Experiment: L-Glutamic (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4221 and Ga0059261_4222 overlap by 4 nucleotides Ga0059261_4222 and Ga0059261_4223 are separated by 85 nucleotides Ga0059261_4223 and Ga0059261_4224 are separated by 3 nucleotides Ga0059261_4224 and Ga0059261_4225 are separated by 96 nucleotides Ga0059261_4225 and Ga0059261_4226 overlap by 38 nucleotides
Ga0059261_4221: Ga0059261_4221 - Transcriptional regulators, at 4,374,690 to 4,375,172
_4221
Ga0059261_4222: Ga0059261_4222 - Enoyl-CoA hydratase/carnithine racemase, at 4,375,169 to 4,375,933
_4222
Ga0059261_4223: Ga0059261_4223 - 3-isopropylmalate dehydratase, large subunit, at 4,376,019 to 4,377,455
_4223
Ga0059261_4224: Ga0059261_4224 - hypothetical protein, at 4,377,459 to 4,377,599
_4224
Ga0059261_4225: Ga0059261_4225 - 3-isopropylmalate dehydratase, small subunit, at 4,377,696 to 4,378,325
_4225
Ga0059261_4226: Ga0059261_4226 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 4,378,288 to 4,379,289
_4226
Position (kb)
4376
4377
4378 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.285 kb on - strand, within Ga0059261_4222 at 4375.479 kb on + strand, within Ga0059261_4222 at 4375.489 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.857 kb on + strand at 4375.857 kb on + strand at 4375.857 kb on + strand at 4375.858 kb on - strand at 4375.858 kb on - strand at 4375.858 kb on - strand at 4376.004 kb on + strand at 4376.004 kb on + strand at 4376.004 kb on + strand at 4376.005 kb on - strand at 4376.005 kb on - strand at 4376.043 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.106 kb on - strand at 4376.106 kb on - strand at 4376.195 kb on + strand, within Ga0059261_4223 at 4376.195 kb on + strand, within Ga0059261_4223 at 4376.195 kb on + strand at 4376.195 kb on + strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.196 kb on - strand, within Ga0059261_4223 at 4376.216 kb on + strand, within Ga0059261_4223 at 4376.216 kb on + strand, within Ga0059261_4223 at 4376.217 kb on - strand, within Ga0059261_4223 at 4376.217 kb on - strand, within Ga0059261_4223 at 4376.334 kb on + strand, within Ga0059261_4223 at 4376.334 kb on + strand, within Ga0059261_4223 at 4376.335 kb on - strand, within Ga0059261_4223 at 4376.521 kb on + strand, within Ga0059261_4223 at 4376.522 kb on - strand, within Ga0059261_4223 at 4376.522 kb on - strand, within Ga0059261_4223 at 4376.522 kb on - strand, within Ga0059261_4223 at 4376.522 kb on - strand, within Ga0059261_4223 at 4376.522 kb on - strand, within Ga0059261_4223 at 4376.640 kb on + strand, within Ga0059261_4223 at 4376.641 kb on - strand at 4376.641 kb on - strand, within Ga0059261_4223 at 4376.652 kb on + strand, within Ga0059261_4223 at 4376.652 kb on + strand, within Ga0059261_4223 at 4376.652 kb on + strand, within Ga0059261_4223 at 4376.652 kb on + strand, within Ga0059261_4223 at 4376.652 kb on + strand, within Ga0059261_4223 at 4376.653 kb on - strand, within Ga0059261_4223 at 4376.653 kb on - strand, within Ga0059261_4223 at 4376.655 kb on - strand, within Ga0059261_4223 at 4376.770 kb on - strand, within Ga0059261_4223 at 4376.862 kb on + strand, within Ga0059261_4223 at 4376.862 kb on + strand, within Ga0059261_4223 at 4376.862 kb on + strand, within Ga0059261_4223 at 4376.863 kb on - strand, within Ga0059261_4223 at 4376.863 kb on - strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.018 