Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4056

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
4,182,370	+		Ga0059261_4055	0.79	-0.2
4,182,371	-		Ga0059261_4055	0.79	-4.0
4,182,371	-		Ga0059261_4055	0.79	-0.9
4,182,391	+		Ga0059261_4055	0.81	+0.1
4,182,544	+				-0.3
4,182,544	+				-1.0
4,182,544	+				-1.3
4,182,545	-				-0.3
4,182,728	+				+0.3
4,182,767	+				+0.4
4,182,767	+				+1.9
4,182,821	-				-2.7
4,182,863	+				+0.1
4,182,863	+				+0.2
4,182,863	+				+0.8
4,182,863	+				-1.2
4,182,863	+				+0.4
4,182,864	-				-1.7
4,182,864	-				-1.2
4,182,864	-				-0.0
4,182,864	-				-1.5
4,182,911	-				-1.2
4,182,956	-				-2.0
4,182,956	-				-0.8
4,182,962	+				+0.4
4,182,962	+				-1.6
4,182,966	-				+2.3
4,183,040	+				+0.3
4,183,129	-				-3.2
4,183,156	-				+0.3
4,183,156	-				-0.6
4,183,156	-				-2.6
4,183,156	-				-0.3
4,183,156	-				+0.2
4,183,276	+				+0.3
4,183,276	+				+0.3
4,183,281	+				-0.1
4,183,281	+				-0.5
4,183,281	+				-4.2
4,183,281	+				-0.2
4,183,281	+				-2.8
4,183,281	+				+0.1
4,183,281	+				+0.7
4,183,282	-				-1.8
4,183,282	-				+0.4
4,183,375	+				-2.5
4,183,376	-				-0.5
4,183,431	+				-2.9
4,183,459	+				-4.2
4,183,459	+				-0.6
4,183,459	+				-1.3
4,183,460	-				-0.8
4,183,885	+		Ga0059261_4056	0.32	-1.0
4,183,885	+		Ga0059261_4056	0.32	-2.0
4,183,885	+		Ga0059261_4056	0.32	-3.1
4,183,885	+		Ga0059261_4056	0.32	-1.1
4,183,885	+		Ga0059261_4056	0.32	-0.4
4,183,886	-		Ga0059261_4056	0.32	-3.9
4,183,886	-		Ga0059261_4056	0.32	-3.3
4,183,886	-		Ga0059261_4056	0.32	-3.3
4,183,886	-		Ga0059261_4056	0.32	-2.9
4,183,886	-		Ga0059261_4056	0.32	-2.9
4,183,886	-		Ga0059261_4056	0.32	-2.2
4,183,886	-		Ga0059261_4056	0.32	-1.2
4,183,886	-		Ga0059261_4056	0.32	+0.8
4,183,886	-		Ga0059261_4056	0.32	-1.7
4,183,886	-		Ga0059261_4056	0.32	-4.3
4,183,886	-		Ga0059261_4056	0.32	-0.2
4,183,886	-		Ga0059261_4056	0.32	+0.3
4,183,887	+		Ga0059261_4056	0.32	-0.8
4,183,887	+		Ga0059261_4056	0.32	-0.7
4,183,887	+		Ga0059261_4056	0.32	-2.7
4,183,887	+		Ga0059261_4056	0.32	-2.8
4,184,083	+		Ga0059261_4056	0.43	-0.8
4,184,083	+		Ga0059261_4056	0.43	-1.8
4,184,083	+		Ga0059261_4056	0.43	-0.1
4,184,083	+		Ga0059261_4056	0.43	+0.3
4,184,083	+		Ga0059261_4056	0.43	-0.8
4,184,083	+		Ga0059261_4056	0.43	-3.7
4,184,083	+		Ga0059261_4056	0.43	-2.0
4,184,083	+		Ga0059261_4056	0.43	-1.8
4,184,083	+		Ga0059261_4056	0.43	-2.4
4,184,083	+		Ga0059261_4056	0.43	-1.1
4,184,083	+		Ga0059261_4056	0.43	-3.2
4,184,083	+		Ga0059261_4056	0.43	+0.2
4,184,083	+		Ga0059261_4056	0.43	-1.8
4,184,084	-		Ga0059261_4056	0.43	-0.6
4,184,084	-		Ga0059261_4056	0.43	-1.8
4,184,084	-		Ga0059261_4056	0.43	+1.2
