Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07765

Experiment: D-Glucosamine Hydrochloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_07760 and AO356_07765 overlap by 4 nucleotidesAO356_07765 and AO356_07770 overlap by 4 nucleotides AO356_07760: AO356_07760 - toxin, at 1,726,111 to 1,730,679 _07760 AO356_07765: AO356_07765 - toxin, at 1,730,676 to 1,735,163 _07765 AO356_07770: AO356_07770 - toxin, at 1,735,160 to 1,737,958 _07770 Position (kb) 1730 1731 1732 1733 1734 1735 1736Strain fitness (log2 ratio) -2 -1 0 1 2at 1729.876 kb on + strand, within AO356_07760at 1729.877 kb on - strand, within AO356_07760at 1729.877 kb on - strand, within AO356_07760at 1729.877 kb on - strand, within AO356_07760at 1729.877 kb on - strand, within AO356_07760at 1729.907 kb on + strand, within AO356_07760at 1729.907 kb on + strand, within AO356_07760at 1729.907 kb on + strand, within AO356_07760at 1729.908 kb on - strand, within AO356_07760at 1729.915 kb on + strand, within AO356_07760at 1729.915 kb on + strand, within AO356_07760at 1729.916 kb on - strand, within AO356_07760at 1729.916 kb on - strand, within AO356_07760at 1729.916 kb on - strand, within AO356_07760at 1729.948 kb on + strand, within AO356_07760at 1729.949 kb on - strand, within AO356_07760at 1729.961 kb on - strand, within AO356_07760at 1730.008 kb on + strand, within AO356_07760at 1730.009 kb on - strand, within AO356_07760at 1730.066 kb on - strand, within AO356_07760at 1730.168 kb on + strand, within AO356_07760at 1730.169 kb on - strand, within AO356_07760at 1730.169 kb on - strand, within AO356_07760at 1730.296 kb on + strandat 1730.296 kb on + strandat 1730.296 kb on + strandat 1730.296 kb on + strandat 1730.297 kb on - strandat 1730.315 kb on - strandat 1730.368 kb on + strandat 1730.368 kb on + strandat 1730.533 kb on + strandat 1730.533 kb on + strandat 1730.548 kb on + strandat 1730.647 kb on + strandat 1730.647 kb on + strandat 1730.647 kb on + strandat 1730.648 kb on - strandat 1730.648 kb on - strandat 1730.648 kb on - strandat 1730.648 kb on - strandat 1730.790 kb on + strandat 1730.791 kb on - strandat 1730.850 kb on + strandat 1730.850 kb on + strandat 1730.851 kb on - strandat 1730.851 kb on - strandat 1730.943 kb on + strandat 1730.943 kb on + strandat 1730.943 kb on + strandat 1730.944 kb on - strandat 1730.944 kb on - strandat 1731.028 kb on - strandat 1731.028 kb on - strandat 1731.039 kb on + strandat 1731.039 kb on + strandat 1731.039 kb on + strandat 1731.039 kb on + strandat 1731.040 kb on - strandat 1731.040 kb on - strandat 1731.067 kb on - strandat 1731.069 kb on - strandat 1731.081 kb on + strandat 1731.081 kb on + strandat 1731.294 kb on + strand, within AO356_07765at 1731.300 kb on + strand, within AO356_07765at 1731.300 kb on + strand, within AO356_07765at 1731.300 kb on + strand, within AO356_07765at 1731.301 kb on - strand, within AO356_07765at 1731.301 kb on - strand, within AO356_07765at 1731.301 kb on - strand, within AO356_07765at 1731.327 kb on + strand, within AO356_07765at 1731.456 kb on + strand, within AO356_07765at 1731.457 kb on - strand, within AO356_07765at 1731.474 kb on + strand, within AO356_07765at 1731.475 kb on - strand, within AO356_07765at 1731.475 kb on - strand, within AO356_07765at 1731.636 kb on + strand, within AO356_07765at 1731.637 kb on - strand, within AO356_07765at 1731.637 kb on - strand, within AO356_07765at 1731.738 kb on + strand, within AO356_07765at 1731.739 kb on - strand, within AO356_07765at 1731.911 kb on + strand, within AO356_07765at 1731.933 kb on + strand, within AO356_07765at 1731.934 kb