kb on + strand, within Ga0059261_4223 at 4377.019 kb on - strand, within Ga0059261_4223 at 4377.019 kb on - strand, within Ga0059261_4223 at 4377.019 kb on - strand, within Ga0059261_4223 at 4377.019 kb on - strand, within Ga0059261_4223 at 4377.019 kb on - strand, within Ga0059261_4223 at 4377.020 kb on + strand, within Ga0059261_4223 at 4377.020 kb on + strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.021 kb on - strand, within Ga0059261_4223 at 4377.347 kb on - strand at 4377.445 kb on + strand at 4377.445 kb on + strand at 4377.445 kb on + strand at 4377.446 kb on - strand at 4377.446 kb on - strand at 4377.446 kb on - strand at 4377.446 kb on - strand at 4377.446 kb on - strand at 4377.519 kb on + strand, within Ga0059261_4224 at 4377.519 kb on + strand, within Ga0059261_4224 at 4377.519 kb on + strand, within Ga0059261_4224 at 4377.662 kb on - strand at 4377.750 kb on - strand at 4377.750 kb on - strand at 4377.870 kb on + strand, within Ga0059261_4225 at 4377.920 kb on + strand, within Ga0059261_4225 at 4377.984 kb on + strand, within Ga0059261_4225 at 4377.984 kb on + strand, within Ga0059261_4225 at 4377.984 kb on + strand, within Ga0059261_4225 at 4377.985 kb on - strand, within Ga0059261_4225 at 4377.985 kb on - strand, within Ga0059261_4225 at 4378.129 kb on - strand, within Ga0059261_4225 at 4378.409 kb on - strand, within Ga0059261_4226 at 4378.409 kb on - strand, within Ga0059261_4226 at 4378.434 kb on + strand, within Ga0059261_4226 at 4378.434 kb on + strand, within Ga0059261_4226 at 4378.435 kb on - strand, within Ga0059261_4226 at 4378.435 kb on - strand, within Ga0059261_4226 at 4378.438 kb on + strand, within Ga0059261_4226 at 4378.438 kb on + strand, within Ga0059261_4226 at 4378.439 kb on - strand, within Ga0059261_4226 at 4378.439 kb on - strand, within Ga0059261_4226 at 4378.439 kb on - strand, within Ga0059261_4226
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C); no added vitamins remove 4,375,262 + Ga0059261_4222 0.12 -0.5 4,375,262 + Ga0059261_4222 0.12 -0.3 4,375,262 + Ga0059261_4222 0.12 -0.1 4,375,262 + Ga0059261_4222 0.12 +0.1 4,375,262 + Ga0059261_4222 0.12 +0.9 4,375,263 - Ga0059261_4222 0.12 +0.5 4,375,263 - Ga0059261_4222 0.12 -0.0 4,375,263 - Ga0059261_4222 0.12 +0.0 4,375,263 - Ga0059261_4222 0.12 -0.1 4,375,263 - Ga0059261_4222 0.12 -0.2 4,375,285 - Ga0059261_4222 0.15 +0.4 4,375,479 + Ga0059261_4222 0.41 -0.5 4,375,489 + Ga0059261_4222 0.42 +0.8 4,375,514 + Ga0059261_4222 0.45 +0.2 4,375,514 + Ga0059261_4222 0.45 -0.1 4,375,514 + Ga0059261_4222 0.45 +0.7 4,375,515 - Ga0059261_4222 0.45 +0.2 4,375,515 - Ga0059261_4222 0.45 +0.1 4,375,515 - Ga0059261_4222 0.45 +0.1 4,375,515 - Ga0059261_4222 0.45 +0.6 4,375,515 - Ga0059261_4222 0.45 -0.6 4,375,857 + -0.7 4,375,857 + +0.2 4,375,857 + +0.4 4,375,858 - +1.0 4,375,858 - +0.3 4,375,858 - +0.3 4,376,004 + -1.6 4,376,004 + -2.7 4,376,004 + -2.9 4,376,005 - -4.1 4,376,005 - -4.9 4,376,043 + -3.8 4,376,103 + -4.7 4,376,103 + -3.0 4,376,103 + -4.0 4,376,103 + -3.3 4,376,103 + -4.5 4,376,103 + -5.1 4,376,103 + -5.9 4,376,103 + -3.5 4,376,103 + -2.7 4,376,103 + -5.0 4,376,104 - -3.3 4,376,104 - -4.5 4,376,104 - -4.9 4,376,104 - -4.0 4,376,104 - -5.0 4,376,104 - -6.2 4,376,104 - -0.4 4,376,104 - -4.3 4,376,104 - -5.2 4,376,104 - -4.0 4,376,104 - -4.0 4,376,104 - -5.7 4,376,104 - -4.9 4,376,106 - -2.6 4,376,106 - -4.8 