Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3147

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
3,288,122	+		Ga0059261_3146	0.18	+0.1
3,288,122	+		Ga0059261_3146	0.18	+0.4
3,288,123	-		Ga0059261_3146	0.18	+0.3
3,288,302	+		Ga0059261_3146	0.33	+1.1
3,288,302	+		Ga0059261_3146	0.33	+1.2
3,288,302	+		Ga0059261_3146	0.33	+0.1
3,288,302	+		Ga0059261_3146	0.33	-1.4
3,288,302	+		Ga0059261_3146	0.33	-0.3
3,288,303	-		Ga0059261_3146	0.33	-0.4
3,288,303	-		Ga0059261_3146	0.33	+0.5
3,288,303	-		Ga0059261_3146	0.33	+0.1
3,288,303	-		Ga0059261_3146	0.33	-1.3
3,288,303	-		Ga0059261_3146	0.33	-1.1
3,288,303	-		Ga0059261_3146	0.33	+0.0
3,288,303	-		Ga0059261_3146	0.33	+2.1
3,288,368	+		Ga0059261_3146	0.38	+0.4
3,288,369	-		Ga0059261_3146	0.39	-0.4
3,288,369	-		Ga0059261_3146	0.39	+0.9
3,288,380	+		Ga0059261_3146	0.39	-1.9
3,288,380	+		Ga0059261_3146	0.39	+1.2
3,288,380	+		Ga0059261_3146	0.39	-1.8
3,288,380	+		Ga0059261_3146	0.39	+0.8
3,288,380	+		Ga0059261_3146	0.39	+0.5
3,288,380	+		Ga0059261_3146	0.39	+0.9
3,288,380	+		Ga0059261_3146	0.39	-0.3
3,288,380	+		Ga0059261_3146	0.39	+0.8
3,288,380	+		Ga0059261_3146	0.39	+1.8
3,288,380	+		Ga0059261_3146	0.39	-0.5
3,288,380	+		Ga0059261_3146	0.39	+0.6
3,288,381	-		Ga0059261_3146	0.40	-0.4
3,288,381	-		Ga0059261_3146	0.40	+0.5
3,288,381	-		Ga0059261_3146	0.40	-0.2
3,288,381	-		Ga0059261_3146	0.40	+0.5
3,288,381	-		Ga0059261_3146	0.40	+0.1
3,288,381	-		Ga0059261_3146	0.40	+0.8
3,288,381	-		Ga0059261_3146	0.40	+0.8
3,288,381	-		Ga0059261_3146	0.40	+1.3
3,288,381	-		Ga0059261_3146	0.40	+0.5
3,288,381	-		Ga0059261_3146	0.40	-0.1
3,288,498	+		Ga0059261_3146	0.49	-2.2
3,288,581	+		Ga0059261_3146	0.56	-0.1
3,288,581	+		Ga0059261_3146	0.56	-0.2
3,288,581	+		Ga0059261_3146	0.56	-2.6
3,288,581	+		Ga0059261_3146	0.56	+0.3
3,288,581	+		Ga0059261_3146	0.56	+0.2
3,288,582	-		Ga0059261_3146	0.56	+0.7
3,288,582	-		Ga0059261_3146	0.56	+1.1
3,288,582	-		Ga0059261_3146	0.56	+1.3
3,288,582	-		Ga0059261_3146	0.56	-3.1
3,288,582	-		Ga0059261_3146	0.56	-0.3
3,288,589	+		Ga0059261_3146	0.57	-0.7
3,288,589	+		Ga0059261_3146	0.57	-2.9
3,288,589	+		Ga0059261_3146	0.57	+0.8
3,288,589	+		Ga0059261_3146	0.57	-0.6
3,288,589	+		Ga0059261_3146	0.57	-0.0
3,288,589	+		Ga0059261_3146	0.57	-0.0
3,288,589	+		Ga0059261_3146	0.57	+1.6
3,288,589	+		Ga0059261_3146	0.57	-0.2
3,288,589	+		Ga0059261_3146	0.57	+1.0
3,288,590	-		Ga0059261_3146	0.57	-0.9
3,288,590	-		Ga0059261_3146	0.57	-2.0
3,288,590	-		Ga0059261_3146	0.57	-0.2
3,288,590	-		Ga0059261_3146	0.57	+1.8
3,288,590	-		Ga0059261_3146	0.57	-2.4
3,288,590	-		Ga0059261_3146	0.57	+1.9
3,288,590	-		Ga0059261_3146	0.57	-0.3
3,288,590	-		Ga0059261_3146	0.57	-0.0
3,288,881	+		Ga0059261_3146	0.81	-0.6
3,288,881	+		Ga0059261_3146	0.81	-1.4
3,288,881	+		Ga0059261_3146	0.81	-0.0
3,288,881	+		Ga0059261_3146	0.81	+1.8
3,288,881	+		Ga0059261_3146	0.81	-0.4
3,288,881	+		Ga0059261_3146	0.81	-0.2
3,288,881	+		Ga0059261_3146	0.81	+0.1