on - strand, within AO356_07765at 1731.934 kb on - strand, within AO356_07765at 1731.988 kb on + strand, within AO356_07765at 1731.988 kb on + strand, within AO356_07765at 1731.988 kb on + strand, within AO356_07765at 1731.989 kb on - strand, within AO356_07765at 1732.215 kb on + strand, within AO356_07765at 1732.216 kb on - strand, within AO356_07765at 1732.291 kb on + strand, within AO356_07765at 1732.292 kb on - strand, within AO356_07765at 1732.292 kb on - strand, within AO356_07765at 1732.333 kb on + strand, within AO356_07765at 1732.334 kb on - strand, within AO356_07765at 1732.334 kb on - strand, within AO356_07765at 1732.334 kb on - strand, within AO356_07765at 1732.453 kb on - strand, within AO356_07765at 1732.521 kb on + strand, within AO356_07765at 1732.521 kb on + strand, within AO356_07765at 1732.522 kb on - strand, within AO356_07765at 1732.522 kb on - strand, within AO356_07765at 1732.614 kb on + strand, within AO356_07765at 1732.713 kb on + strand, within AO356_07765at 1732.713 kb on + strand, within AO356_07765at 1732.738 kb on - strand, within AO356_07765at 1732.912 kb on + strand, within AO356_07765at 1732.956 kb on + strand, within AO356_07765at 1732.956 kb on + strand, within AO356_07765at 1732.957 kb on - strand, within AO356_07765at 1732.957 kb on - strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.959 kb on + strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.960 kb on - strand, within AO356_07765at 1732.999 kb on + strand, within AO356_07765at 1733.118 kb on + strand, within AO356_07765at 1733.119 kb on - strand, within AO356_07765at 1733.415 kb on + strand, within AO356_07765at 1733.611 kb on - strand, within AO356_07765at 1733.613 kb on + strand, within AO356_07765at 1733.613 kb on + strand, within AO356_07765at 1733.614 kb on - strand, within AO356_07765at 1733.950 kb on + strand, within AO356_07765at 1733.951 kb on - strand, within AO356_07765at 1733.983 kb on + strand, within AO356_07765at 1733.983 kb on + strand, within AO356_07765at 1733.984 kb on - strand, within AO356_07765at 1734.000 kb on + strand, within AO356_07765at 1734.100 kb on - strand, within AO356_07765at 1734.115 kb on + strand, within AO356_07765at 1734.116 kb on - strand, within AO356_07765at 1734.116 kb on - strand, within AO356_07765at 1734.116 kb on - strand, within AO356_07765at 1734.116 kb on - strand, within AO356_07765at 1734.163 kb on - strand, within AO356_07765at 1734.163 kb on - strand, within AO356_07765at 1734.219 kb on + strand, within AO356_07765at 1734.219 kb on + strand, within AO356_07765at 1734.220 kb on - strand, within AO356_07765at 1734.225 kb on + strand, within AO356_07765at 1734.271 kb on + strand, within AO356_07765at 1734.272 kb on - strand, within AO356_07765at 1734.272 kb on - strand, within AO356_07765at 1734.305 kb on - strand, within AO356_07765at 1734.451 kb on - strand, within AO356_07765at 1734.451 kb on - strand, within AO356_07765at 1734.453 kb on + strand, within AO356_07765at 1734.453 kb on + strand, within AO356_07765at 1734.789 kb on + strandat 1734.789 kb on + strandat 1734.789 kb on + strandat 1734.789 kb on + strandat 1734.789 kb on + strandat 1734.789 kb on + strandat 1734.790 kb on - strandat 1734.790 kb on - strandat 1734.790 kb on - strandat 1734.790 kb on - strandat 1734.885 kb on + strandat 1734.885 kb on + strandat 1734.886 kb on - strandat 1734.886 kb on - strandat 1734.911 kb on + strandat 1734.911 kb on + strandat 1734.911 kb on + strandat 1734.912 kb on - strandat 1734.915 kb on + strandat 1734.916 kb on - strandat 1734.916 kb on - strandat 1734.916 kb on - strandat 