Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3849

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
3,949,680	+		Ga0059261_3848	0.37	+0.6
3,949,680	+		Ga0059261_3848	0.37	-0.3
3,949,681	-		Ga0059261_3848	0.37	-0.7
3,949,812	-		Ga0059261_3848	0.46	-3.5
3,949,812	-		Ga0059261_3848	0.46	+0.6
3,949,889	+		Ga0059261_3848	0.51	+0.8
3,949,889	+		Ga0059261_3848	0.51	-1.5
3,949,890	-		Ga0059261_3848	0.51	-2.7
3,949,890	-		Ga0059261_3848	0.51	-0.4
3,949,890	-		Ga0059261_3848	0.51	+1.7
3,949,891	+		Ga0059261_3848	0.51	-0.7
3,949,891	+		Ga0059261_3848	0.51	-2.7
3,949,892	-		Ga0059261_3848	0.51	-0.1
3,949,892	-		Ga0059261_3848	0.51	-1.1
3,949,892	-		Ga0059261_3848	0.51	-1.0
3,949,892	-		Ga0059261_3848	0.51	-2.4
3,949,967	+		Ga0059261_3848	0.56	+1.6
3,949,967	+		Ga0059261_3848	0.56	-0.4
3,949,968	-		Ga0059261_3848	0.56	-0.6
3,949,968	-		Ga0059261_3848	0.56	-0.0
3,949,968	-		Ga0059261_3848	0.56	+0.1
3,949,979	+		Ga0059261_3848	0.57	+0.1
3,949,979	+		Ga0059261_3848	0.57	+1.1
3,949,980	-		Ga0059261_3848	0.57	+0.1
3,949,980	-		Ga0059261_3848	0.57	+1.7
3,949,980	-		Ga0059261_3848	0.57	-0.4
3,949,980	-		Ga0059261_3848	0.57	+0.5
3,949,980	-		Ga0059261_3848	0.57	+0.2
3,949,980	-		Ga0059261_3848	0.57	-0.2
3,949,980	-		Ga0059261_3848	0.57	-0.5
3,949,981	+		Ga0059261_3848	0.57	+0.2
3,950,258	+		Ga0059261_3848	0.76	-0.8
3,950,291	+		Ga0059261_3848	0.78	+0.6
3,950,291	+		Ga0059261_3848	0.78	-1.1
3,950,291	+		Ga0059261_3848	0.78	+0.4
3,950,291	+		Ga0059261_3848	0.78	+0.4
3,950,291	+		Ga0059261_3848	0.78	-0.3
3,950,292	-		Ga0059261_3848	0.78	-0.9
3,950,292	-		Ga0059261_3848	0.78	-0.3
3,950,330	+		Ga0059261_3848	0.80	+0.3
3,950,330	+		Ga0059261_3848	0.80	+0.5
3,950,331	-		Ga0059261_3848	0.81	+0.4
3,950,481	-				-0.1
3,950,481	-				-0.1
3,950,481	-				-1.3
3,950,525	+				+0.4
3,950,588	+				+0.2
3,950,588	+				+0.9
3,950,588	+				+0.5
3,950,588	+				-0.2
3,950,589	-				-0.3
3,950,589	-				+1.0
3,950,589	-				+0.0
3,950,589	-				+0.5
3,950,589	-				+0.4
3,950,806	+		Ga0059261_3849	0.11	-0.6
3,950,806	+		Ga0059261_3849	0.11	+0.4
3,950,807	-		Ga0059261_3849	0.11	-0.0
3,950,807	-		Ga0059261_3849	0.11	-1.0
3,951,015	+		Ga0059261_3849	0.26	+0.4
3,951,015	+		Ga0059261_3849	0.26	+0.3
3,951,015	+		Ga0059261_3849	0.26	+0.1
3,951,015	+		Ga0059261_3849	0.26	+0.9
3,951,015	+		Ga0059261_3849	0.26	-0.1
3,951,016	-		Ga0059261_3849	0.26	+0.7
3,951,016	-		Ga0059261_3849	0.26	+0.1
3,951,016	-		Ga0059261_3849	0.26	+0.1
3,951,016	-		Ga0059261_3849	0.26	-1.7
3,951,016	-		Ga0059261_3849	0.26	+0.4
