Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3893

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
4,003,692	+		Ga0059261_3892	0.18	-1.0
4,003,692	+		Ga0059261_3892	0.18	-2.5
4,003,693	-		Ga0059261_3892	0.18	-0.1
4,003,693	-		Ga0059261_3892	0.18	-0.3
4,003,693	-		Ga0059261_3892	0.18	-0.6
4,003,767	+		Ga0059261_3892	0.25	+0.5
4,003,767	+		Ga0059261_3892	0.25	-1.2
4,003,767	+		Ga0059261_3892	0.25	+0.5
4,003,767	+		Ga0059261_3892	0.25	+0.5
4,003,768	-		Ga0059261_3892	0.25	-0.1
4,003,768	-		Ga0059261_3892	0.25	+0.3
4,003,768	-		Ga0059261_3892	0.25	-0.1
4,003,768	-		Ga0059261_3892	0.25	+1.6
4,003,768	-		Ga0059261_3892	0.25	-0.2
4,003,768	-		Ga0059261_3892	0.25	-1.5
4,003,872	+		Ga0059261_3892	0.35	+0.8
4,003,872	+		Ga0059261_3892	0.35	+0.6
4,003,872	+		Ga0059261_3892	0.35	+1.3
4,003,872	+		Ga0059261_3892	0.35	-1.5
4,003,872	+		Ga0059261_3892	0.35	-2.2
4,003,872	+		Ga0059261_3892	0.35	+0.7
4,003,872	+		Ga0059261_3892	0.35	-1.1
4,003,872	+		Ga0059261_3892	0.35	-0.3
4,003,873	-		Ga0059261_3892	0.35	-1.4
4,003,873	-		Ga0059261_3892	0.35	+0.4
4,003,873	-		Ga0059261_3892	0.35	-0.5
4,003,873	-		Ga0059261_3892	0.35	+0.3
4,003,873	-		Ga0059261_3892	0.35	+1.1
4,003,873	-		Ga0059261_3892	0.35	-0.1
4,003,873	-		Ga0059261_3892	0.35	-1.3
4,003,873	-		Ga0059261_3892	0.35	-0.5
4,003,873	-		Ga0059261_3892	0.35	-0.2
4,003,873	-		Ga0059261_3892	0.35	+0.6
4,003,899	+		Ga0059261_3892	0.38	+0.7
4,003,899	+		Ga0059261_3892	0.38	-0.1
4,003,899	+		Ga0059261_3892	0.38	+0.5
4,003,899	+		Ga0059261_3892	0.38	-1.1
4,003,997	+		Ga0059261_3892	0.47	+0.3
4,003,997	+		Ga0059261_3892	0.47	-0.3
4,004,082	+		Ga0059261_3892	0.56	+0.5
4,004,082	+				-1.5
4,004,083	-		Ga0059261_3892	0.56	+1.3
4,004,226	+		Ga0059261_3892	0.69	+0.9
4,004,244	+		Ga0059261_3892	0.71	-0.2
4,004,244	+		Ga0059261_3892	0.71	+0.2
4,004,245	-				-1.5
4,004,289	+		Ga0059261_3892	0.76	-0.4
4,004,289	+		Ga0059261_3892	0.76	-1.0
4,004,289	+		Ga0059261_3892	0.76	-0.1
4,004,289	+		Ga0059261_3892	0.76	-0.3
4,004,289	+		Ga0059261_3892	0.76	-0.2
4,004,290	-		Ga0059261_3892	0.76	+0.0
4,004,290	-		Ga0059261_3892	0.76	-0.3
4,004,290	-		Ga0059261_3892	0.76	+0.9
4,004,290	-		Ga0059261_3892	0.76	-0.8
4,004,290	-		Ga0059261_3892	0.76	-1.3
4,004,412	+		Ga0059261_3892	0.88	+0.3
4,004,412	+		Ga0059261_3892	0.88	-0.3
4,004,412	+		Ga0059261_3892	0.88	-0.5
4,004,412	+		Ga0059261_3892	0.88	-4.1
4,004,412	+		Ga0059261_3892	0.88	+0.2
4,004,412	+		Ga0059261_3892	0.88	+0.1
4,004,413	-		Ga0059261_3892	0.88	+0.3
4,004,413	-		Ga0059261_3892	0.88	-1.9
4,004,413	-		Ga0059261_3892	0.88	+0.6
4,004,413	-		Ga0059261_3892	0.88	+0.7
4,004,413	-		Ga0059261_3892	0.88	+1.1
4,004,413	-				+0.6
4,004,514	+				-0.9
4,004,514	+				+0.5