1734.916 kb on - strandat 1734.924 kb on + strandat 1734.925 kb on - strandat 1734.925 kb on - strandat 1734.925 kb on - strandat 1734.996 kb on + strandat 1734.997 kb on - strandat 1734.997 kb on - strandat 1734.997 kb on - strandat 1735.020 kb on + strandat 1735.020 kb on + strandat 1735.020 kb on + strandat 1735.020 kb on + strandat 1735.021 kb on - strandat 1735.021 kb on - strandat 1735.021 kb on - strandat 1735.021 kb on - strandat 1735.053 kb on + strandat 1735.054 kb on - strandat 1735.054 kb on - strandat 1735.067 kb on + strandat 1735.083 kb on + strandat 1735.083 kb on + strandat 1735.238 kb on + strandat 1735.239 kb on - strandat 1735.292 kb on + strandat 1735.293 kb on - strandat 1735.293 kb on - strandat 1735.293 kb on - strandat 1735.411 kb on + strandat 1735.433 kb on + strandat 1735.433 kb on + strandat 1735.487 kb on + strand, within AO356_07770at 1735.488 kb on - strand, within AO356_07770at 1735.502 kb on + strand, within AO356_07770at 1735.502 kb on + strand, within AO356_07770at 1735.502 kb on + strand, within AO356_07770at 1735.502 kb on + strand, within AO356_07770at 1735.503 kb on - strand, within AO356_07770at 1735.503 kb on - strand, within AO356_07770at 1735.503 kb on - strand, within AO356_07770at 1735.580 kb on + strand, within AO356_07770at 1735.755 kb on + strand, within AO356_07770at 1735.755 kb on + strand, within AO356_07770at 1735.756 kb on - strand, within AO356_07770at 1735.791 kb on - strand, within AO356_07770at 1735.828 kb on + strand, within AO356_07770at 1735.865 kb on + strand, within AO356_07770at 1735.866 kb on - strand, within AO356_07770at 1735.866 kb on - strand, within AO356_07770at 1735.911 kb on + strand, within AO356_07770at 1735.911 kb on + strand, within AO356_07770at 1735.911 kb on + strand, within AO356_07770at 1735.912 kb on - strand, within AO356_07770at 1735.955 kb on + strand, within AO356_07770at 1735.955 kb on + strand, within AO356_07770at 1735.955 kb on + strand, within AO356_07770at 1735.955 kb on + strand, within AO356_07770at 1735.956 kb on - strand, within AO356_07770at 1735.956 kb on - strand, within AO356_07770at 1735.956 kb on - strand, within AO356_07770at 1736.018 kb on + strand, within AO356_07770at 1736.018 kb on + strand, within AO356_07770at 1736.019 kb on - strand, within AO356_07770at 1736.019 kb on - strand, within AO356_07770at 1736.035 kb on + strand, within AO356_07770at 1736.035 kb on + strand, within AO356_07770at 1736.036 kb on - strand, within AO356_07770at 1736.096 kb on + strand, within AO356_07770at 1736.097 kb on - strand, within AO356_07770at 1736.097 kb on - strand, within AO356_07770at 1736.159 kb on - strand, within AO356_07770

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N)
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1,729,876 + AO356_07760 0.82 -1.5
1,729,877 - AO356_07760 0.82 +0.1
1,729,877 - AO356_07760 0.82 -0.2
1,729,877 - AO356_07760 0.82 -0.1
1,729,877 - AO356_07760 0.82 -0.3
1,729,907 + AO356_07760 0.83 +0.3
1,729,907 + AO356_07760 0.83 -0.1
1,729,907 + AO356_07760 0.83 -0.1
1,729,908 - AO356_07760 0.83 +0.4
1,729,915 + AO356_07760 0.83 +0.6
1,729,915 + AO356_07760 0.83 +0.0
1,729,916 - AO356_07760 0.83 -0.0
1,729,916 - AO356_07760 0.83 +0.4
1,729,916 - AO356_07760 0.83 -0.2
1,729,948 + AO356_07760 0.84 -0.6
1,729,949 - AO356_07760 0.84 +0.7
1,729,961 - AO356_07760 0.84 -0.1
1,730,008 + AO356_07760 0.85 +0.7
1,730,009 - AO356_07760 0.85 +0.4
1,730,066 - AO356_07760 0.87 +0.4
1,730,168 + AO356_07760 0.89 +0.1
1,730,169 - AO356_07760 0.89 +0.4
1,730,169 - AO356_07760 0.89 +0.4
1,730,296 + +0.3
1,730,296 + +1.1