3,288,881	+		Ga0059261_3146	0.81	+1.6
3,288,881	+		Ga0059261_3146	0.81	-0.6
3,288,882	-		Ga0059261_3146	0.81	-1.8
3,288,882	-		Ga0059261_3146	0.81	+1.3
3,288,882	-		Ga0059261_3146	0.81	-0.8
3,288,882	-		Ga0059261_3146	0.81	-0.9
3,288,882	-		Ga0059261_3146	0.81	+1.6
3,288,882	-		Ga0059261_3146	0.81	-0.7
3,288,920	+		Ga0059261_3146	0.84	+0.5
3,288,920	+		Ga0059261_3146	0.84	+1.2
3,288,921	-		Ga0059261_3146	0.84	+0.9
3,288,932	+		Ga0059261_3146	0.85	-1.6
3,289,001	+				+0.0
3,289,001	+				-0.7
3,289,001	+				-0.0
3,289,002	-				+1.3
3,289,109	+				-0.4
3,289,109	+				+1.0
3,289,110	-				+0.0
3,289,181	-		Ga0059261_3147	0.15	+1.6
3,289,278	+		Ga0059261_3147	0.26	-0.8
3,289,278	+		Ga0059261_3147	0.26	-1.8
3,289,278	+		Ga0059261_3147	0.26	+0.5
3,289,278	+		Ga0059261_3147	0.26	-2.5
3,289,278	+		Ga0059261_3147	0.26	+0.3
3,289,278	+		Ga0059261_3147	0.26	-2.2
3,289,278	+		Ga0059261_3147	0.26	+0.4
3,289,279	-		Ga0059261_3147	0.26	-0.8
3,289,279	-		Ga0059261_3147	0.26	+0.4
3,289,279	-		Ga0059261_3147	0.26	-0.5
3,289,279	-		Ga0059261_3147	0.26	-0.6
3,289,279	-		Ga0059261_3147	0.26	+0.5
3,289,279	-		Ga0059261_3147	0.26	-0.4
3,289,279	-		Ga0059261_3147	0.26	-0.8
3,289,279	-		Ga0059261_3147	0.26	-0.0
3,289,279	-		Ga0059261_3147	0.26	+0.9
3,289,279	-		Ga0059261_3147	0.26	+0.2
3,289,279	-		Ga0059261_3147	0.26	+0.4
3,289,443	+		Ga0059261_3147	0.46	+0.6
3,289,443	+		Ga0059261_3147	0.46	+0.3
3,289,443	+		Ga0059261_3147	0.46	+0.6
3,289,443	+		Ga0059261_3147	0.46	+0.1
3,289,444	-		Ga0059261_3147	0.46	+1.8
3,289,444	-		Ga0059261_3147	0.46	+0.3
3,289,444	-		Ga0059261_3147	0.46	+1.0
3,289,444	-		Ga0059261_3147	0.46	+0.0
3,289,444	-		Ga0059261_3147	0.46	+1.3
3,289,444	-		Ga0059261_3147	0.46	+0.3
3,289,444	-		Ga0059261_3147	0.46	-1.8
3,289,464	+		Ga0059261_3147	0.48	-0.2
3,289,465	-		Ga0059261_3147	0.48	+1.3
3,289,465	-		Ga0059261_3147	0.48	+0.2
3,289,465	-		Ga0059261_3147	0.48	-0.3
3,289,470	+		Ga0059261_3147	0.49	-1.9
3,289,471	-		Ga0059261_3147	0.49	-0.5
3,289,506	+		Ga0059261_3147	0.53	+0.1
3,289,506	+		Ga0059261_3147	0.53	-0.2
3,289,506	+		Ga0059261_3147	0.53	-0.3
3,289,527	+		Ga0059261_3147	0.55	+1.5
3,289,527	+		Ga0059261_3147	0.55	+0.7
3,289,527	+		Ga0059261_3147	0.55	-1.7
3,289,528	-		Ga0059261_3147	0.56	+1.4
3,289,561	+		Ga0059261_3147	0.59	-0.8
3,289,561	+		Ga0059261_3147	0.59	-0.4
3,289,589	+		Ga0059261_3147	0.63	-0.2
3,289,589	+		Ga0059261_3147	0.63	+0.2
3,289,589	+		Ga0059261_3147	0.63	+0.4
3,289,589	+		Ga0059261_3147	0.63	-0.7
3,289,770	+		Ga0059261_3147	0.84	-0.2
3,289,770	+		Ga0059261_3147	0.84	+0.6
3,289,771	-		Ga0059261_3147	0.84	-0.9
3,289,771	-		Ga0059261_3147	0.84	-0.7
3,289,771	-		Ga0059261_3147	0.84	+0.8
3,289,980	+				+0.3
3,289,980	+				+0.9
3,290,008	+				-2.0
3,290,009	-				-3.3
3,290,009	-				-3.7
3,290,009	-				-4.3
3,290,009	-				-2.7
3,290,056	+				-2.4
3,290,056	+				-1.8
3,290,056	+				-3.5
3,290,056	+				-1.1
3,290,056	+				-1.1
3,290,057	-				-3.6