4,004,515	-				+1.5
4,004,515	-				-0.5
4,004,816	+		Ga0059261_3893	0.19	+2.0
4,004,816	+		Ga0059261_3893	0.19	+0.5
4,004,816	+		Ga0059261_3893	0.19	-1.2
4,004,816	+		Ga0059261_3893	0.19	-0.1
4,004,817	-		Ga0059261_3893	0.19	+0.7
4,004,817	-		Ga0059261_3893	0.19	-2.4
4,004,882	+		Ga0059261_3893	0.23	+0.8
4,004,882	+		Ga0059261_3893	0.23	+0.6
4,004,883	-		Ga0059261_3893	0.23	+0.1
4,004,883	-		Ga0059261_3893	0.23	-0.2
4,004,912	+		Ga0059261_3893	0.25	-1.2
4,004,912	+		Ga0059261_3893	0.25	-0.3
4,004,913	-		Ga0059261_3893	0.25	-2.0
4,004,921	+		Ga0059261_3893	0.26	-0.0
4,004,922	-		Ga0059261_3893	0.26	-1.1
4,004,922	-		Ga0059261_3893	0.26	+0.9
4,004,922	-		Ga0059261_3893	0.26	+0.1
4,004,922	-				-1.9
4,004,922	-		Ga0059261_3893	0.26	-0.3
4,004,922	-		Ga0059261_3893	0.26	+0.8
4,004,987	+		Ga0059261_3893	0.30	-0.6
4,004,987	+		Ga0059261_3893	0.30	-0.1
4,004,987	+		Ga0059261_3893	0.30	+2.1
4,004,987	+		Ga0059261_3893	0.30	-0.9
4,004,987	+		Ga0059261_3893	0.30	+0.9
4,004,987	+		Ga0059261_3893	0.30	+0.4
4,004,987	+		Ga0059261_3893	0.30	-0.1
4,004,987	+		Ga0059261_3893	0.30	+0.8
4,004,987	+		Ga0059261_3893	0.30	+0.4
4,004,987	+		Ga0059261_3893	0.30	-0.8
4,004,987	+		Ga0059261_3893	0.30	-0.2
4,004,987	+		Ga0059261_3893	0.30	-5.0
4,004,987	+		Ga0059261_3893	0.30	+0.3
4,004,987	+		Ga0059261_3893	0.30	+0.5
4,004,987	+		Ga0059261_3893	0.30	-1.4
4,004,987	+		Ga0059261_3893	0.30	+0.9
4,004,987	+		Ga0059261_3893	0.30	-2.3
4,004,987	+		Ga0059261_3893	0.30	+0.2
4,004,987	+		Ga0059261_3893	0.30	-0.2
4,004,987	+		Ga0059261_3893	0.30	-0.2
4,004,988	-		Ga0059261_3893	0.30	+0.1
4,004,988	-		Ga0059261_3893	0.30	-0.3
4,004,988	-		Ga0059261_3893	0.30	+1.4
4,004,988	-		Ga0059261_3893	0.30	+0.6
4,004,988	-		Ga0059261_3893	0.30	+0.1
4,004,988	-		Ga0059261_3893	0.30	+0.3
4,004,988	-		Ga0059261_3893	0.30	-0.1
4,004,988	-		Ga0059261_3893	0.30	+0.1
4,004,988	-		Ga0059261_3893	0.30	-0.3
4,004,988	-		Ga0059261_3893	0.30	+0.9
4,004,988	-		Ga0059261_3893	0.30	+0.2
4,004,988	-		Ga0059261_3893	0.30	+0.7
4,004,988	-		Ga0059261_3893	0.30	+0.0
4,004,988	-		Ga0059261_3893	0.30	-1.3
4,004,988	-		Ga0059261_3893	0.30	+0.6
4,004,988	-		Ga0059261_3893	0.30	-0.6
4,004,988	-		Ga0059261_3893	0.30	+0.5
4,004,988	-		Ga0059261_3893	0.30	-0.7
4,004,988	-		Ga0059261_3893	0.30	-0.5
4,004,988	-		Ga0059261_3893	0.30	+0.2
4,004,988	-		Ga0059261_3893	0.30	-1.2
4,004,988	-				+1.0
4,004,988	-		Ga0059261_3893	0.30	-0.5
4,004,988	-		Ga0059261_3893	0.30	+0.7
4,004,993	+		Ga0059261_3893	0.30	+1.5
4,004,993	+		Ga0059261_3893	0.30	+0.4
4,004,993	+		Ga0059261_3893	0.30	-0.3
4,004,993	+		Ga0059261_3893	0.30	-1.4
4,004,994	-		Ga0059261_3893	0.31	+1.3
4,004,994	-		Ga0059261_3893	0.31	-1.0
