Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19780 and AO356_19785 overlap by 4 nucleotides AO356_19785 and AO356_19790 are separated by 0 nucleotides AO356_19790 and AO356_19795 are separated by 199 nucleotides
AO356_19780: AO356_19780 - histidine kinase, at 4,435,360 to 4,437,261
_19780
AO356_19785: AO356_19785 - ABC transporter substrate-binding protein, at 4,437,258 to 4,438,190
_19785
AO356_19790: AO356_19790 - TonB-dependent receptor, at 4,438,191 to 4,440,314
_19790
AO356_19795: AO356_19795 - glycerol-3-phosphate dehydrogenase, at 4,440,514 to 4,441,539
_19795
Position (kb)
4438
4439
4440
4441 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4437.231 kb on + strand at 4437.451 kb on + strand, within AO356_19785 at 4437.451 kb on + strand, within AO356_19785 at 4437.451 kb on + strand, within AO356_19785 at 4437.452 kb on - strand, within AO356_19785 at 4437.452 kb on - strand, within AO356_19785 at 4437.520 kb on + strand, within AO356_19785 at 4437.520 kb on + strand, within AO356_19785 at 4437.520 kb on + strand, within AO356_19785 at 4437.521 kb on - strand, within AO356_19785 at 4437.521 kb on - strand, within AO356_19785 at 4437.521 kb on - strand, within AO356_19785 at 4437.559 kb on + strand, within AO356_19785 at 4437.559 kb on + strand, within AO356_19785 at 4437.560 kb on - strand, within AO356_19785 at 4437.560 kb on - strand, within AO356_19785 at 4437.588 kb on + strand, within AO356_19785 at 4437.588 kb on + strand, within AO356_19785 at 4437.588 kb on + strand, within AO356_19785 at 4437.588 kb on + strand, within AO356_19785 at 4437.724 kb on + strand, within AO356_19785 at 4437.992 kb on + strand, within AO356_19785 at 4437.993 kb on - strand, within AO356_19785 at 4437.993 kb on - strand, within AO356_19785 at 4438.192 kb on + strand at 4438.192 kb on + strand at 4438.192 kb on + strand at 4438.192 kb on + strand at 4438.192 kb on + strand at 4438.192 kb on + strand at 4438.216 kb on + strand at 4438.217 kb on - strand at 4438.217 kb on - strand at 4438.217 kb on - strand at 4438.217 kb on - strand at 4438.217 kb on - strand at 4438.387 kb on + strand at 4438.388 kb on - strand at 4438.390 kb on + strand at 4438.390 kb on + strand at 4438.391 kb on - strand at 4438.391 kb on - strand at 4438.501 kb on + strand, within AO356_19790 at 4438.501 kb on + strand, within AO356_19790 at 4438.501 kb on + strand, within AO356_19790 at 4438.501 kb on + strand, within AO356_19790 at 4438.501 kb on + strand, within AO356_19790 at 4438.501 kb on + strand, within AO356_19790 at 4438.502 kb on - strand, within AO356_19790 at 4438.502 kb on - strand, within AO356_19790 at 4438.502 kb on - strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.507 kb on + strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.508 kb on - strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.600 kb on + strand, within AO356_19790 at 4438.601 kb on - strand, within AO356_19790 at 4438.601 kb on - strand, within