Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22045

Experiment: LB 10C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_22035 and AO353_22040 are separated by 100 nucleotidesAO353_22040 and AO353_22045 overlap by 4 nucleotidesAO353_22045 and AO353_22050 are separated by 214 nucleotides AO353_22035: AO353_22035 - pyridoxine 5'-phosphate oxidase, at 4,825,997 to 4,826,644 _22035 AO353_22040: AO353_22040 - molybdenum cofactor biosynthesis protein B, at 4,826,745 to 4,827,299 _22040 AO353_22045: AO353_22045 - molybdenum cofactor biosynthesis protein MoaA, at 4,827,296 to 4,828,531 _22045 AO353_22050: AO353_22050 - protease, at 4,828,746 to 4,829,741 _22050 Position (kb) 4827 4828 4829Strain fitness (log2 ratio) -2 -1 0 1 2at 4826.326 kb on + strand, within AO353_22035at 4826.326 kb on + strand, within AO353_22035at 4826.326 kb on + strand, within AO353_22035at 4826.326 kb on + strand, within AO353_22035at 4826.326 kb on + strand, within AO353_22035at 4826.372 kb on + strand, within AO353_22035at 4826.372 kb on + strand, within AO353_22035at 4826.373 kb on - strand, within AO353_22035at 4826.650 kb on + strandat 4826.650 kb on + strandat 4826.650 kb on + strandat 4826.650 kb on + strandat 4826.651 kb on - strandat 4826.667 kb on + strandat 4826.683 kb on + strandat 4826.683 kb on + strandat 4826.683 kb on + strandat 4826.683 kb on + strandat 4826.683 kb on + strandat 4826.684 kb on - strandat 4826.684 kb on - strandat 4826.728 kb on + strandat 4826.728 kb on + strandat 4826.728 kb on + strandat 4826.807 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.906 kb on + strand, within AO353_22040at 4826.907 kb on - strand, within AO353_22040at 4826.907 kb on - strand, within AO353_22040at 4826.907 kb on - strand, within AO353_22040at 4826.907 kb on - strand, within AO353_22040at 4826.910 kb on + strand, within AO353_22040at 4826.910 kb on + strand, within AO353_22040at 4826.911 kb on - strand, within AO353_22040at 4826.911 kb on - strand, within AO353_22040at 4826.911 kb on - strand, within AO353_22040at 4826.911 kb on - strand, within AO353_22040at 4826.929 kb on + strand, within AO353_22040at 4826.929 kb on + strand, within AO353_22040at 4826.930 kb on - strand, within AO353_22040at 4826.965 kb on + strand, within AO353_22040at 4826.966 kb on - strand, within AO353_22040at 4826.966 kb on - strand, within AO353_22040at 4826.966 kb on - strand, within AO353_22040at 4826.966 kb on - strand, within AO353_22040at 4826.966 kb on - strand, within AO353_22040at 4827.005 kb on + strand, within AO353_22040at 4827.006 kb on - strand, within AO353_22040at 4827.488 kb on + strand, within AO353_22045at 4827.718 kb on + strand, within AO353_22045at 4827.718 kb on + strand, within AO353_22045at 4827.719 kb on - strand, within AO353_22045at 4827.754 kb on - strand, within AO353_22045at 4827.813 kb on + strand, within AO353_22045at 4827.911 kb on + strand, within AO353_22045at 4827.911 kb on + strand, within AO353_22045at 4827.911 kb on + strand, within AO353_22045at 4827.912 kb on - strand, within AO353_22045at 4827.912 kb on - strand, within AO353_22045at 4827.912 kb on - strand, within AO353_22045at 4827.974 kb on + strand, within AO353_22045at 4827.974 kb on + strand, within AO353_22045at 4827.975 kb on - strand, within AO353_22045at 4828.071 kb on + strand, within AO353_22045at 4828.072 kb on - strand, within AO353_22045at 4828.625 kb on + strandat 4828.626 kb on - strandat 4828.741 kb on + strandat 4828.741 kb on + strandat 4828.784 kb on - strandat 4828.818 kb on + strandat 4828.819 kb on - strandat 4828.819 kb on - strandat 4828.929 kb on + strand, within AO353_22050at 4828.930 kb on - strand, within AO353_22050at 4829.050 kb on - strand, within AO353_22050at 4829.130 kb on + strand, within AO353_22050at 4829.131 kb on - strand, within AO353_22050at 4829.131 kb on - strand, within AO353_22050at 4829.131 kb on - strand, within AO353_22050at 4829.131 kb on - strand, within AO353_22050at 4829.191 kb on + strand, within AO353_22050at 4829.192 kb on - strand, within AO353_22050at 4829.192 kb on - strand, within AO353_22050at 4829.286 kb on + strand, within AO353_22050at 4829.286 kb on + strand, within AO353_22050at 4829.286 kb on + strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.287 kb on - strand, within AO353_22050at 4829.403 kb on + strand, within AO353_22050at 4829.405 kb on + strand, within AO353_22050at 4829.406 kb on - strand, within AO353_22050

