Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18635 and BWI76_RS18640 are separated by 797 nucleotides BWI76_RS18640 and BWI76_RS18645 are separated by 39 nucleotides BWI76_RS18645 and BWI76_RS18650 are separated by 71 nucleotides
BWI76_RS18635: BWI76_RS18635 - tRNA-Asn, at 3,864,132 to 3,864,207
_RS18635
BWI76_RS18640: BWI76_RS18640 - helix-turn-helix transcriptional regulator, at 3,865,005 to 3,865,505
_RS18640
BWI76_RS18645: BWI76_RS18645 - type-1 fimbrial protein subunit A, at 3,865,545 to 3,866,090
_RS18645
BWI76_RS18650: BWI76_RS18650 - fimbrial protein, at 3,866,162 to 3,866,698
_RS18650
Position (kb)
3865
3866 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3864.285 kb on + strand at 3864.312 kb on + strand at 3864.318 kb on + strand at 3864.388 kb on - strand at 3864.391 kb on + strand at 3864.412 kb on - strand at 3864.508 kb on + strand at 3864.609 kb on + strand at 3864.617 kb on - strand at 3864.617 kb on - strand at 3864.617 kb on - strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.637 kb on + strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.923 kb on + strand at 3864.923 kb on + strand at 3864.923 kb on + strand at 3864.923 kb on + strand at 3864.923 kb on + strand at 3864.923 kb on + strand at 3864.933 kb on + strand at 3864.934 kb on + strand at 3864.944 kb on + strand at 3864.968 kb on + strand at 3864.968 kb on + strand at 3864.968 kb on + strand at 3864.968 kb on + strand at 3864.976 kb on - strand at 3864.979 kb on + strand at 3864.979 kb on + strand at 3864.979 kb on + strand at 3864.985 kb on + strand at 3865.002 kb on + strand at 3865.002 kb on + strand at 3865.002 kb on + strand at 3865.002 kb on + strand at 3865.002 kb on + strand at 3865.002 kb on + strand at 3865.042 kb on + strand at 3865.067 kb on + strand, within BWI76_RS18640 at 3865.125 kb on - strand, within BWI76_RS18640 at 3865.196 kb on + strand, within BWI76_RS18640 at 3865.209 kb on - strand, within BWI76_RS18640 at 3865.227 kb on + strand, within BWI76_RS18640 at 3865.335 kb on + strand, within BWI76_RS18640 at 3865.335 kb on + strand, within BWI76_RS18640 at 3865.346 kb on + strand, within BWI76_RS18640 at 3865.356 kb on + strand, within BWI76_RS18640 at 3865.356 kb on + strand, within BWI76_RS18640 at 3865.357 kb on - strand, within BWI76_RS18640 at 3865.363 kb on + strand, within BWI76_RS18640 at 3865.363 kb on + strand, within BWI76_RS18640 at 3865.365 kb on + strand, within BWI76_RS18640 at 3865.365 kb on + strand, within BWI76_RS18640 at 3865.375 kb on + strand, within BWI76_RS18640 at 3865.375 kb on + strand, within BWI76_RS18640 at 3865.380 kb on + strand, within BWI76_RS18640 at 3865.384 kb on + strand, within BWI76_RS18640 at 3865.547 kb on + strand at 3865.580 kb on + strand at 3865.588 kb on + strand at 3865.588 kb on - strand at 3865.590 kb on - strand at 3865.593 kb on + strand at 3865.594 kb on + strand at 3865.623 kb on + strand, within BWI76_RS18645 at 3865.633 kb on + strand, within BWI76_RS18645 at 3865.672 kb on + strand, within BWI76_RS18645 at 3865.680 kb on - strand, within BWI76_RS18645 at 3865.685 kb on - strand, within BWI76_RS18645 at 3865.687 kb on - strand, within BWI76_RS18645 at 3865.704 kb on + strand, within BWI76_RS18645 at 3865.721 kb on - strand, within BWI76_RS18645 at 3865.726 kb on - strand, within BWI76_RS18645 at 3865.726 kb on - strand, within BWI76_RS18645 at 3865.756 kb on + strand, within BWI76_RS18645 at 3865.759 kb on - strand, within BWI76_RS18645 at 3865.761 kb on + strand, within BWI76_RS18645 at 3865.887 kb on - strand, within BWI76_RS18645 at 3865.907 kb on - strand, within BWI76_RS18645 at 3865.909 kb on + strand, within BWI76_RS18645 at 3865.990 kb on + strand, within BWI76_RS18645 at 3866.119 kb on + strand at 3866.394 kb on + strand, within BWI76_RS18650 at 3866.404 kb on + strand, within BWI76_RS18650 at 3866.438 kb on + strand, within BWI76_RS18650
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,864,285 + -0.5 3,864,312 + +0.2 3,864,318 + +2.8 3,864,388 - -0.6 3,864,391 + -1.2 3,864,412 - -2.1 3,864,508 + -1.8 3,864,609 + -0.2 3,864,617 - +0.6 3,864,617 - -1.8 3,864,617 - -1.1 3,864,624 + +0.2 3,864,624 + -0.4 3,864,624 + +1.8 3,864,624 + -0.3 3,864,632 - -2.0 3,864,632 - +0.2 3,864,632 - -1.2 3,864,632 - -1.1 3,864,632 - -0.3 3,864,632 - -1.2 3,864,632 - +0.0 3,864,632 - -0.8 3,864,632 - +0.5 3,864,632 - +1.2 3,864,632 - -1.4 3,864,632 - +0.7 3,864,632 - -2.1 3,864,632 - +0.5 3,864,635 - +0.1 3,864,635 - -1.2 3,864,635 - -1.9 3,864,635 - -1.4 3,864,635 - +3.0 3,864,635 - -0.5 3,864,635 - +0.1 3,864,635 - -0.9 3,864,635 - +0.9 3,864,637 + -1.5 3,864,645 - -0.2 3,864,645 - -1.2 3,864,645 - +0.3 3,864,645 - -0.7 3,864,645 - +1.0 3,864,923 + +0.7 3,864,923 + -0.4 3,864,923 + +0.3 3,864,923 + +0.2 3,864,923 + -0.8 3,864,923 + +0.1 3,864,933 + +0.2 3,864,934 + -0.4 3,864,944 + -0.2 3,864,968 + -1.6 3,864,968 + +0.5 3,864,968 + +0.4 3,864,968 + -0.2 3,864,976 - +0.5 3,864,979 + -0.0 3,864,979 + -0.3 3,864,979 + +0.9 3,864,985 + -0.0 3,865,002 + +1.9 3,865,002 + +0.7 3,865,002 + +0.1 3,865,002 + +0.6 3,865,002 + -1.6 3,865,002 + +0.7 3,865,042 + +0.6 3,865,067 + BWI76_RS18640 0.12 -1.1 3,865,125 - BWI76_RS18640 0.24 -1.0 3,865,196 + BWI76_RS18640 0.38 -0.9 3,865,209 - BWI76_RS18640 0.41 +1.2 3,865,227 + BWI76_RS18640 0.44 -1.8 3,865,335 + BWI76_RS18640 0.66 -0.7 3,865,335 + BWI76_RS18640 0.66 +0.1 3,865,346 + BWI76_RS18640 0.68 +0.0 3,865,356 + BWI76_RS18640 0.70 -0.7 3,865,356 + BWI76_RS18640 0.70 -1.0 3,865,357 - BWI76_RS18640 0.70 -1.0 3,865,363 + BWI76_RS18640 0.71 -3.0 3,865,363 + BWI76_RS18640 0.71 +1.0 3,865,365 + BWI76_RS18640 0.72 -0.7 3,865,365 + BWI76_RS18640 0.72 -0.7 3,865,375 + BWI76_RS18640 0.74 -0.3 3,865,375 + BWI76_RS18640 0.74 -0.0 3,865,380 + BWI76_RS18640 0.75 -0.4 3,865,384 + BWI76_RS18640 0.76 +1.2 3,865,547 + +0.8 3,865,580 + -2.0 3,865,588 + +1.2 3,865,588 - +1.0 3,865,590 - -0.1 3,865,593 + +0.0 3,865,594 + -0.5 3,865,623 + BWI76_RS18645 0.14 -0.5 3,865,633 + BWI76_RS18645 0.16 -0.1 3,865,672 + BWI76_RS18645 0.23 +4.1 3,865,680 - BWI76_RS18645 0.25 -2.3 3,865,685 - BWI76_RS18645 0.26 -0.3 3,865,687 - BWI76_RS18645 0.26 -1.0 3,865,704 + BWI76_RS18645 0.29 +1.0 3,865,721 - BWI76_RS18645 0.32 +0.6 3,865,726 - BWI76_RS18645 0.33 +1.0 3,865,726 - BWI76_RS18645 0.33 -1.4 3,865,756 + BWI76_RS18645 0.39 +0.9 3,865,759 - BWI76_RS18645 0.39 -1.1 3,865,761 + BWI76_RS18645 0.40 -1.2 3,865,887 - BWI76_RS18645 0.63 -2.4 3,865,907 - BWI76_RS18645 0.66 -2.1 3,865,909 + BWI76_RS18645 0.67 +0.8 3,865,990 + BWI76_RS18645 0.82 +0.4 3,866,119 + -0.2 3,866,394 + BWI76_RS18650 0.43 +0.6 3,866,404 + BWI76_RS18650 0.45 -0.2 3,866,438 + BWI76_RS18650 0.51 -0.2
Or see this region's nucleotide sequence