Experiment: Fluorophosphate 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1569 and Pf6N2E2_1570 overlap by 22 nucleotides Pf6N2E2_1570 and Pf6N2E2_1571 are separated by 10 nucleotides
Pf6N2E2_1569 - FIG00957800: hypothetical protein, at 1,831,410 to 1,832,855
_1569
Pf6N2E2_1570 - Sll1359 protein, at 1,832,834 to 1,833,976
_1570
Pf6N2E2_1571 - FIG00966665: hypothetical protein, at 1,833,987 to 1,836,371
_1571
Position (kb)
1832
1833
1834 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1831.836 kb on + strand, within Pf6N2E2_1569 at 1831.836 kb on + strand, within Pf6N2E2_1569 at 1831.837 kb on - strand, within Pf6N2E2_1569 at 1831.998 kb on + strand, within Pf6N2E2_1569 at 1831.998 kb on + strand, within Pf6N2E2_1569 at 1832.065 kb on + strand, within Pf6N2E2_1569 at 1832.298 kb on + strand, within Pf6N2E2_1569 at 1832.298 kb on + strand, within Pf6N2E2_1569 at 1832.298 kb on + strand, within Pf6N2E2_1569 at 1832.299 kb on - strand, within Pf6N2E2_1569 at 1832.299 kb on - strand, within Pf6N2E2_1569 at 1832.299 kb on - strand, within Pf6N2E2_1569 at 1832.299 kb on - strand, within Pf6N2E2_1569 at 1832.375 kb on + strand, within Pf6N2E2_1569 at 1832.461 kb on - strand, within Pf6N2E2_1569 at 1832.463 kb on + strand, within Pf6N2E2_1569 at 1832.463 kb on + strand, within Pf6N2E2_1569 at 1832.463 kb on + strand, within Pf6N2E2_1569 at 1832.464 kb on - strand, within Pf6N2E2_1569 at 1832.464 kb on - strand, within Pf6N2E2_1569 at 1832.464 kb on - strand, within Pf6N2E2_1569 at 1832.467 kb on - strand, within Pf6N2E2_1569 at 1832.628 kb on + strand, within Pf6N2E2_1569 at 1832.629 kb on - strand, within Pf6N2E2_1569 at 1832.629 kb on - strand, within Pf6N2E2_1569 at 1832.918 kb on - strand at 1833.077 kb on + strand, within Pf6N2E2_1570 at 1833.108 kb on - strand, within Pf6N2E2_1570 at 1833.108 kb on - strand, within Pf6N2E2_1570 at 1833.164 kb on - strand, within Pf6N2E2_1570 at 1833.187 kb on + strand, within Pf6N2E2_1570 at 1833.270 kb on + strand, within Pf6N2E2_1570 at 1833.308 kb on + strand, within Pf6N2E2_1570 at 1833.329 kb on + strand, within Pf6N2E2_1570 at 1833.461 kb on + strand, within Pf6N2E2_1570 at 1833.462 kb on - strand, within Pf6N2E2_1570 at 1833.476 kb on + strand, within Pf6N2E2_1570 at 1833.476 kb on + strand, within Pf6N2E2_1570 at 1833.477 kb on - strand, within Pf6N2E2_1570 at 1833.497 kb on - strand, within Pf6N2E2_1570 at 1833.500 kb on + strand, within Pf6N2E2_1570 at 1833.512 kb on + strand, within Pf6N2E2_1570 at 1833.513 kb on - strand, within Pf6N2E2_1570 at 1833.596 kb on - strand, within Pf6N2E2_1570 at 1833.596 kb on - strand, within Pf6N2E2_1570 at 1833.599 kb on + strand, within Pf6N2E2_1570 at 1833.599 kb on + strand, within Pf6N2E2_1570 at 