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 10C
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4,826,326 + AO353_22035 0.51 -0.0
4,826,326 + AO353_22035 0.51 -0.0
4,826,326 + AO353_22035 0.51 -0.5
4,826,326 + AO353_22035 0.51 +0.7
4,826,326 + AO353_22035 0.51 +0.1
4,826,372 + AO353_22035 0.58 +0.6
4,826,372 + AO353_22035 0.58 -0.9
4,826,373 - AO353_22035 0.58 -0.1
4,826,650 + +1.3
4,826,650 + -2.2
4,826,650 + +1.5
4,826,650 + -1.0
4,826,651 - +0.2
4,826,667 + -1.3
4,826,683 + -1.0
4,826,683 + +0.2
4,826,683 + +0.2
4,826,683 + +1.9
4,826,683 + +0.6
4,826,684 - -0.5
4,826,684 - -0.5
4,826,728 + -0.8
4,826,728 + -1.4
4,826,728 + +1.3
4,826,807 + AO353_22040 0.11 +1.3
4,826,906 + AO353_22040 0.29 -0.2
4,826,906 + AO353_22040 0.29 +0.4
4,826,906 + AO353_22040 0.29 +0.2
4,826,906 + AO353_22040 0.29 +0.1
4,826,906 + AO353_22040 0.29 +0.1
4,826,906 + AO353_22040 0.29 -0.6
4,826,906 + AO353_22040 0.29 -0.3
4,826,906 + AO353_22040 0.29 +0.1
4,826,906 + AO353_22040 0.29 -2.0
4,826,907 - AO353_22040 0.29 -0.1
4,826,907 - AO353_22040 0.29 +0.8
4,826,907 - AO353_22040 0.29 +0.1
4,826,907 - AO353_22040 0.29 -0.5
4,826,910 + AO353_22040 0.30 -1.4
4,826,910 + AO353_22040 0.30 +0.6
4,826,911 - AO353_22040 0.30 -0.1
4,826,911 - AO353_22040 0.30 +1.9
4,826,911 - AO353_22040 0.30 -2.3
4,826,911 - AO353_22040 0.30 +0.3
4,826,929 + AO353_22040 0.33 -0.0
4,826,929 + AO353_22040 0.33 -0.4
4,826,930 - AO353_22040 0.33 +1.9
4,826,965 + AO353_22040 0.40 -2.3
4,826,966 - AO353_22040 0.40 -0.0
4,826,966 - AO353_22040 0.40 +0.7
4,826,966 - AO353_22040 0.40 -0.3
4,826,966 - AO353_22040 0.40 +0.6
4,826,966 - AO353_22040 0.40 -1.5
4,827,005 + AO353_22040 0.47 +1.3
4,827,006 - AO353_22040 0.47 +0.3
4,827,488 + AO353_22045 0.16 -0.7
4,827,718 + AO353_22045 0.34 -0.1
4,827,718 + AO353_22045 0.34 -1.0
4,827,719 - AO353_22045 0.34 -0.1
4,827,754 - AO353_22045 0.37 -1.8
4,827,813 + AO353_22045 0.42 -0.1
4,827,911 + AO353_22045 0.50 -0.9
4,827,911 + AO353_22045 0.50 -1.2
4,827,911 + AO353_22045 0.50 +0.2
4,827,912 - AO353_22045 0.50 -0.6
4,827,912 - AO353_22045 0.50 +1.3
4,827,912 - AO353_22045 0.50 -0.8
4,827,974 + AO353_22045 0.55 -1.0
4,827,974 + AO353_22045 0.55 -1.0
4,827,975 - AO353_22045 0.55 -0.3
4,828,071 + AO353_22045 0.63 -0.5
4,828,072 - AO353_22045 0.63 -0.2
4,828,625 + -0.7
4,828,626 - +0.4
4,828,741 + -0.1
4,828,741 + +0.9
4,828,784 - +0.8
4,828,818 + +0.4
4,828,819 - +0.5
4,828,819 - +1.3
4,828,929 + AO353_22050 0.18 +0.6
4,828,930 - AO353_22050 0.18 -0.4
4,829,050 - AO353_22050 0.31 +0.6
4,829,130 + AO353_22050 0.39 -0.7
4,829,131 - AO353_22050 0.39 -0.1
4,829,131 - AO353_22050 0.39 +0.6
4,829,131 - AO353_22050 0.39 +1.0
4,829,131 - AO353_22050 0.39 +0.6
4,829,191 + AO353_22050 0.45 -0.8
4,829,192 - AO353_22050 0.45 -1.1
4,829,192 - AO353_22050 0.45 +0.1
4,829,286 + AO353_22050 0.54 +2.0
4,829,286 + AO353_22050 0.54 +0.8
4,829,286 + AO353_22050 0.54 +0.5
4,829,287 - AO353_22050 0.54 -0.6
4,829,287 - AO353_22050 0.54 -0.6
4,829,287 - AO353_22050 0.54 +0.4
4,829,287 - AO353_22050 0.54 +0.2
4,829,287 - AO353_22050 0.54 -0.3
4,829,287 - AO353_22050 0.54 +0.3
4,829,287 - AO353_22050 0.54 -0.0
4,829,403 + AO353_22050 0.66 +1.3
4,829,405 + AO353_22050 0.66 +0.6
4,829,406 - AO353_22050 0.66 -0.2

Or see this region's nucleotide sequence