Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1931

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
2,039,012	+		Ga0059261_1930	0.42	-2.0
2,039,012	+		Ga0059261_1930	0.42	-0.4
2,039,013	-		Ga0059261_1930	0.42	+0.2
2,039,013	-		Ga0059261_1930	0.42	+0.4
2,039,013	-		Ga0059261_1930	0.42	-0.6
2,039,013	-		Ga0059261_1930	0.42	+0.5
2,039,177	+		Ga0059261_1930	0.52	-0.2
2,039,178	-		Ga0059261_1930	0.52	-1.4
2,039,178	-				+0.4
2,039,178	-		Ga0059261_1930	0.52	+0.2
2,039,178	-		Ga0059261_1930	0.52	-0.9
2,039,178	-		Ga0059261_1930	0.52	+0.4
2,039,203	+		Ga0059261_1930	0.54	+1.4
2,039,203	+				+2.0
2,039,204	-		Ga0059261_1930	0.54	+0.4
2,039,242	+		Ga0059261_1930	0.56	+1.0
2,039,252	+		Ga0059261_1930	0.57	-0.7
2,039,252	+		Ga0059261_1930	0.57	-0.8
2,039,252	+		Ga0059261_1930	0.57	+0.3
2,039,253	-				+2.2
2,039,300	+		Ga0059261_1930	0.59	+0.3
2,039,472	-		Ga0059261_1930	0.70	+1.5
2,039,472	-		Ga0059261_1930	0.70	-3.6
2,039,472	-		Ga0059261_1930	0.70	-0.5
2,039,537	+		Ga0059261_1930	0.74	-0.6
2,039,538	-		Ga0059261_1930	0.74	-0.8
2,039,538	-		Ga0059261_1930	0.74	-2.0
2,039,538	-		Ga0059261_1930	0.74	-3.3
2,039,538	-		Ga0059261_1930	0.74	-0.2
2,039,538	-		Ga0059261_1930	0.74	+1.1
2,039,615	+		Ga0059261_1930	0.78	-1.1
2,039,615	+		Ga0059261_1930	0.78	-1.4
2,039,615	+		Ga0059261_1930	0.78	-0.0
2,039,615	+		Ga0059261_1930	0.78	+2.2
2,039,616	-		Ga0059261_1930	0.78	+1.0
2,039,616	-		Ga0059261_1930	0.78	+0.6
2,039,616	-		Ga0059261_1930	0.78	-1.4
2,039,616	-		Ga0059261_1930	0.78	-1.7
2,040,171	+		Ga0059261_1931	0.27	+1.7
2,040,171	+		Ga0059261_1931	0.27	-1.6
2,040,171	+				-2.1
2,040,171	+		Ga0059261_1931	0.27	+0.4
2,040,171	+		Ga0059261_1931	0.27	+1.0
2,040,171	+		Ga0059261_1931	0.27	+0.1
2,040,172	-		Ga0059261_1931	0.28	-2.6
2,040,172	-		Ga0059261_1931	0.28	-0.6
2,040,172	-		Ga0059261_1931	0.28	-0.4
2,040,172	-		Ga0059261_1931	0.28	+0.2
2,040,172	-		Ga0059261_1931	0.28	+0.6
2,040,172	-		Ga0059261_1931	0.28	-2.4
2,040,172	-		Ga0059261_1931	0.28	+0.3
2,040,172	-		Ga0059261_1931	0.28	-1.0
2,040,172	-		Ga0059261_1931	0.28	-2.4
2,040,186	+		Ga0059261_1931	0.30	+1.4
2,040,186	+		Ga0059261_1931	0.30	+1.1
2,040,186	+		Ga0059261_1931	0.30	-1.3
2,040,186	+		Ga0059261_1931	0.30	-3.7
2,040,186	+		Ga0059261_1931	0.30	-1.9
2,040,186	+		Ga0059261_1931	0.30	+0.1
2,040,186	+		Ga0059261_1931	0.30	+0.6
2,040,186	+		Ga0059261_1931	0.30	+1.1
2,040,187	-		Ga0059261_1931	0.30	-0.8
2,040,187	-		Ga0059261_1931	0.30	+0.4
2,040,187	-		Ga0059261_1931	0.30	+0.9
2,040,187	-		Ga0059261_1931	0.30	+0.2
2,040,187	-		Ga0059261_1931	0.30	-0.4
2,040,187	-		Ga0059261_1931	0.30	+0.3
2,040,187	-		Ga0059261_1931	0.30	-1.4
2,040,256	-		Ga0059261_1931	0.40	+0.0
2,040,285	+		Ga0059261_1931	0.44	-0.3
2,040,285	+		Ga0059261_1931	0.44	-0.1
2,040,285	+		Ga0059261_1931	0.44	-0.2
2,040,286	-		Ga0059261_1931	0.44	-0.2
2,040,286	-		Ga0059261_1931	0.44	-0.1
2,040,656	+				+0.3
2,040,656	+				+0.4