4,184,084	-		Ga0059261_4056	0.43	-2.5
4,184,084	-		Ga0059261_4056	0.43	-0.1
4,184,084	-		Ga0059261_4056	0.43	-0.4
4,184,084	-		Ga0059261_4056	0.43	-1.4
4,184,314	+		Ga0059261_4056	0.55	-3.0
4,184,314	+		Ga0059261_4056	0.55	-1.5
4,184,314	+		Ga0059261_4056	0.55	-0.5
4,184,315	-		Ga0059261_4056	0.55	-0.2
4,184,434	+		Ga0059261_4056	0.61	+1.9
4,184,434	+		Ga0059261_4056	0.61	-0.9
4,184,434	+		Ga0059261_4056	0.61	-2.2
4,184,435	-		Ga0059261_4056	0.61	-1.2
4,184,435	-		Ga0059261_4056	0.61	-1.9
4,184,435	-		Ga0059261_4056	0.61	-1.8
4,184,473	-		Ga0059261_4056	0.63	-1.7
4,184,515	+		Ga0059261_4056	0.66	-1.7
4,184,515	+				+0.2
4,184,516	-		Ga0059261_4056	0.66	+0.7
4,184,680	+		Ga0059261_4056	0.74	-1.6
4,184,680	+		Ga0059261_4056	0.74	-0.7
4,184,680	+		Ga0059261_4056	0.74	-0.9
4,184,681	-		Ga0059261_4056	0.74	-2.7
4,184,681	-		Ga0059261_4056	0.74	-3.8
4,184,681	-		Ga0059261_4056	0.74	-2.2
4,184,681	-		Ga0059261_4056	0.74	-0.1
4,184,681	-		Ga0059261_4056	0.74	-1.6
4,184,681	-		Ga0059261_4056	0.74	-1.2
4,184,681	-		Ga0059261_4056	0.74	-0.8
4,184,839	+		Ga0059261_4056	0.83	-2.9
4,184,840	-		Ga0059261_4056	0.83	-0.6
4,185,196	+				-0.2
4,185,196	+				-0.5
4,185,196	+				-0.1
4,185,196	+				+1.5
4,185,196	+				-1.5
4,185,196	+				-0.7
4,185,196	+				+1.5
4,185,196	+				-0.5
4,185,196	+				-0.1
4,185,197	-				+0.3
4,185,197	-				+0.8
4,185,197	-				-0.5
4,185,197	-				-0.9
4,185,197	-				+0.2
4,185,197	-				+1.4
4,185,197	-				-2.4
4,185,197	-				-0.0
4,185,197	-				-0.7
4,185,197	-				-1.1
4,185,197	-				+0.1
4,185,213	+				-1.9
4,185,213	+				+0.1
4,185,214	-				-0.7
4,185,214	-				+0.7
4,185,235	+				-1.2
4,185,236	-				-0.1
4,185,236	-				+1.6
4,185,400	+				+2.1
4,185,401	-		Ga0059261_4057	0.24	-1.0
4,185,401	-		Ga0059261_4057	0.24	-1.6
4,185,401	-		Ga0059261_4057	0.24	-0.4
4,185,706	+		Ga0059261_4057	0.63	+1.2
4,185,706	+		Ga0059261_4057	0.63	-0.1
4,185,706	+		Ga0059261_4057	0.63	+0.4
4,185,706	+		Ga0059261_4057	0.63	+0.0
4,185,706	+		Ga0059261_4057	0.63	-1.0
4,185,706	+		Ga0059261_4057	0.63	-0.7
4,185,707	-		Ga0059261_4057	0.63	+0.4
4,185,707	-		Ga0059261_4057	0.63	-0.2
4,185,707	-		Ga0059261_4057	0.63	-0.0
4,185,806	+		Ga0059261_4057	0.76	+0.7
4,185,847	+		Ga0059261_4057	0.81	+0.7
4,185,847	+		Ga0059261_4057	0.81	+1.4
4,185,847	+		Ga0059261_4057	0.81	-1.5
4,185,848	-		Ga0059261_4057	0.81	+0.8
4,185,848	-		Ga0059261_4057	0.81	+0.1
4,185,848	-		Ga0059261_4057	0.81	+1.3
4,185,955	-				-0.9
4,186,013	+				+1.1
4,186,014	-				+0.2
4,186,014	-				-0.4
4,186,028	+				-0.1
4,186,029	-				-0.3
4,186,154	+		Ga0059261_4058	0.42	+1.8
4,186,155	-		Ga0059261_4058	0.42	+0.2
4,186,155	-		Ga0059261_4058	0.42	+1.1