Experiment: D-Cellobiose (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0057 and Ga0059261_0058 are separated by 41 nucleotides Ga0059261_0058 and Ga0059261_0059 are separated by 15 nucleotides Ga0059261_0059 and Ga0059261_0060 are separated by 2 nucleotides Ga0059261_0060 and Ga0059261_0061 are separated by 147 nucleotides
Ga0059261_0057: Ga0059261_0057 - Glycosyltransferase, at 51,062 to 52,420
_0057
Ga0059261_0058: Ga0059261_0058 - monothiol glutaredoxin, Grx4 family, at 52,462 to 52,791
_0058
Ga0059261_0059: Ga0059261_0059 - Stress-induced morphogen (activity unknown), at 52,807 to 53,049
_0059
Ga0059261_0060: Ga0059261_0060 - Uncharacterized conserved protein, at 53,052 to 53,375
_0060
Ga0059261_0061: Ga0059261_0061 - nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19), at 53,523 to 54,368
_0061
Position (kb) 53
54 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 52.107 kb on + strand, within Ga0059261_0057 at 52.107 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.281 kb on + strand, within Ga0059261_0057 at 52.281 kb on + strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.302 kb on + strand at 52.302 kb on + strand at 52.302 kb on + strand at 52.302 kb on + strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.335 kb on + strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.428 kb on + strand at 52.428 kb on + strand at 52.429 kb on - strand at 52.429 kb on - strand at 52.429 kb on - strand at 52.436 kb on - strand at 52.436 kb on - strand at 52.887 kb on - strand, within Ga0059261_0059 at 52.887 kb on - strand, within Ga0059261_0059 at 52.887 kb on - strand, within Ga0059261_0059 at 52.953 kb on - strand, within Ga0059261_0059 at 53.053 kb on + strand at 53.054 kb on - strand at 53.054 kb on - strand at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.410 kb on + strand at 53.410 kb on + strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.489 kb on + strand at 53.491 kb on + strand at 53.491 kb on + strand at 53.491 kb on + strand at 54.373 kb on + strand at 54.373 kb on + strand at 54.373 kb on + strand at 54.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C); no added vitamins remove 52,107 + Ga0059261_0057 0.77 +4.0 52,107 + Ga0059261_0057 0.77 +4.0 52,201 + Ga0059261_0057 0.84 +4.3 52,201 + Ga0059261_0057 0.84 +4.2 52,201 + Ga0059261_0057 0.84 +4.7 52,201 + Ga0059261_0057 0.84 +4.0 52,201 + Ga0059261_0057 0.84 +4.0 52,201 + Ga0059261_0057 0.84 +4.4 52,201 + Ga0059261_0057 0.84 +5.1 52,201 + Ga0059261_0057 0.84 +4.3 52,201 + Ga0059261_0057 0.84 +4.5 52,202 - Ga0059261_0057 0.84 +2.7 52,202 - Ga0059261_0057 0.84 +4.8 52,202 - Ga0059261_0057 0.84 +4.2 52,202 - Ga0059261_0057 0.84 +3.5 52,281 + Ga0059261_0057 0.90 +4.6 52,281 + Ga0059261_0057 0.90 +4.1 52,282 - Ga0059261_0057 0.90 +4.3 52,282 - Ga0059261_0057 0.90 +4.5 52,282 - Ga0059261_0057 0.90 +4.2 52,282 - Ga0059261_0057 0.90 +4.5 52,282 - Ga0059261_0057 0.90 +4.5 52,282 - Ga0059261_0057 0.90 +4.1 52,282 - Ga0059261_0057 0.90 +4.2 52,282 - Ga0059261_0057 0.90 +4.5 52,302 + +4.1 52,302 + +4.6 52,302 + +3.6 52,302 + +4.2 52,303 - +3.7 52,303 - +4.6 52,303 - +4.6 52,303 - +4.6 52,335 + +4.2 52,336 - +4.3 52,336 - +4.5 52,336 - +4.5 52,336 - +4.6 52,423 + +4.5 52,423 + +4.4 52,423 + +4.1 52,423 + +4.1 52,423 + +5.1 52,423 + +4.1 52,424 - +4.3 52,424 - +4.0 52,424 - +3.9 52,424 - +2.6 52,424 - +3.9 52,428 + +5.1 52,428 + +4.4 52,429 - +4.5 52,429 - +5.0 52,429 - +5.0 52,436 - +0.9 52,436 - +1.6 52,887 - Ga0059261_0059 0.33 +0.0 52,887 - Ga0059261_0059 0.33 -1.0 52,887 - Ga0059261_0059 0.33 +0.0 52,953 - Ga0059261_0059 0.60 +1.0 53,053 + -3.4 53,054 - +0.8 53,054 - +1.1 53,225 - Ga0059261_0060 0.53 +1.3 53,225 - Ga0059261_0060 0.53 +1.0 53,225 - Ga0059261_0060 0.53 +1.4 53,225 - Ga0059261_0060 0.53 +1.5 53,225 - Ga0059261_0060 0.53 +1.0 53,410 + +1.2 53,410 + +1.0 53,411 - +1.4 53,411 - +0.5 53,411 - +0.6 53,411 - +0.6 53,411 - +0.8 53,489 + +1.3 53,491 + +1.0 53,491 + +1.3 53,491 + +2.0 54,373 + +0.8 54,373 + -0.7 54,373 + -1.9 54,374 - -0.0
Or see this region's nucleotide sequence