4,004,994	-		Ga0059261_3893	0.31	+0.5
4,005,012	+		Ga0059261_3893	0.32	-0.2
4,005,013	-		Ga0059261_3893	0.32	-0.7
4,005,013	-		Ga0059261_3893	0.32	-0.0
4,005,013	-		Ga0059261_3893	0.32	-0.0
4,005,014	+		Ga0059261_3893	0.32	+0.9
4,005,014	+		Ga0059261_3893	0.32	-0.8
4,005,015	-		Ga0059261_3893	0.32	-0.4
4,005,015	-		Ga0059261_3893	0.32	-0.6
4,005,023	+		Ga0059261_3893	0.32	-0.1
4,005,023	+		Ga0059261_3893	0.32	+1.0
4,005,024	-		Ga0059261_3893	0.33	+0.0
4,005,024	-		Ga0059261_3893	0.33	+0.2
4,005,156	+		Ga0059261_3893	0.41	+1.2
4,005,156	+		Ga0059261_3893	0.41	-0.6
4,005,156	+		Ga0059261_3893	0.41	+0.4
4,005,156	+		Ga0059261_3893	0.41	-1.4
4,005,156	+		Ga0059261_3893	0.41	-0.2
4,005,156	+		Ga0059261_3893	0.41	+1.1
4,005,156	+		Ga0059261_3893	0.41	-0.3
4,005,156	+		Ga0059261_3893	0.41	+0.5
4,005,156	+		Ga0059261_3893	0.41	-0.1
4,005,156	+		Ga0059261_3893	0.41	-0.5
4,005,156	+		Ga0059261_3893	0.41	-1.8
4,005,156	+		Ga0059261_3893	0.41	-0.5
4,005,156	+		Ga0059261_3893	0.41	-2.4
4,005,157	-		Ga0059261_3893	0.41	-0.3
4,005,157	-		Ga0059261_3893	0.41	-0.9
4,005,157	-		Ga0059261_3893	0.41	+0.9
4,005,157	-		Ga0059261_3893	0.41	-0.9
4,005,157	-		Ga0059261_3893	0.41	+0.1
4,005,157	-		Ga0059261_3893	0.41	+0.2
4,005,157	-		Ga0059261_3893	0.41	+0.4
4,005,157	-		Ga0059261_3893	0.41	+0.3
4,005,294	-		Ga0059261_3893	0.51	+0.9
4,005,294	-		Ga0059261_3893	0.51	-0.9
4,005,294	-		Ga0059261_3893	0.51	+0.1
4,005,294	-		Ga0059261_3893	0.51	+0.3
4,005,294	-		Ga0059261_3893	0.51	-1.5
4,005,295	+		Ga0059261_3893	0.51	+0.2
4,005,296	-		Ga0059261_3893	0.51	+0.6
4,005,296	-		Ga0059261_3893	0.51	+1.1
4,005,296	-		Ga0059261_3893	0.51	-0.5
4,005,372	-		Ga0059261_3893	0.56	-0.2
4,005,372	-		Ga0059261_3893	0.56	+1.4
4,005,372	-		Ga0059261_3893	0.56	+1.3
4,005,383	+		Ga0059261_3893	0.57	+0.2
4,005,384	-		Ga0059261_3893	0.57	-0.8
4,005,455	-		Ga0059261_3893	0.61	+0.2
4,005,455	-		Ga0059261_3893	0.61	-0.9
4,005,455	-		Ga0059261_3893	0.61	+0.6
4,005,491	+		Ga0059261_3893	0.64	-1.0
4,005,613	-		Ga0059261_3893	0.72	+0.4
4,005,692	+		Ga0059261_3893	0.77	+0.9
4,005,692	+		Ga0059261_3893	0.77	-0.5
4,005,692	+		Ga0059261_3893	0.77	-1.2
4,005,693	-		Ga0059261_3893	0.77	+0.1
4,005,693	-				-0.4
4,005,693	-		Ga0059261_3893	0.77	+0.0
4,005,693	-		Ga0059261_3893	0.77	-1.6
4,005,693	-		Ga0059261_3893	0.77	+0.0
4,005,799	+		Ga0059261_3893	0.84	+1.2
4,005,800	-		Ga0059261_3893	0.84	-1.1
4,005,800	-				+0.9
4,005,800	-		Ga0059261_3893	0.84	+0.7
4,005,835	+		Ga0059261_3893	0.87	+0.6
4,005,835	+				+1.0
4,005,835	+		Ga0059261_3893	0.87	-0.6
4,005,835	+		Ga0059261_3893	0.87	+0.6
4,005,836	-		Ga0059261_3893	0.87	-1.0
4,005,836	-		Ga0059261_3893	0.87	+0.4
4,005,836	-		Ga0059261_3893	0.87	+0.2