2,040,657	-				-1.4
2,040,657	-				-0.3
2,040,657	-				-2.0
2,040,657	-				+0.9
2,040,657	-				+0.3
2,040,657	-				+1.0
2,040,660	-				-3.3
2,040,839	-		Ga0059261_1932	0.11	-0.1
2,040,847	+		Ga0059261_1932	0.12	-2.7
2,040,847	+		Ga0059261_1932	0.12	-3.5
2,040,847	+		Ga0059261_1932	0.12	-3.8
2,040,847	+		Ga0059261_1932	0.12	+0.0
2,040,848	-				-1.6
2,040,848	-		Ga0059261_1932	0.12	-1.2
2,040,848	-		Ga0059261_1932	0.12	-3.6
2,040,889	+		Ga0059261_1932	0.15	-5.1
2,040,889	+		Ga0059261_1932	0.15	-3.3
2,040,889	+		Ga0059261_1932	0.15	-2.6
2,040,890	-		Ga0059261_1932	0.15	-1.3
2,040,890	-		Ga0059261_1932	0.15	-3.8
2,040,890	-		Ga0059261_1932	0.15	-2.7
2,040,947	+		Ga0059261_1932	0.18	-2.2
2,040,947	+		Ga0059261_1932	0.18	-3.6
2,040,947	+		Ga0059261_1932	0.18	-0.8
2,040,947	+		Ga0059261_1932	0.18	-1.5
2,040,947	+		Ga0059261_1932	0.18	-3.1
2,040,948	-		Ga0059261_1932	0.18	-2.9
2,040,948	-		Ga0059261_1932	0.18	-2.5
2,040,948	-		Ga0059261_1932	0.18	-1.5
2,040,948	-		Ga0059261_1932	0.18	-1.5
2,040,948	-		Ga0059261_1932	0.18	-5.3
2,040,948	-		Ga0059261_1932	0.18	-1.9
2,040,948	-		Ga0059261_1932	0.18	-1.0
2,040,948	-		Ga0059261_1932	0.18	-5.0
2,040,948	-		Ga0059261_1932	0.18	-2.2
2,040,948	-		Ga0059261_1932	0.18	-0.5
2,040,955	+		Ga0059261_1932	0.19	-2.7
2,041,003	+		Ga0059261_1932	0.22	-3.7
2,041,004	-		Ga0059261_1932	0.22	-1.8
2,041,066	+		Ga0059261_1932	0.26	-0.0
2,041,067	-		Ga0059261_1932	0.26	-1.7
2,041,207	+		Ga0059261_1932	0.36	-1.5
2,041,207	+		Ga0059261_1932	0.36	-1.4
2,041,207	+		Ga0059261_1932	0.36	-1.5
2,041,208	-		Ga0059261_1932	0.36	-2.4
2,041,208	-		Ga0059261_1932	0.36	-0.5
2,041,208	-		Ga0059261_1932	0.36	-0.4
2,041,208	-		Ga0059261_1932	0.36	-3.4
2,041,208	-		Ga0059261_1932	0.36	-2.0
2,041,279	+		Ga0059261_1932	0.40	-3.5
2,041,279	+		Ga0059261_1932	0.40	-0.2
2,041,279	+		Ga0059261_1932	0.40	+0.9
2,041,279	+		Ga0059261_1932	0.40	-2.3
2,041,280	-		Ga0059261_1932	0.40	-0.8
2,041,280	-		Ga0059261_1932	0.40	-2.7
2,041,280	-		Ga0059261_1932	0.40	-2.3
2,041,397	+		Ga0059261_1932	0.48	+1.6
2,041,399	+		Ga0059261_1932	0.48	-4.8
2,041,399	+		Ga0059261_1932	0.48	-1.0
2,041,399	+		Ga0059261_1932	0.48	-5.0
2,041,399	+		Ga0059261_1932	0.48	-1.9
2,041,399	+		Ga0059261_1932	0.48	-1.0
2,041,399	+		Ga0059261_1932	0.48	-1.5
2,041,399	+		Ga0059261_1932	0.48	-3.3
2,041,399	+		Ga0059261_1932	0.48	-3.4
2,041,399	+		Ga0059261_1932	0.48	-5.0
2,041,399	+		Ga0059261_1932	0.48	-1.7
2,041,400	-		Ga0059261_1932	0.48	-0.4
2,041,400	-		Ga0059261_1932	0.48	-0.9
2,041,400	-		Ga0059261_1932	0.48	-3.4
2,041,400	-		Ga0059261_1932	0.48	-2.9
2,041,400	-		Ga0059261_1932	0.48	-2.3
2,041,400	-		Ga0059261_1932	0.48	-1.7
2,041,400	-		Ga0059261_1932	0.48	-2.2
2,041,447	+		Ga0059261_1932	0.51	+0.8
2,041,447	+		Ga0059261_1932	0.51	-2.9
2,041,487	+		Ga0059261_1932	0.54	-2.3
2,041,487	+		Ga0059261_1932	0.54	-1.8
2,041,629	-		Ga0059261_1932	0.63	-0.9
2,041,629	-		Ga0059261_1932	0.63	-1.5