Experiment: 6 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1361 and DvMF_1362 are separated by 182 nucleotides DvMF_1362 and DvMF_1363 are separated by 59 nucleotides DvMF_1363 and DvMF_1364 are separated by 320 nucleotides
DvMF_1361: DvMF_1361 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 1,665,536 to 1,668,274
_1361
DvMF_1362: DvMF_1362 - hypothetical protein (RefSeq), at 1,668,457 to 1,668,852
_1362
DvMF_1363: DvMF_1363 - hypothetical protein (RefSeq), at 1,668,912 to 1,670,654
_1363
DvMF_1364: DvMF_1364 - ferric uptake regulator, Fur family (RefSeq), at 1,670,975 to 1,671,433
_1364
Position (kb)
1668
1669
1670
1671 Strain fitness (log2 ratio)
-1
0
1 at 1667.993 kb on - strand, within DvMF_1361 at 1668.179 kb on - strand at 1668.182 kb on - strand at 1668.184 kb on - strand at 1668.378 kb on - strand at 1668.603 kb on + strand, within DvMF_1362 at 1668.671 kb on + strand, within DvMF_1362 at 1668.679 kb on - strand, within DvMF_1362 at 1668.698 kb on + strand, within DvMF_1362 at 1668.732 kb on - strand, within DvMF_1362 at 1668.974 kb on - strand at 1668.990 kb on + strand at 1669.150 kb on + strand, within DvMF_1363 at 1669.264 kb on + strand, within DvMF_1363 at 1669.474 kb on + strand, within DvMF_1363 at 1669.475 kb on - strand, within DvMF_1363 at 1669.689 kb on - strand, within DvMF_1363 at 1670.027 kb on + strand, within DvMF_1363 at 1670.074 kb on + strand, within DvMF_1363 at 1670.569 kb on + strand at 1670.650 kb on + strand at 1671.476 kb on - strand at 1671.476 kb on - strand at 1671.480 kb on + strand at 1671.581 kb on + strand at 1671.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 37C remove 1,667,993 - DvMF_1361 0.90 +0.1 1,668,179 - -0.1 1,668,182 - -0.0 1,668,184 - +0.7 1,668,378 - +0.1 1,668,603 + DvMF_1362 0.37 +0.6 1,668,671 + DvMF_1362 0.54 +1.0 1,668,679 - DvMF_1362 0.56 +0.5 1,668,698 + DvMF_1362 0.61 +0.7 1,668,732 - DvMF_1362 0.69 +0.1 1,668,974 - +0.2 1,668,990 + -0.0 1,669,150 + DvMF_1363 0.14 +0.9 1,669,264 + DvMF_1363 0.20 +1.6 1,669,474 + DvMF_1363 0.32 +0.6 1,669,475 - DvMF_1363 0.32 +0.3 1,669,689 - DvMF_1363 0.45 +0.6 1,670,027 + DvMF_1363 0.64 +0.5 1,670,074 + DvMF_1363 0.67 +1.0 1,670,569 + +0.0 1,670,650 + +0.7 1,671,476 - +0.3 1,671,476 - +0.3 1,671,480 + +0.6 1,671,581 + +0.4 1,671,589 - +0.6
Or see this region's nucleotide sequence