4,376,195 + Ga0059261_4223 0.12 -5.6 4,376,195 + Ga0059261_4223 0.12 -3.8 4,376,195 + -2.3 4,376,195 + Ga0059261_4223 0.12 -5.1 4,376,196 - Ga0059261_4223 0.12 -4.7 4,376,196 - Ga0059261_4223 0.12 -5.6 4,376,196 - Ga0059261_4223 0.12 -3.5 4,376,196 - Ga0059261_4223 0.12 -6.4 4,376,196 - Ga0059261_4223 0.12 -5.1 4,376,196 - Ga0059261_4223 0.12 -5.0 4,376,216 + Ga0059261_4223 0.14 -3.9 4,376,216 + Ga0059261_4223 0.14 -1.7 4,376,217 - Ga0059261_4223 0.14 -3.8 4,376,217 - Ga0059261_4223 0.14 -3.0 4,376,334 + Ga0059261_4223 0.22 -4.4 4,376,334 + Ga0059261_4223 0.22 -3.9 4,376,335 - Ga0059261_4223 0.22 -1.4 4,376,521 + Ga0059261_4223 0.35 -4.2 4,376,522 - Ga0059261_4223 0.35 -4.8 4,376,522 - Ga0059261_4223 0.35 -4.3 4,376,522 - Ga0059261_4223 0.35 -5.3 4,376,522 - Ga0059261_4223 0.35 -5.1 4,376,522 - Ga0059261_4223 0.35 -3.7 4,376,640 + Ga0059261_4223 0.43 -5.1 4,376,641 - -2.5 4,376,641 - Ga0059261_4223 0.43 -4.4 4,376,652 + Ga0059261_4223 0.44 -2.1 4,376,652 + Ga0059261_4223 0.44 -6.0 4,376,652 + Ga0059261_4223 0.44 -3.9 4,376,652 + Ga0059261_4223 0.44 -4.8 4,376,652 + Ga0059261_4223 0.44 -4.6 4,376,653 - Ga0059261_4223 0.44 -3.8 4,376,653 - Ga0059261_4223 0.44 -4.5 4,376,655 - Ga0059261_4223 0.44 -4.2 4,376,770 - Ga0059261_4223 0.52 -3.9 4,376,862 + Ga0059261_4223 0.59 -4.0 4,376,862 + Ga0059261_4223 0.59 -5.6 4,376,862 + Ga0059261_4223 0.59 -4.1 4,376,863 - Ga0059261_4223 0.59 -6.0 4,376,863 - Ga0059261_4223 0.59 -5.8 4,377,018 + Ga0059261_4223 0.70 -4.0 4,377,018 + Ga0059261_4223 0.70 -3.9 4,377,018 + Ga0059261_4223 0.70 -4.7 4,377,018 + Ga0059261_4223 0.70 -3.3 4,377,018 + Ga0059261_4223 0.70 -4.8 4,377,018 + Ga0059261_4223 0.70 -4.5 4,377,018 + Ga0059261_4223 0.70 -3.4 4,377,018 + Ga0059261_4223 0.70 -4.4 4,377,018 + Ga0059261_4223 0.70 -4.5 4,377,019 - Ga0059261_4223 0.70 -2.6 4,377,019 - Ga0059261_4223 0.70 -4.2 4,377,019 - Ga0059261_4223 0.70 -4.8 4,377,019 - Ga0059261_4223 0.70 -2.3 4,377,019 - Ga0059261_4223 0.70 -4.7 4,377,020 + Ga0059261_4223 0.70 -2.0 4,377,020 + Ga0059261_4223 0.70 -5.2 4,377,021 - Ga0059261_4223 0.70 -4.5 4,377,021 - Ga0059261_4223 0.70 -3.5 4,377,021 - Ga0059261_4223 0.70 -3.8 4,377,021 - Ga0059261_4223 0.70 -4.3 4,377,021 - Ga0059261_4223 0.70 -3.5 4,377,021 - Ga0059261_4223 0.70 -3.7 4,377,021 - Ga0059261_4223 0.70 -2.4 4,377,021 - Ga0059261_4223 0.70 -3.7 4,377,347 - -1.7 4,377,445 + -1.2 4,377,445 + -0.7 4,377,445 + -0.6 4,377,446 - -4.9 4,377,446 - -2.9 4,377,446 - -4.9 4,377,446 - -5.0 4,377,446 - -3.0 4,377,519 + Ga0059261_4224 0.43 +1.0 4,377,519 + Ga0059261_4224 0.43 -1.0 4,377,519 + Ga0059261_4224 0.43 +0.9 4,377,662 - -4.4 4,377,750 - -2.5 4,377,750 - -4.4 4,377,870 + Ga0059261_4225 0.28 -4.8 4,377,920 + Ga0059261_4225 0.36 -5.0 4,377,984 + Ga0059261_4225 0.46 -4.9 4,377,984 + Ga0059261_4225 0.46 -5.2 4,377,984 + Ga0059261_4225 0.46 -6.1 4,377,985 - Ga0059261_4225 0.46 -5.6 4,377,985 - Ga0059261_4225 0.46 -4.5 4,378,129 - Ga0059261_4225 0.69 -4.4 4,378,409 - Ga0059261_4226 0.12 +0.7 4,378,409 - Ga0059261_4226 0.12 +0.8 4,378,434 + Ga0059261_4226 0.15 +1.5 4,378,434 + Ga0059261_4226 0.15 -0.0 4,378,435 - Ga0059261_4226 0.15 -0.3 4,378,435 - Ga0059261_4226 0.15 +0.8 4,378,438 + Ga0059261_4226 0.15 +0.7 4,378,438 + Ga0059261_4226 0.15 -0.9 4,378,439 - Ga0059261_4226 0.15 +0.3 4,378,439 - Ga0059261_4226 0.15 +0.3 4,378,439 - Ga0059261_4226 0.15 -0.7
Or see this region's nucleotide sequence