4,005,836	-		Ga0059261_3893	0.87	-0.2
4,005,836	-		Ga0059261_3893	0.87	-0.8
4,005,985	+				-0.4
4,005,985	+				-1.5
4,005,985	+				-2.3
4,005,985	+				-1.2
4,005,985	+				+0.3
4,005,985	+				-0.5
4,005,985	+				+0.1
4,005,985	+				+0.3
4,005,985	+				+0.6
4,005,986	-				+0.8
4,005,986	-				+0.3
4,005,986	-				-0.1
4,005,986	-				+1.3
4,005,986	-				-3.9
4,005,986	-				-0.1
4,005,986	-				+0.1
4,005,986	-				+0.5
4,005,986	-				-0.8
4,005,986	-				-0.2
4,005,989	+				+1.0
4,005,989	+				+1.1
4,005,989	+				+0.4
4,005,989	+				+0.5
4,005,989	+				+0.3
4,005,989	+				+0.4
4,005,989	+				+1.1
4,005,989	+				+0.0
4,005,989	+				+1.0
4,005,989	+				+0.9
4,005,989	+				-0.6
4,005,989	+				-0.7
4,005,989	+				+2.0
4,005,989	+				+0.1
4,005,989	+				-0.5
4,005,989	+				+0.4
4,005,989	+				+0.3
4,005,990	-				-0.6
4,005,990	-				-0.4
4,005,990	-				-0.9
4,005,990	-				-0.9
4,005,990	-				-0.6
4,005,990	-				+1.4
4,005,990	-				-0.4
4,005,990	-				-1.3
4,005,990	-				+0.8
4,005,990	-				-0.0
4,005,990	-				-0.1
4,005,990	-				+1.0
4,006,001	+				+2.1
4,006,002	-				+0.2
4,006,200	+		Ga0059261_3894	0.14	+0.1
4,006,200	+		Ga0059261_3894	0.14	-1.1
4,006,201	-		Ga0059261_3894	0.14	+0.2
4,006,201	-		Ga0059261_3894	0.14	-0.2
4,006,201	-		Ga0059261_3894	0.14	+0.7
4,006,201	-		Ga0059261_3894	0.14	+0.9
4,006,201	-		Ga0059261_3894	0.14	-0.0
4,006,245	+		Ga0059261_3894	0.19	+0.2
4,006,245	+		Ga0059261_3894	0.19	+0.6
4,006,245	+		Ga0059261_3894	0.19	-1.1
4,006,245	+		Ga0059261_3894	0.19	-3.3
4,006,245	+		Ga0059261_3894	0.19	+0.9
4,006,245	+		Ga0059261_3894	0.19	+0.9
4,006,246	-		Ga0059261_3894	0.19	-0.3
4,006,246	-		Ga0059261_3894	0.19	+0.0
4,006,246	-		Ga0059261_3894	0.19	+0.4
4,006,246	-		Ga0059261_3894	0.19	+0.6
4,006,246	-		Ga0059261_3894	0.19	+0.3
4,006,246	-		Ga0059261_3894	0.19	+0.1
4,006,397	+		Ga0059261_3894	0.33	+0.2
4,006,397	+		Ga0059261_3894	0.33	-0.1
4,006,397	+		Ga0059261_3894	0.33	-0.6
4,006,397	+		Ga0059261_3894	0.33	+0.1
4,006,397	+		Ga0059261_3894	0.33	+0.5
4,006,397	+		Ga0059261_3894	0.33	-0.6
4,006,398	-		Ga0059261_3894	0.33	+0.0
4,006,398	-		Ga0059261_3894	0.33	+1.6
4,006,398	-		Ga0059261_3894	0.33	-1.9
4,006,398	-		Ga0059261_3894	0.33	-0.3
4,006,398	-		Ga0059261_3894	0.33	+0.2
4,006,407	-		Ga0059261_3894	0.34	-0.5
4,006,408	-		Ga0059261_3894	0.34	+1.0
4,006,517	+		Ga0059261_3894	0.45	+0.3
4,006,518	-		Ga0059261_3894	0.45	-0.4
4,006,518	-		Ga0059261_3894	0.45	-1.3
4,006,518	-		Ga0059261_3894	0.45	-2.3
4,006,518	-		Ga0059261_3894	0.45	-0.1
4,006,662	+		Ga0059261_3894	0.58	+0.6
4,006,663	-		Ga0059261_3894	0.59	-0.7
4,006,663	-		Ga0059261_3894	0.59	+0.6
4,006,663	-		Ga0059261_3894	0.59	-2.2
4,006,663	-		Ga0059261_3894	0.59	-0.0