1833.599 kb on + strand, within Pf6N2E2_1570 at 1833.599 kb on + strand, within Pf6N2E2_1570 at 1833.600 kb on - strand, within Pf6N2E2_1570 at 1833.600 kb on - strand, within Pf6N2E2_1570 at 1833.600 kb on - strand, within Pf6N2E2_1570 at 1833.600 kb on - strand, within Pf6N2E2_1570 at 1833.714 kb on - strand, within Pf6N2E2_1570 at 1833.754 kb on - strand, within Pf6N2E2_1570 at 1833.995 kb on - strand at 1834.011 kb on - strand at 1834.015 kb on - strand at 1834.015 kb on - strand at 1834.028 kb on + strand at 1834.029 kb on - strand at 1834.029 kb on - strand at 1834.029 kb on - strand at 1834.068 kb on + strand at 1834.078 kb on - strand at 1834.203 kb on + strand at 1834.204 kb on - strand at 1834.204 kb on - strand at 1834.206 kb on - strand at 1834.206 kb on - strand at 1834.206 kb on - strand at 1834.206 kb on - strand at 1834.206 kb on - strand at 1834.216 kb on + strand at 1834.248 kb on + strand, within Pf6N2E2_1571 at 1834.248 kb on + strand, within Pf6N2E2_1571 at 1834.248 kb on + strand, within Pf6N2E2_1571 at 1834.248 kb on + strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.249 kb on - strand, within Pf6N2E2_1571 at 1834.303 kb on - strand, within Pf6N2E2_1571 at 1834.303 kb on - strand, within Pf6N2E2_1571 at 1834.303 kb on - strand, within Pf6N2E2_1571 at 1834.353 kb on + strand, within Pf6N2E2_1571 at 1834.354 kb on - strand, within Pf6N2E2_1571 at 1834.354 kb on - strand, within Pf6N2E2_1571 at 1834.479 kb on + strand at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.593 kb on + strand, within Pf6N2E2_1571 at 1834.594 kb on - strand, within Pf6N2E2_1571 at 1834.594 kb on - strand, within Pf6N2E2_1571 at 1834.594 kb on - strand, within Pf6N2E2_1571 at 1834.594 kb on - strand, within Pf6N2E2_1571 at 1834.594 kb on - strand, within Pf6N2E2_1571 at 1834.731 kb on + strand, within Pf6N2E2_1571 at 1834.732 kb on - strand, within Pf6N2E2_1571 at 1834.777 kb on - strand, within Pf6N2E2_1571 at 1834.777 kb on - strand, within Pf6N2E2_1571 at 1834.969 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fluorophosphate 0.125 M remove 1,831,836 + Pf6N2E2_1569 0.29 +1.3 1,831,836 + Pf6N2E2_1569 0.29 +0.2 1,831,837 - Pf6N2E2_1569 0.30 -0.0 1,831,998 + Pf6N2E2_1569 0.41 +0.1 1,831,998 + Pf6N2E2_1569 0.41 +0.7 1,832,065 + Pf6N2E2_1569 0.45 -0.5 1,832,298 + Pf6N2E2_1569 0.61 -0.1 1,832,298 + Pf6N2E2_1569 0.61 -1.8 1,832,298 + Pf6N2E2_1569 0.61 +0.3 1,832,299 - Pf6N2E2_1569 0.61 -0.7 1,832,299 - Pf6N2E2_1569 0.61 -0.5 1,832,299 - Pf6N2E2_1569 0.61 -2.3 1,832,299 - Pf6N2E2_1569 0.61 +0.1 1,832,375 + Pf6N2E2_1569 0.67 +0.7 1,832,461 - Pf6N2E2_1569 0.73 -0.1 1,832,463 + Pf6N2E2_1569 0.73 +0.5 1,832,463 + Pf6N2E2_1569 0.73 +0.2 1,832,463 + Pf6N2E2_1569 0.73 +1.1 1,832,464 - Pf6N2E2_1569 