Experiment: 7 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2968 and DvMF_2969 are separated by 318 nucleotides DvMF_2969 and DvMF_2970 overlap by 4 nucleotides DvMF_2970 and DvMF_2971 overlap by 4 nucleotides
DvMF_2968: DvMF_2968 - extracellular solute-binding protein family 1 (RefSeq), at 3,743,181 to 3,744,251
_2968
DvMF_2969: DvMF_2969 - ABC transporter related (RefSeq), at 3,744,570 to 3,745,826
_2969
DvMF_2970: DvMF_2970 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,745,823 to 3,746,728
_2970
DvMF_2971: DvMF_2971 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,746,725 to 3,747,585
_2971
Position (kb)
3744
3745
3746 Strain fitness (log2 ratio)
-1
0
1
2 at 3743.622 kb on + strand, within DvMF_2968 at 3743.728 kb on + strand, within DvMF_2968 at 3744.104 kb on - strand, within DvMF_2968 at 3744.555 kb on + strand at 3744.566 kb on - strand at 3744.679 kb on - strand at 3744.731 kb on - strand, within DvMF_2969 at 3744.804 kb on - strand, within DvMF_2969 at 3744.939 kb on + strand, within DvMF_2969 at 3744.992 kb on - strand, within DvMF_2969 at 3744.992 kb on - strand, within DvMF_2969 at 3745.136 kb on + strand, within DvMF_2969 at 3745.502 kb on + strand, within DvMF_2969 at 3745.640 kb on + strand, within DvMF_2969 at 3745.954 kb on + strand, within DvMF_2970 at 3745.974 kb on - strand, within DvMF_2970 at 3746.035 kb on - strand, within DvMF_2970 at 3746.037 kb on + strand, within DvMF_2970 at 3746.114 kb on - strand, within DvMF_2970 at 3746.344 kb on + strand, within DvMF_2970 at 3746.360 kb on - strand, within DvMF_2970 at 3746.362 kb on + strand, within DvMF_2970 at 3746.397 kb on + strand, within DvMF_2970 at 3746.444 kb on - strand, within DvMF_2970 at 3746.644 kb on - strand at 3746.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7 day starvation, 37C remove 3,743,622 + DvMF_2968 0.41 +0.6 3,743,728 + DvMF_2968 0.51 +0.8 3,744,104 - DvMF_2968 0.86 +0.6 3,744,555 + +0.4 3,744,566 - +1.1 3,744,679 - +0.2 3,744,731 - DvMF_2969 0.13 +0.6 3,744,804 - DvMF_2969 0.19 +2.3 3,744,939 + DvMF_2969 0.29 +2.3 3,744,992 - DvMF_2969 0.34 +0.3 3,744,992 - DvMF_2969 0.34 +0.7 3,745,136 + DvMF_2969 0.45 +0.6 3,745,502 + DvMF_2969 0.74 +1.2 3,745,640 + DvMF_2969 0.85 +1.0 3,745,954 + DvMF_2970 0.14 +0.2 3,745,974 - DvMF_2970 0.17 +0.7 3,746,035 - DvMF_2970 0.23 -0.1 3,746,037 + DvMF_2970 0.24 +0.9 3,746,114 - DvMF_2970 0.32 -0.4 3,746,344 + DvMF_2970 0.58 +0.3 3,746,360 - DvMF_2970 0.59 +2.0 3,746,362 + DvMF_2970 0.59 +0.5 3,746,397 + DvMF_2970 0.63 +0.2 3,746,444 - DvMF_2970 0.69 -0.0 3,746,644 - +1.0 3,746,715 + +0.8
Or see this region's nucleotide sequence