3,290,057	-				-3.7
3,290,057	-				-2.8
3,290,057	-				-3.4
3,290,057	-				-4.0
3,290,057	-				+0.0
3,290,057	-				-2.6
3,290,057	-				-2.4
3,290,057	-				-3.5
3,290,057	-				-4.5
3,290,057	-				-2.6
3,290,089	+				-3.4
3,290,089	+				-3.5
3,290,090	-				-3.1
3,290,090	-				-3.6
3,290,185	+		Ga0059261_3148	0.16	-2.9
3,290,185	+		Ga0059261_3148	0.16	-1.5
3,290,186	-		Ga0059261_3148	0.16	-2.0
3,290,186	-		Ga0059261_3148	0.16	-2.4
3,290,332	+		Ga0059261_3148	0.29	-4.2
3,290,332	+		Ga0059261_3148	0.29	-2.2
3,290,333	-		Ga0059261_3148	0.29	-2.8
3,290,333	-		Ga0059261_3148	0.29	-1.0
3,290,333	-		Ga0059261_3148	0.29	-4.3
3,290,333	-		Ga0059261_3148	0.29	-4.1
3,290,344	+		Ga0059261_3148	0.30	-3.8
3,290,344	+		Ga0059261_3148	0.30	-3.9
3,290,344	+		Ga0059261_3148	0.30	-3.1
3,290,344	+		Ga0059261_3148	0.30	-2.1
3,290,344	+		Ga0059261_3148	0.30	-3.4
3,290,345	-		Ga0059261_3148	0.30	-2.1
3,290,345	-		Ga0059261_3148	0.30	-2.6
3,290,345	-		Ga0059261_3148	0.30	-0.9
3,290,368	+		Ga0059261_3148	0.32	-2.9
3,290,369	-		Ga0059261_3148	0.32	-1.8
3,290,369	-		Ga0059261_3148	0.32	-2.2
3,290,369	-		Ga0059261_3148	0.32	-3.4
3,290,369	-		Ga0059261_3148	0.32	-3.5
3,290,369	-		Ga0059261_3148	0.32	-1.9
3,290,374	+		Ga0059261_3148	0.33	-0.2
3,290,374	+		Ga0059261_3148	0.33	-1.8
3,290,434	+		Ga0059261_3148	0.38	-2.5
3,290,434	+		Ga0059261_3148	0.38	-3.4
3,290,434	+		Ga0059261_3148	0.38	-3.7
3,290,435	-		Ga0059261_3148	0.38	-3.7
3,290,435	-		Ga0059261_3148	0.38	-2.9
3,290,446	+		Ga0059261_3148	0.39	-2.9
3,290,446	+		Ga0059261_3148	0.39	-2.8
3,290,446	+		Ga0059261_3148	0.39	-4.4
3,290,447	-		Ga0059261_3148	0.39	-5.0
3,290,447	-				-0.2
3,290,447	-		Ga0059261_3148	0.39	-1.8
3,290,554	+		Ga0059261_3148	0.48	-2.2
3,290,555	-		Ga0059261_3148	0.48	-0.6
3,290,555	-		Ga0059261_3148	0.48	-4.4
3,290,638	+		Ga0059261_3148	0.55	-2.8
3,290,743	+		Ga0059261_3148	0.65	-1.5
3,290,743	+		Ga0059261_3148	0.65	-1.5
3,290,743	+		Ga0059261_3148	0.65	-1.9
3,290,743	+		Ga0059261_3148	0.65	-2.7
3,290,743	+		Ga0059261_3148	0.65	-2.6
3,290,744	-		Ga0059261_3148	0.65	-3.4
3,290,773	+		Ga0059261_3148	0.67	-1.5
3,290,773	+				-1.0
3,290,773	+		Ga0059261_3148	0.67	-2.7
3,290,773	+		Ga0059261_3148	0.67	-2.0
3,290,773	+		Ga0059261_3148	0.67	-3.2
3,290,773	+		Ga0059261_3148	0.67	-4.2
3,290,774	-		Ga0059261_3148	0.67	-5.7
3,290,774	-		Ga0059261_3148	0.67	-3.3
3,290,824	+		Ga0059261_3148	0.72	-1.8
3,290,824	+		Ga0059261_3148	0.72	-2.8
3,290,824	+		Ga0059261_3148	0.72	-2.8
3,290,824	+		Ga0059261_3148	0.72	-3.6
3,290,824	+		Ga0059261_3148	0.72	-0.2
3,290,825	-		Ga0059261_3148	0.72	-2.3
3,290,825	-		Ga0059261_3148	0.72	-4.0
3,290,825	-		Ga0059261_3148	0.72	-2.2
3,290,825	-		Ga0059261_3148	0.72	-2.8
3,290,825	-		Ga0059261_3148	0.72	-2.4
3,290,825	-		Ga0059261_3148	0.72	-2.9
3,290,825	-		Ga0059261_3148	0.72	-1.7
3,290,826	+		Ga0059261_3148	0.72	-2.2
3,290,827	-		Ga0059261_3148	0.72	-2.1
3,290,876	-		Ga0059261_3148	0.76	-4.2