3,951,016	-		Ga0059261_3849	0.26	-0.2
3,951,016	-		Ga0059261_3849	0.26	+0.9
3,951,021	+		Ga0059261_3849	0.27	+0.6
3,951,021	+		Ga0059261_3849	0.27	+0.5
3,951,022	-		Ga0059261_3849	0.27	-3.5
3,951,058	+		Ga0059261_3849	0.29	+0.2
3,951,058	+		Ga0059261_3849	0.29	-2.6
3,951,059	-		Ga0059261_3849	0.29	+0.7
3,951,059	-		Ga0059261_3849	0.29	+0.2
3,951,149	-		Ga0059261_3849	0.36	+0.6
3,951,149	-		Ga0059261_3849	0.36	+0.2
3,951,149	-		Ga0059261_3849	0.36	-1.9
3,951,149	-		Ga0059261_3849	0.36	-1.1
3,951,208	+		Ga0059261_3849	0.40	-0.1
3,951,222	+		Ga0059261_3849	0.41	-1.3
3,951,222	+		Ga0059261_3849	0.41	-0.2
3,951,222	+		Ga0059261_3849	0.41	-0.6
3,951,222	+		Ga0059261_3849	0.41	+1.1
3,951,222	+		Ga0059261_3849	0.41	+1.0
3,951,222	+		Ga0059261_3849	0.41	+0.1
3,951,222	+		Ga0059261_3849	0.41	-0.4
3,951,222	+		Ga0059261_3849	0.41	-0.4
3,951,223	-		Ga0059261_3849	0.41	+0.4
3,951,223	-		Ga0059261_3849	0.41	+0.3
3,951,240	+				-0.8
3,951,240	+		Ga0059261_3849	0.42	+0.1
3,951,241	-		Ga0059261_3849	0.42	-0.1
3,951,241	-		Ga0059261_3849	0.42	-1.2
3,951,241	-		Ga0059261_3849	0.42	+0.6
3,951,291	+		Ga0059261_3849	0.46	+0.6
3,951,291	+		Ga0059261_3849	0.46	+0.4
3,951,292	-		Ga0059261_3849	0.46	+0.3
3,951,292	-		Ga0059261_3849	0.46	-0.3
3,951,292	-		Ga0059261_3849	0.46	+0.1
3,951,334	-		Ga0059261_3849	0.49	-0.5
3,951,501	+		Ga0059261_3849	0.61	-0.2
3,951,501	+		Ga0059261_3849	0.61	+0.1
3,951,501	+		Ga0059261_3849	0.61	-0.4
3,951,501	+		Ga0059261_3849	0.61	-3.9
3,951,501	+		Ga0059261_3849	0.61	+0.1
3,951,502	-		Ga0059261_3849	0.61	-2.6
3,951,502	-		Ga0059261_3849	0.61	-0.1
3,951,502	-		Ga0059261_3849	0.61	+0.7
3,951,502	-		Ga0059261_3849	0.61	-0.5
3,951,502	-		Ga0059261_3849	0.61	+0.2
3,951,502	-		Ga0059261_3849	0.61	+1.1
3,951,502	-		Ga0059261_3849	0.61	+0.4
3,951,528	+		Ga0059261_3849	0.62	-0.3
3,951,529	-		Ga0059261_3849	0.62	-1.4
3,951,529	-				+0.2
3,951,671	+		Ga0059261_3849	0.73	-0.2
3,951,671	+		Ga0059261_3849	0.73	-2.5
3,951,729	+		Ga0059261_3849	0.77	-0.0
3,951,729	+		Ga0059261_3849	0.77	-1.1
3,951,729	+		Ga0059261_3849	0.77	-0.7
3,951,729	+		Ga0059261_3849	0.77	+0.2
3,951,729	+		Ga0059261_3849	0.77	+0.4
3,951,730	-		Ga0059261_3849	0.77	+1.0
3,951,730	-		Ga0059261_3849	0.77	+0.9
3,951,816	+		Ga0059261_3849	0.83	+0.5
3,951,816	+		Ga0059261_3849	0.83	+0.5
3,951,816	+		Ga0059261_3849	0.83	-0.1
3,951,816	+		Ga0059261_3849	0.83	+0.8
3,951,816	+		Ga0059261_3849	0.83	+1.5
3,951,817	-		Ga0059261_3849	0.83	-1.2
3,951,817	-		Ga0059261_3849	0.83	+0.4
