO356_10600 0.68 -0.4
2,412,208 + AO356_10600 0.68 +0.3
2,412,208 + AO356_10600 0.68 +0.2
2,412,208 + AO356_10600 0.68 +0.8
2,412,209 - AO356_10600 0.68 +0.2
2,412,216 + AO356_10600 0.68 +0.5
2,412,216 + AO356_10600 0.68 -0.9
2,412,285 + AO356_10600 0.76 +1.6
2,412,286 - AO356_10600 0.76 +0.9
2,412,394 - AO356_10600 0.88 +0.5
2,412,476 - -0.1
2,412,495 + -0.8
2,412,841 - -0.2
2,413,123 + AO356_10605 0.17 +0.8
2,413,124 - AO356_10605 0.17 +0.1
2,413,196 + AO356_10605 0.19 +1.3
2,413,196 + AO356_10605 0.19 +0.1
2,413,197 - AO356_10605 0.19 +0.0
2,413,197 - AO356_10605 0.19 -0.4
2,413,382 + AO356_10605 0.24 -1.0
2,413,382 + AO356_10605 0.24 +0.6
2,413,382 + AO356_10605 0.24 -0.5
2,413,382 + AO356_10605 0.24 +0.0
2,413,382 + AO356_10605 0.24 -0.1
2,413,382 + AO356_10605 0.24 +0.3
2,413,382 + AO356_10605 0.24 +0.0
2,413,382 + AO356_10605 0.24 -0.4
2,413,383 - AO356_10605 0.24 +0.2
2,413,383 - AO356_10605 0.24 +0.2
2,413,383 - AO356_10605 0.24 -0.1
2,413,383 - AO356_10605 0.24 -0.6
2,413,383 - AO356_10605 0.24 +1.0
2,413,383 - AO356_10605 0.24 +0.7
2,413,383 - AO356_10605 0.24 -0.2
2,413,383 - AO356_10605 0.24 -1.6
2,413,383 - AO356_10605 0.24 +0.3
2,413,383 - AO356_10605 0.24 -0.1
2,413,385 - AO356_10605 0.24 -0.1
2,413,424 - AO356_10605 0.25 +0.7
2,413,424 - AO356_10605 0.25 +0.1

Or see this region's nucleotide sequence