0.73 +0.9 1,832,464 - Pf6N2E2_1569 0.73 -0.2 1,832,464 - Pf6N2E2_1569 0.73 -1.1 1,832,467 - Pf6N2E2_1569 0.73 -0.3 1,832,628 + Pf6N2E2_1569 0.84 +0.1 1,832,629 - Pf6N2E2_1569 0.84 +0.6 1,832,629 - Pf6N2E2_1569 0.84 +0.0 1,832,918 - -0.2 1,833,077 + Pf6N2E2_1570 0.21 +0.0 1,833,108 - Pf6N2E2_1570 0.24 -0.2 1,833,108 - Pf6N2E2_1570 0.24 +0.6 1,833,164 - Pf6N2E2_1570 0.29 +0.3 1,833,187 + Pf6N2E2_1570 0.31 +0.6 1,833,270 + Pf6N2E2_1570 0.38 +1.6 1,833,308 + Pf6N2E2_1570 0.41 +0.8 1,833,329 + Pf6N2E2_1570 0.43 +1.3 1,833,461 + Pf6N2E2_1570 0.55 +0.9 1,833,462 - Pf6N2E2_1570 0.55 +1.8 1,833,476 + Pf6N2E2_1570 0.56 +1.8 1,833,476 + Pf6N2E2_1570 0.56 +0.3 1,833,477 - Pf6N2E2_1570 0.56 +0.1 1,833,497 - Pf6N2E2_1570 0.58 -1.4 1,833,500 + Pf6N2E2_1570 0.58 +0.0 1,833,512 + Pf6N2E2_1570 0.59 +0.6 1,833,513 - Pf6N2E2_1570 0.59 +1.7 1,833,596 - Pf6N2E2_1570 0.67 -1.2 1,833,596 - Pf6N2E2_1570 0.67 +0.3 1,833,599 + Pf6N2E2_1570 0.67 +0.4 1,833,599 + Pf6N2E2_1570 0.67 -0.8 1,833,599 + Pf6N2E2_1570 0.67 -1.1 1,833,599 + Pf6N2E2_1570 0.67 +1.0 1,833,600 - Pf6N2E2_1570 0.67 +0.3 1,833,600 - Pf6N2E2_1570 0.67 +2.1 1,833,600 - Pf6N2E2_1570 0.67 -1.9 1,833,600 - Pf6N2E2_1570 0.67 -0.7 1,833,714 - Pf6N2E2_1570 0.77 -1.1 1,833,754 - Pf6N2E2_1570 0.80 +0.2 1,833,995 - -0.7 1,834,011 - -1.0 1,834,015 - +1.2 1,834,015 - -0.1 1,834,028 + -1.2 1,834,029 - -0.2 1,834,029 - +0.3 1,834,029 - +0.8 1,834,068 + -0.7 1,834,078 - +0.7 1,834,203 + -0.4 1,834,204 - +1.0 1,834,204 - +0.0 1,834,206 - +1.7 1,834,206 - -0.6 1,834,206 - +1.6 1,834,206 - -0.2 1,834,206 - +2.7 1,834,216 + +0.4 1,834,248 + Pf6N2E2_1571 0.11 -0.5 1,834,248 + Pf6N2E2_1571 0.11 -0.8 1,834,248 + Pf6N2E2_1571 0.11 +0.3 1,834,248 + Pf6N2E2_1571 0.11 -0.5 1,834,249 - Pf6N2E2_1571 0.11 -1.4 1,834,249 - Pf6N2E2_1571 0.11 +1.1 1,834,249 - Pf6N2E2_1571 0.11 -0.9 1,834,249 - Pf6N2E2_1571 0.11 +0.6 1,834,249 - Pf6N2E2_1571 0.11 +1.8 1,834,249 - Pf6N2E2_1571 0.11 +0.5 1,834,303 - Pf6N2E2_1571 0.13 +0.7 1,834,303 - Pf6N2E2_1571 0.13 +0.3 1,834,303 - Pf6N2E2_1571 0.13 +0.1 1,834,353 + Pf6N2E2_1571 0.15 -0.2 1,834,354 - Pf6N2E2_1571 0.15 +1.1 1,834,354 - Pf6N2E2_1571 0.15 +0.2 1,834,479 + +1.3 1,834,593 + Pf6N2E2_1571 0.25 -0.4 1,834,593 + Pf6N2E2_1571 0.25 -0.2 1,834,593 + Pf6N2E2_1571 0.25 -0.2 1,834,593 + Pf6N2E2_1571 0.25 -0.1 1,834,593 + Pf6N2E2_1571 0.25 -1.7 1,834,593 + Pf6N2E2_1571 0.25 +1.1 1,834,594 - Pf6N2E2_1571 0.25 +0.8 1,834,594 - Pf6N2E2_1571 0.25 +0.1 1,834,594 - Pf6N2E2_1571 0.25 +1.1 1,834,594 - Pf6N2E2_1571 0.25 +1.7 1,834,594 - Pf6N2E2_1571 0.25 -0.0 1,834,731 + Pf6N2E2_1571 0.31 +0.3 1,834,732 - Pf6N2E2_1571 0.31 +1.3 1,834,777 - Pf6N2E2_1571 0.33 +0.9 1,834,777 - Pf6N2E2_1571 0.33 +1.3 1,834,969 + -0.2
Or see this region's nucleotide sequence