AO356_19790 at 4438.601 kb on - strand, within AO356_19790 at 4438.691 kb on - strand, within AO356_19790 at 4438.691 kb on - strand, within AO356_19790 at 4438.699 kb on + strand, within AO356_19790 at 4438.700 kb on - strand, within AO356_19790 at 4438.766 kb on - strand, within AO356_19790 at 4438.816 kb on + strand, within AO356_19790 at 4438.817 kb on - strand, within AO356_19790 at 4438.817 kb on - strand, within AO356_19790 at 4438.870 kb on + strand, within AO356_19790 at 4438.871 kb on - strand, within AO356_19790 at 4438.906 kb on + strand, within AO356_19790 at 4438.907 kb on - strand, within AO356_19790 at 4439.056 kb on + strand, within AO356_19790 at 4439.056 kb on + strand, within AO356_19790 at 4439.056 kb on + strand, within AO356_19790 at 4439.056 kb on + strand, within AO356_19790 at 4439.056 kb on + strand, within AO356_19790 at 4439.057 kb on - strand, within AO356_19790 at 4439.057 kb on - strand, within AO356_19790 at 4439.057 kb on - strand, within AO356_19790 at 4439.057 kb on - strand, within AO356_19790 at 4439.057 kb on - strand, within AO356_19790 at 4439.086 kb on + strand, within AO356_19790 at 4439.086 kb on + strand, within AO356_19790 at 4439.086 kb on + strand, within AO356_19790 at 4439.086 kb on + strand, within AO356_19790 at 4439.087 kb on - strand, within AO356_19790 at 4439.087 kb on - strand, within AO356_19790 at 4439.087 kb on - strand, within AO356_19790 at 4439.087 kb on - strand, within AO356_19790 at 4439.284 kb on + strand, within AO356_19790 at 4439.284 kb on + strand, within AO356_19790 at 4439.285 kb on - strand, within AO356_19790 at 4439.285 kb on - strand, within AO356_19790 at 4439.285 kb on - strand, within AO356_19790 at 4439.295 kb on - strand, within AO356_19790 at 4439.317 kb on + strand, within AO356_19790 at 4439.317 kb on + strand, within AO356_19790 at 4439.317 kb on + strand, within AO356_19790 at 4439.317 kb on + strand, within AO356_19790 at 4439.318 kb on - strand, within AO356_19790 at 4439.424 kb on + strand, within AO356_19790 at 4439.424 kb on + strand, within AO356_19790 at 4439.424 kb on + strand, within AO356_19790 at 4439.424 kb on + strand, within AO356_19790 at 4439.424 kb on + strand, within AO356_19790 at 4439.425 kb on - strand, within AO356_19790 at 4439.425 kb on - strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.428 kb on + strand, within AO356_19790 at 4439.429 kb on - strand, within AO356_19790 at 4439.429 kb on - strand, within AO356_19790 at 4439.429 kb on - strand, within AO356_19790 at 4439.429 kb on - strand, within AO356_19790 at 4439.479 kb on + strand, within AO356_19790 at 4439.479 kb on + strand, within AO356_19790 at 4439.479 kb on + strand, within AO356_19790 at 4439.479 kb on + strand, within AO356_19790 at 4439.504 kb on + strand, within AO356_19790 at 4439.505 kb on - strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.542 kb on + strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.543 kb on - strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.546 kb on + strand, within AO356_19790 at 4439.547 kb on - strand, within AO356_19790 at 4439.547 kb on - strand, within AO356_19790 at 4439.547 kb on - strand, within AO356_19790 at 4439.547 kb on - strand, within AO356_19790 at 4439.547 kb on - strand, within AO356_19790 at 4439.548 kb on + strand, within AO356_19790 at 4439.548 kb on + strand, within AO356_19790 at 4439.548 kb on + strand, within AO356_19790 at 4439.549 kb on - strand, within AO356_19790 at 4439.549 kb on - strand, within AO356_19790 at 4439.549 kb on - strand, within AO356_19790 at 4439.872 kb on + strand, within AO356_19790 at 4439.872 kb on + strand, within AO356_19790 at 4439.873 kb on - strand, within AO356_19790 at 4440.034 kb on + strand, within AO356_19790 at 4440.034 kb on + strand, within AO356_19790 at 4440.034 kb on + strand, within AO356_19790 at 4440.034 kb on + strand, within AO356_19790 at 4440.034 kb on + strand, within AO356_19790 at 4440.035 kb on - strand, within AO356_19790 at 4440.035 kb on - strand, within AO356_19790 at 4440.035 kb on - strand, within AO356_19790 at 4440.035 kb on - strand, within AO356_19790 at 4440.204 kb on + strand at 4440.204 kb on + strand at 4440.205 kb on - strand at 4440.352 kb on + strand at 4440.352 kb on + strand at 4440.404 kb on + strand at 4440.404 kb on + strand at 4440.404 kb on + strand at 4440.405 kb on - strand at 4440.431 kb on + strand at 4440.469 kb on + strand at 4440.469 kb on + strand at 4440.470 kb on - strand at 4440.470 kb on - strand at 4440.470 kb on - strand at 4440.472 kb on - strand at 4440.472 kb on - strand at 4440.513 kb on + strand at 4440.513 kb on + strand at 4440.513 kb on + strand at 4440.514 kb on - strand at 4440.514 kb on - strand at 4441.093 kb on + strand, within AO356_19795 at 4441.283 kb on - strand, within AO356_19795
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 4,437,231 + +1.4 4,437,451 + AO356_19785 0.21 +0.7 4,437,451 + AO356_19785 0.21 +0.6 4,437,451 + AO356_19785 0.21 +0.2 4,437,452 - AO356_19785 0.21 -0.9 4,437,452 - AO356_19785 0.21 -0.5 4,437,520 + AO356_19785 0.28 +1.0 4,437,520 + AO356_19785 0.28 +1.1 4,437,520 + AO356_19785 0.28 +1.4 4,437,521 - AO356_19785 0.28 -0.9 4,437,521 - AO356_19785 0.28 -1.1 4,437,521 - AO356_19785 0.28 -0.9 4,437,559 + AO356_19785 0.32 +1.5 4,437,559 + AO356_19785 0.32 +1.0 4,437,560 - AO356_19785 0.32 -0.8 4,437,560 - AO356_19785 0.32 -2.5 4,437,588 + AO356_19785 0.35 +1.2 4,437,588 + AO356_19785 0.35 +1.3 4,437,588 + AO356_19785 0.35 +0.2 4,437,588 + AO356_19785 0.35 +1.4 4,437,724 + AO356_19785 0.50 +1.0 4,437,992 + AO356_19785 0.79 +0.4 4,437,993 - AO356_19785 0.79 -0.7 4,437,993 - AO356_19785 0.79 -1.3 4,438,192 + +2.0 4,438,192 + +0.8 4,438,192 + +1.3 4,438,192 + +1.0 4,438,192 + +2.0 4,438,192 + +1.0 4,438,216 + +1.2 4,438,217 - -0.6 4,438,217 - +0.4 4,438,217 - +0.5 4,438,217 - -0.0 4,438,217 - -0.4 4,438,387 + +1.2 4,438,388 - +0.9 4,438,390 + +2.4 