Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22510

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_22505 and AO356_22510 are separated by 293 nucleotides AO356_22505: AO356_22505 - TonB-dependent receptor, at 5,029,316 to 5,031,715 _22505 AO356_22510: AO356_22510 - glyoxalase, at 5,032,009 to 5,032,440 _22510 Position (kb) 5032 5033Strain fitness (log2 ratio) -1 0 1 2at 5031.018 kb on - strand, within AO356_22505at 5031.044 kb on + strand, within AO356_22505at 5031.044 kb on + strand, within AO356_22505at 5031.045 kb on - strand, within AO356_22505at 5031.057 kb on - strand, within AO356_22505at 5031.181 kb on + strand, within AO356_22505at 5031.181 kb on + strand, within AO356_22505at 5031.248 kb on + strand, within AO356_22505at 5031.484 kb on - strandat 5031.484 kb on - strandat 5031.524 kb on + strandat 5031.524 kb on + strandat 5031.524 kb on + strandat 5031.525 kb on - strandat 5031.525 kb on - strandat 5031.636 kb on - strandat 5031.636 kb on - strandat 5031.730 kb on - strandat 5031.759 kb on - strandat 5031.797 kb on + strandat 5031.798 kb on - strandat 5031.816 kb on + strandat 5031.816 kb on + strandat 5031.816 kb on + strandat 5031.816 kb on + strandat 5031.816 kb on + strandat 5031.817 kb on - strandat 5031.892 kb on + strandat 5031.953 kb on + strandat 5031.953 kb on + strandat 5031.963 kb on - strandat 5031.963 kb on - strandat 5032.016 kb on + strandat 5032.016 kb on + strandat 5032.016 kb on + strandat 5032.017 kb on - strandat 5032.017 kb on - strandat 5032.020 kb on + strandat 5032.020 kb on + strandat 5032.041 kb on - strandat 5032.100 kb on + strand, within AO356_22510at 5032.100 kb on + strand, within AO356_22510at 5032.100 kb on + strand, within AO356_22510at 5032.100 kb on + strand, within AO356_22510at 5032.100 kb on + strand, within AO356_22510at 5032.100 kb on + strand, within AO356_22510at 5032.101 kb on - strand, within AO356_22510at 5032.101 kb on - strand, within AO356_22510at 5032.101 kb on - strand, within AO356_22510at 5032.105 kb on + strand, within AO356_22510at 5032.105 kb on + strand, within AO356_22510at 5032.106 kb on - strand, within AO356_22510at 5032.157 kb on + strand, within AO356_22510at 5032.157 kb on + strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.158 kb on - strand, within AO356_22510at 5032.250 kb on + strand, within AO356_22510at 5032.251 kb on - strand, within AO356_22510at 5032.251 kb on - strand, within AO356_22510at 5032.343 kb on + strand, within AO356_22510at 5032.343 kb on + strand, within AO356_22510at 5032.343 kb on + strand, within AO356_22510at 5032.343 kb on + strand, within AO356_22510at 5032.344 kb on - strand, within AO356_22510at 5032.344 kb on - strand, within AO356_22510at 5032.349 kb on + strand, within AO356_22510at 5032.349 kb on + strand, within AO356_22510at 5032.350 kb on - strand, within AO356_22510at 5032.350 kb on - strand, within AO356_22510at 5032.387 kb on + strand, within AO356_22510at 5032.394 kb on + strand, within AO356_22510at 5032.394 kb on + strand, within AO356_22510at 5032.395 kb on - strand, within AO356_22510at 5032.395 kb on - strand, within AO356_22510at 5032.404 kb on - strandat 5032.404 kb on - strandat 5032.476 kb on - strandat 5032.510 kb on - strandat 5032.581 kb on + strandat 5032.582 kb on - strandat 5032.582 kb on - strandat 5032.582 kb on - strandat 5032.582 kb on - strandat 5032.643 kb on + strandat 5032.643 kb on + strandat 5032.643 kb on + strandat 5032.644 kb on - strandat 5032.644 kb on - strandat 5032.645 kb on + strandat 5032.646 kb on - strandat 5032.688 kb on + strandat 5032.689 kb on - strandat 5032.756 kb on - strandat 5032.882 kb on - strandat 5032.901 kb on + strandat 5032.941 kb on - strandat 5032.953 kb on + strandat 5033.197 kb on - strandat 5033.269 kb on + strandat 5033.305 kb on - strandat 5033.332 kb on + strandat 5033.436 kb on - strandat 5033.436 kb on - strandat 5033.436 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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5,031,018 - AO356_22505 0.71 -0.0
5,031,044 + AO356_22505 0.72 -0.4
5,031,044 + AO356_22505 0.72 -0.2
5,031,045 - AO356_22505 0.72 +0.4
5,031,057 - AO356_22505 0.73 -0.3
5,031,181 + AO356_22505 0.78 -0.2
5,031,181 + AO356_22505 0.78 -0.4
5,031,248 + AO356_22505 0.81 +0.9
5,031,484 - +0.7
5,031,484 - -0.0
5,031,524 + +0.1
5,031,524 + -0.0
5,031,524 + -0.2
5,031,525 - -0.0
5,031,525 - +0.3
5,031,636 - +0.3
5,031,636 - +0.7
5,031,730 - -0.3
5,031,759 - +1.2
5,031,797 + +0.8
5,031,798 - +0.4
5,031,816 + -0.7
5,031,816 + -0.1
5,031,816 + +0.3
5,031,816 + -0.7
5,031,816 + +0.6
5,031,817 - -0.6
5,031,892 + +0.5
5,031,953 + -1.2
5,031,953 + +0.4
5,031,963 - +0.6
5,031,963 - +0.8
5,032,016 + +0.3
5,032,016 + -1.2
5,032,016 + -0.4
5,032,017 - +0.5
5,032,017 - -0.3
5,032,020 + -0.5
5,032,020 + +0.8
5,032,041 - -0.4
5,032,100 + AO356_22510 0.21 +0.4
5,032,100 + AO356_22510 0.21 +0.9
5,032,100 + AO356_22510 0.21 +1.6
5,032,100 + AO356_22510 0.21 +0.4
5,032,100 + AO356_22510 0.21 +0.3
5,032,100 + AO356_22510 0.21 -0.1
5,032,101 - AO356_22510 0.21 +0.7
5,032,101 - AO356_22510 0.21 -0.4
5,032,101 - AO356_22510 0.21 +0.1
5,032,105 + AO356_22510 0.22 +0.4
5,032,105 + AO356_22510 0.22 +0.5
5,032,106 - AO356_22510 0.22 -0.3
5,032,157 + AO356_22510 0.34 -0.0
5,032,157 + AO356_22510 0.34 +0.2
5,032,158 - AO356_22510 0.34 +0.3
5,032,158 - AO356_22510 0.34 +0.3
5,032,158 - AO356_22510 0.34 +2.1
5,032,158 - AO356_22510 0.34 +0.4
5,032,158 - AO356_22510 0.34 +0.4
5,032,158 - AO356_22510 0.34 +0.2
5,032,250 + AO356_22510 0.56 +0.6
5,032,251 - AO356_22510 0.56 +0.1
5,032,251 - AO356_22510 0.56 +0.3
5,032,343 + AO356_22510 0.77 +0.2
5,032,343 + AO356_22510 0.77 +0.5
5,032,343 + AO356_22510 0.77 +0.4
5,032,343 + AO356_22510 0.77 +0.3
5,032,344 - AO356_22510 0.78 +0.1
5,032,344 - AO356_22510 0.78 +0.6
5,032,349 + AO356_22510 0.79 -0.4
5,032,349 + AO356_22510 0.79 -0.0
5,032,350 - AO356_22510 0.79 +0.8
5,032,350 - AO356_22510 0.79 -0.2
5,032,387 + AO356_22510 0.88 -0.1
5,032,394 + AO356_22510 0.89 +0.5
5,032,394 + AO356_22510 0.89 -0.3
5,032,395 - AO356_22510 0.89 +0.1
5,032,395 - AO356_22510 0.89 +0.6
5,032,404 - +0.1
5,032,404 - +0.3
5,032,476 - +0.3
5,032,510 - +0.1
5,032,581 + +0.1
5,032,582 - -0.1
5,032,582 - +0.8
5,032,582 - -0.5
5,032,582 - -0.1
5,032,643 + +1.3
5,032,643 + +0.3
5,032,643 + -0.6
5,032,644 - -0.3
5,032,644 - +0.1
5,032,645 + +0.8
5,032,646 - +0.2
5,032,688 + +1.1
5,032,689 - +0.6
5,032,756 - -1.1
5,032,882 - +0.4
5,032,901 + +0.9
5,032,941 - +0.0
5,032,953 + +0.1
5,033,197 - -0.9
5,033,269 + +0.3
5,033,305 - +1.2
5,033,332 + -0.3
5,033,436 - +1.1
5,033,436 - +0.3
5,033,436 - -0.7

Or see this region's nucleotide sequence