3,951,817	-		Ga0059261_3849	0.83	+0.2
3,951,819	+		Ga0059261_3849	0.83	+0.8
3,951,819	+		Ga0059261_3849	0.83	+0.1
3,951,819	+		Ga0059261_3849	0.83	-1.5
3,951,820	-		Ga0059261_3849	0.83	+0.9
3,951,820	-		Ga0059261_3849	0.83	+0.4
3,952,005	+				+0.5
3,952,006	-				-0.2
3,952,006	-				-1.6
3,952,007	+				+0.4
3,952,007	+				+0.2
3,952,007	+				+0.7
3,952,007	+				-0.2
3,952,008	-				-0.3
3,952,008	-				-0.3
3,952,187	-		Ga0059261_3850	0.12	+0.0
3,952,192	+		Ga0059261_3850	0.12	-0.4
3,952,192	+		Ga0059261_3850	0.12	+0.4
3,952,193	-		Ga0059261_3850	0.12	+1.1
3,952,193	-		Ga0059261_3850	0.12	-0.1
3,952,193	-		Ga0059261_3850	0.12	-0.1
3,952,193	-		Ga0059261_3850	0.12	+0.7
3,952,193	-		Ga0059261_3850	0.12	+0.2
3,952,193	-		Ga0059261_3850	0.12	+0.4
3,952,193	-		Ga0059261_3850	0.12	-3.7
3,952,193	-		Ga0059261_3850	0.12	+0.3
3,952,193	-		Ga0059261_3850	0.12	-0.1
3,952,193	-		Ga0059261_3850	0.12	+1.7
3,952,193	-		Ga0059261_3850	0.12	-0.2
3,952,193	-		Ga0059261_3850	0.12	+0.2
3,952,297	-		Ga0059261_3850	0.20	+0.3
3,952,297	-		Ga0059261_3850	0.20	-0.4
3,952,297	-		Ga0059261_3850	0.20	-1.6
3,952,297	-		Ga0059261_3850	0.20	-1.0
3,952,362	+		Ga0059261_3850	0.25	+0.9
3,952,362	+		Ga0059261_3850	0.25	+1.0
3,952,362	+		Ga0059261_3850	0.25	-0.3
3,952,363	-		Ga0059261_3850	0.25	-2.2
3,952,363	-		Ga0059261_3850	0.25	+0.9
3,952,363	-		Ga0059261_3850	0.25	+0.9
3,952,363	-		Ga0059261_3850	0.25	-0.2
3,952,363	-		Ga0059261_3850	0.25	-0.2
3,952,754	+		Ga0059261_3850	0.56	-0.1
3,952,754	+		Ga0059261_3850	0.56	+0.6
3,952,754	+		Ga0059261_3850	0.56	-0.5
3,952,754	+		Ga0059261_3850	0.56	-0.6
3,952,755	-		Ga0059261_3850	0.56	+0.0
3,952,755	-		Ga0059261_3850	0.56	+0.6
3,952,755	-		Ga0059261_3850	0.56	-0.4
3,952,771	-		Ga0059261_3850	0.57	-0.3
3,952,771	-		Ga0059261_3850	0.57	+0.2
3,952,771	-		Ga0059261_3850	0.57	-0.7
3,952,847	+		Ga0059261_3850	0.63	-1.5
3,952,847	+		Ga0059261_3850	0.63	+0.3
3,952,847	+		Ga0059261_3850	0.63	+0.4
3,952,847	+		Ga0059261_3850	0.63	+0.2
3,952,847	+		Ga0059261_3850	0.63	+0.8
3,952,848	-		Ga0059261_3850	0.64	-0.2
3,952,848	-		Ga0059261_3850	0.64	-1.2
3,952,848	-		Ga0059261_3850	0.64	-2.9
3,952,848	-		Ga0059261_3850	0.64	+0.1
3,952,848	-		Ga0059261_3850	0.64	+1.7
3,952,848	-		Ga0059261_3850	0.64	-1.3
3,952,848	-		Ga0059261_3850	0.64	+0.8
3,952,848	-		Ga0059261_3850	0.64	-0.2
3,952,848	-		Ga0059261_3850	0.64	+0.5
3,952,848	-		Ga0059261_3850	0.64	-0.6
3,952,862	+		Ga0059261_3850	0.65	-0.2
3,952,862	+		Ga0059261_3850	0.65	+0.3
3,952,863	-		Ga0059261_3850	0.65	+0.4