4,438,390 + +1.4 4,438,391 - +0.9 4,438,391 - +1.7 4,438,501 + AO356_19790 0.15 +0.5 4,438,501 + AO356_19790 0.15 +0.5 4,438,501 + AO356_19790 0.15 +0.9 4,438,501 + AO356_19790 0.15 +1.1 4,438,501 + AO356_19790 0.15 +0.9 4,438,501 + AO356_19790 0.15 +1.5 4,438,502 - AO356_19790 0.15 +1.6 4,438,502 - AO356_19790 0.15 +2.3 4,438,502 - AO356_19790 0.15 +1.4 4,438,507 + AO356_19790 0.15 +0.8 4,438,507 + AO356_19790 0.15 +1.5 4,438,507 + AO356_19790 0.15 +1.5 4,438,507 + AO356_19790 0.15 +1.3 4,438,507 + AO356_19790 0.15 +1.1 4,438,507 + AO356_19790 0.15 +2.4 4,438,507 + AO356_19790 0.15 +1.8 4,438,507 + AO356_19790 0.15 +1.1 4,438,507 + AO356_19790 0.15 -0.0 4,438,507 + AO356_19790 0.15 +0.3 4,438,508 - AO356_19790 0.15 +1.3 4,438,508 - AO356_19790 0.15 +1.0 4,438,508 - AO356_19790 0.15 +0.8 4,438,508 - AO356_19790 0.15 +0.3 4,438,508 - AO356_19790 0.15 +1.1 4,438,508 - AO356_19790 0.15 +1.1 4,438,508 - AO356_19790 0.15 +1.3 4,438,508 - AO356_19790 0.15 +1.0 4,438,508 - AO356_19790 0.15 +1.8 4,438,508 - AO356_19790 0.15 +0.4 4,438,600 + AO356_19790 0.19 +2.1 4,438,600 + AO356_19790 0.19 +2.3 4,438,600 + AO356_19790 0.19 +1.2 4,438,600 + AO356_19790 0.19 +0.3 4,438,600 + AO356_19790 0.19 +0.9 4,438,600 + AO356_19790 0.19 +0.6 4,438,600 + AO356_19790 0.19 +1.1 4,438,600 + AO356_19790 0.19 +0.4 4,438,601 - AO356_19790 0.19 +1.6 4,438,601 - AO356_19790 0.19 +1.1 4,438,601 - AO356_19790 0.19 +1.0 4,438,691 - AO356_19790 0.24 +1.2 4,438,691 - AO356_19790 0.24 +1.9 4,438,699 + AO356_19790 0.24 +2.2 4,438,700 - AO356_19790 0.24 +1.3 4,438,766 - AO356_19790 0.27 +0.3 4,438,816 + AO356_19790 0.29 +0.5 4,438,817 - AO356_19790 0.29 +1.4 4,438,817 - AO356_19790 0.29 +1.6 4,438,870 + AO356_19790 0.32 +1.0 4,438,871 - AO356_19790 0.32 +1.3 4,438,906 + AO356_19790 0.34 +1.4 4,438,907 - AO356_19790 0.34 +1.1 4,439,056 + AO356_19790 0.41 +1.0 4,439,056 + AO356_19790 0.41 +0.4 4,439,056 + AO356_19790 0.41 +1.5 4,439,056 + AO356_19790 0.41 +1.5 4,439,056 + AO356_19790 0.41 +1.6 4,439,057 - AO356_19790 0.41 +1.0 4,439,057 - AO356_19790 0.41 +0.4 4,439,057 - AO356_19790 0.41 +1.5 4,439,057 - AO356_19790 0.41 +0.9 4,439,057 - AO356_19790 0.41 +1.9 4,439,086 + AO356_19790 0.42 +1.3 4,439,086 + AO356_19790 0.42 +1.3 4,439,086 + AO356_19790 0.42 +0.9 4,439,086 + AO356_19790 0.42 +1.6 4,439,087 - AO356_19790 0.42 +0.8 4,439,087 - AO356_19790 0.42 +1.2 4,439,087 - AO356_19790 0.42 +1.7 4,439,087 - AO356_19790 0.42 +1.7 4,439,284 + AO356_19790 0.51 +1.5 4,439,284 + AO356_19790 0.51 +0.9 4,439,285 - AO356_19790 0.52 +1.0 4,439,285 - AO356_19790 0.52 +0.8 4,439,285 - AO356_19790 0.52 +1.1 4,439,295 - AO356_19790 0.52 +0.9 4,439,317 + AO356_19790 0.53 +1.7 4,439,317 + AO356_19790 0.53 +0.7 4,439,317 + AO356_19790 0.53 +0.9 4,439,317 + AO356_19790 0.53 +1.4 4,439,318 - AO356_19790 0.53 +1.3 4,439,424 + AO356_19790 0.58 +1.0 4,439,424 + AO356_19790 0.58 +1.2 4,439,424 + AO356_19790 0.58 +1.4 4,439,424 + AO356_19790 0.58 +1.7 4,439,424 + AO356_19790 0.58 +1.0 4,439,425 - AO356_19790 0.58 +1.4 4,439,425 - AO356_19790 0.58 +1.5 4,439,428 + AO356_19790 0.58 +1.0 4,439,428 + AO356_19790 0.58 +1.3 4,439,428 + AO356_19790 0.58 +1.9 4,439,428 + AO356_19790 0.58 +1.8 4,439,428 + AO356_19790 0.58 +1.5 4,439,428 + AO356_19790 0.58 +1.5 4,439,428 + AO356_19790 0.58 +0.9 4,439,428 + AO356_19790 0.58 +1.4 4,439,428 + AO356_19790 0.58 +1.8 4,439,428 + AO356_19790 0.58 +1.5 4,439,428 + AO356_19790 0.58 +1.2 4,439,428 + AO356_19790 0.58 +1.1 4,439,428 + AO356_19790 0.58 +0.8 4,439,428 + AO356_19790 0.58 +1.1 4,439,428 + AO356_19790 0.58 +1.3 4,439,428 + AO356_19790 0.58 +1.0 4,439,429 - AO356_19790 0.58 +0.9 4,439,429 - AO356_19790 0.58 +0.6 4,439,429 - AO356_19790 0.58 +1.8 4,439,429 - AO356_19790 0.58 +1.3 4,439,479 + AO356_19790 0.61 +1.9 4,439,479 + AO356_19790 0.61 +1.2 4,439,479 + AO356_19790 0.61 +1.6 4,439,479 + AO356_19790 0.61 +1.7 4,439,504 + AO356_19790 0.62 +0.9 4,439,505 - AO356_19790 0.62 +1.3 4,439,542 + AO356_19790 0.64 +0.7 4,439,542 + AO356_19790 0.64 +0.9 4,439,542 + AO356_19790 0.64 +0.7 4,439,542 + AO356_19790 0.64 +1.7 4,439,542 + AO356_19790 0.64 +2.3 4,439,542 + AO356_19790 0.64 +1.3 4,439,543 - AO356_19790 0.64 +0.5 4,439,543 - AO356_19790 0.64 +0.7 4,439,543 - AO356_19790 0.64 +1.2 4,439,543 - AO356_19790 0.64 +1.0 4,439,543 - AO356_19790 0.64 +1.1 4,439,543 - AO356_19790 0.64 +1.1 4,439,543 - AO356_19790 0.64 +2.1 4,439,543 - AO356_19790 0.64 +1.1 4,439,546 + AO356_19790 0.64 +2.2 4,439,546 + AO356_19790 0.64 +1.5 4,439,546 + AO356_19790 0.64 +1.0 4,439,546 + AO356_19790 0.64 +1.0 4,439,546 + AO356_19790 0.64 +1.6 4,439,546 + AO356_19790 0.64 +1.6 4,439,546 + AO356_19790 0.64 +1.7 4,439,546 + AO356_19790 0.64 +1.5 4,439,547 - AO356_19790 0.64 +1.0 4,439,547 - AO356_19790 0.64 +1.4 4,439,547 - AO356_19790 0.64 +1.5 4,439,547 - AO356_19790 0.64 +0.7 4,439,547 - AO356_19790 0.64 +2.0 4,439,548 + AO356_19790 0.64 +1.5 4,439,548 + AO356_19790 0.64 +1.3 4,439,548 + AO356_19790 0.64 +0.9 4,439,549 - AO356_19790 0.64 +1.0 4,439,549 - AO356_19790 0.64 +1.7 4,439,549 - AO356_19790 0.64 +1.1 4,439,872 + AO356_19790 0.79 +1.0 4,439,872 + AO356_19790 0.79 +1.6 4,439,873 - AO356_19790 0.79 +0.9 4,440,034 + AO356_19790 0.87 +0.9 4,440,034 + AO356_19790 0.87 +1.7 4,440,034 + AO356_19790 0.87 +1.8 4,440,034 + AO356_19790 0.87 +1.0 4,440,034 + AO356_19790 0.87 +0.7 4,440,035 - AO356_19790 0.87 +0.4 4,440,035 - AO356_19790 0.87 +0.7 4,440,035 - AO356_19790 0.87 +1.4 4,440,035 - AO356_19790 0.87 +1.1 4,440,204 + +0.8 4,440,204 + +0.9 4,440,205 - +0.7 4,440,352 + +0.0 4,440,352 + +1.4 4,440,404 + +0.9 4,440,404 + +0.7 4,440,404 + +0.6 4,440,405 - -1.0 4,440,431 + +1.3 4,440,469 + -0.8 4,440,469 + +0.1 4,440,470 - -0.7 4,440,470 - -0.5 4,440,470 - -2.5 4,440,472 - -1.3 4,440,472 - -0.8 4,440,513 + +0.9 4,440,513 + +0.2 4,440,513 + +0.1 4,440,514 - -2.5 4,440,514 - -0.8 4,441,093 + AO356_19795 0.56 +0.2 4,441,283 - AO356_19795 0.75 -2.6
Or see this region's nucleotide sequence