Experiment: 6 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0844 and DvMF_0845 are separated by 111 nucleotides DvMF_0845 and DvMF_0846 are separated by 13 nucleotides DvMF_0846 and DvMF_0847 are separated by 438 nucleotides DvMF_0847 and DvMF_0848 are separated by 136 nucleotides
DvMF_0844: DvMF_0844 - Sua5/YciO/YrdC/YwlC family protein (RefSeq), at 1,020,483 to 1,021,139
_0844
DvMF_0845: DvMF_0845 - protein of unknown function DUF163 (RefSeq), at 1,021,251 to 1,021,718
_0845
DvMF_0846: DvMF_0846 - hypothetical protein (RefSeq), at 1,021,732 to 1,024,080
_0846
DvMF_0847: DvMF_0847 - hypothetical protein (RefSeq), at 1,024,519 to 1,024,737
_0847
DvMF_0848: DvMF_0848 - glucose inhibited division protein (RefSeq), at 1,024,874 to 1,025,650
_0848
Position (kb)
1021
1022
1023
1024
1025 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1021.210 kb on + strand at 1021.481 kb on + strand, within DvMF_0845 at 1021.489 kb on - strand, within DvMF_0845 at 1021.676 kb on - strand at 1022.071 kb on - strand, within DvMF_0846 at 1023.003 kb on + strand, within DvMF_0846 at 1023.062 kb on - strand, within DvMF_0846 at 1023.113 kb on + strand, within DvMF_0846 at 1023.402 kb on + strand, within DvMF_0846 at 1023.829 kb on + strand, within DvMF_0846 at 1023.841 kb on + strand, within DvMF_0846 at 1023.865 kb on + strand at 1024.200 kb on + strand at 1024.250 kb on - strand at 1024.302 kb on + strand at 1024.312 kb on + strand at 1024.646 kb on - strand, within DvMF_0847 at 1025.018 kb on + strand, within DvMF_0848 at 1025.058 kb on + strand, within DvMF_0848
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 37C remove 1,021,210 + +0.2 1,021,481 + DvMF_0845 0.49 +0.2 1,021,489 - DvMF_0845 0.51 +0.2 1,021,676 - +1.2 1,022,071 - DvMF_0846 0.14 -2.5 1,023,003 + DvMF_0846 0.54 -3.5 1,023,062 - DvMF_0846 0.57 -2.9 1,023,113 + DvMF_0846 0.59 -2.3 1,023,402 + DvMF_0846 0.71 -3.8 1,023,829 + DvMF_0846 0.89 -2.6 1,023,841 + DvMF_0846 0.90 -2.6 1,023,865 + -2.9 1,024,200 + +0.4 1,024,250 - -0.3 1,024,302 + +0.2 1,024,312 + -0.3 1,024,646 - DvMF_0847 0.58 +0.7 1,025,018 + DvMF_0848 0.19 -0.2 1,025,058 + DvMF_0848 0.24 +0.1
Or see this region's nucleotide sequence