1,730,296 + +0.5
1,730,296 + -0.8
1,730,297 - +0.5
1,730,315 - +0.2
1,730,368 + +0.6
1,730,368 + -0.2
1,730,533 + +0.0
1,730,533 + +2.0
1,730,548 + +0.0
1,730,647 + +0.1
1,730,647 + +0.3
1,730,647 + +0.5
1,730,648 - +1.4
1,730,648 - +0.6
1,730,648 - -0.4
1,730,648 - -0.0
1,730,790 + -0.4
1,730,791 - +0.1
1,730,850 + -0.7
1,730,850 + +1.0
1,730,851 - +0.1
1,730,851 - +0.9
1,730,943 + +0.9
1,730,943 + +0.1
1,730,943 + -0.3
1,730,944 - -1.9
1,730,944 - -1.1
1,731,028 - +0.6
1,731,028 - +0.3
1,731,039 + +1.5
1,731,039 + -0.4
1,731,039 + -0.6
1,731,039 + -1.5
1,731,040 - +0.5
1,731,040 - -0.8
1,731,067 - -0.5
1,731,069 - +0.3
1,731,081 + +0.2
1,731,081 + +0.7
1,731,294 + AO356_07765 0.14 -0.5
1,731,300 + AO356_07765 0.14 -0.0
1,731,300 + AO356_07765 0.14 -0.6
1,731,300 + AO356_07765 0.14 -0.2
1,731,301 - AO356_07765 0.14 -0.3
1,731,301 - AO356_07765 0.14 -0.7
1,731,301 - AO356_07765 0.14 -0.1
1,731,327 + AO356_07765 0.15 +0.8
1,731,456 + AO356_07765 0.17 +0.9
1,731,457 - AO356_07765 0.17 +0.1
1,731,474 + AO356_07765 0.18 +1.0
1,731,475 - AO356_07765 0.18 +0.2
1,731,475 - AO356_07765 0.18 +0.6
1,731,636 + AO356_07765 0.21 +0.4
1,731,637 - AO356_07765 0.21 -0.3
1,731,637 - AO356_07765 0.21 +0.9
1,731,738 + AO356_07765 0.24 +1.2
1,731,739 - AO356_07765 0.24 +1.5
1,731,911 + AO356_07765 0.28 +1.0
1,731,933 + AO356_07765 0.28 +0.6
1,731,934 - AO356_07765 0.28 +0.3
1,731,934 - AO356_07765 0.28 +2.1
1,731,988 + AO356_07765 0.29 +1.3
1,731,988 + AO356_07765 0.29 -1.3
1,731,988 + AO356_07765 0.29 +0.6
1,731,989 - AO356_07765 0.29 +0.5
1,732,215 + AO356_07765 0.34 +0.4
1,732,216 - AO356_07765 0.34 +2.0
1,732,291 + AO356_07765 0.36 -1.2
1,732,292 - AO356_07765 0.36 -2.6
1,732,292 - AO356_07765 0.36 +0.6
1,732,333 + AO356_07765 0.37 +0.4
1,732,334 - AO356_07765 0.37 +0.5
1,732,334 - AO356_07765 0.37 +0.7
1,732,334 - AO356_07765 0.37 -0.3
1,732,453 - AO356_07765 0.40 +0.8
1,732,521 + AO356_07765 0.41 +1.1
1,732,521 + AO356_07765 0.41 -1.1
1,732,522 - AO356_07765 0.41 -1.6
1,732,522 - AO356_07765 0.41 +0.2
1,732,614 + AO356_07765 0.43 -0.2
1,732,713 + AO356_07765 0.45 +0.4
1,732,713 + AO356_07765 0.45 +0.6
1,732,738 - AO356_07765 0.46 +0.0
1,732,912 + AO356_07765 0.50 +0.0
1,732,956 + AO356_07765 0.51 +0.5
1,732,956 + AO356_07765 0.51 +1.5
1,732,957 - AO356_07765 0.51 -1.0
1,732,957 - AO356_07765 0.51 -0.8
1,732,959 + AO356_07765 0.51 +0.3
1,732,959 + AO356_07765 0.51 +1.1
1,732,959 + AO356_07765 0.51 +0.1
1,732,959 + AO356_07765 0.51 +0.1
1,732,959 + AO356_07765 0.51 +1.5
1,732,959 + AO356_07765 0.51 -0.5
1,732,959 + AO356_07765 0.51 +1.0
1,732,959 + AO356_07765 0.51 +0.9
1,732,960 - AO356_07765 0.51 +0.1
1,732,960 - AO356_07765 0.51 -1.9
1,732,960 - AO356_07765 0.51 -0.2
1,732,960 - AO356_07765 0.51 -0.4
1,732,960 - AO356_07765 0.51 +0.6
1,732,960 - AO356_07765 0.51 -0.0
1,732,999 + AO356_07765 0.52 +0.1
1,733,118 + AO356_07765 0.54 -0.2
1,733,119 - AO356_07765 0.54 +1.0
1,733,415 + AO356_07765 0.61 -0.7
1,733,611 - AO356_07765 0.65 -0.4
1,733,613 + AO356_07765 0.65 +0.7
1,733,613 + AO356_07765 0.65 +1.0
1,733,614 - AO356_07765 0.65 -0.0
1,733,950 + AO356_07765 0.73 -0.3
1,733,951 - AO356_07765 0.73 -0.8
1,733,983 + AO356_07765 0.74 +0.0
1,733,983 + AO356_07765 0.74 +0.1
1,733,984 - AO356_07765 0.74 +0.6
1,734,000 + AO356_07765 0.74 +0.1
1,734,100 - AO356_07765 0.76 +0.4
1,734,115 + AO356_07765 0.77 -0.4
1,734,116 - AO356_07765 0.77 -0.3
1,734,116 - AO356_07765 0.77 +0.5
1,734,116 - AO356_07765 0.77 +0.3
1,734,116 - AO356_07765 0.77 +0.2
1,734,163 - AO356_07765 0.78 +1.8
1,734,163 - AO356_07765 0.78 +0.1
1,734,219 + AO356_07765 0.79 +0.4
1,734,219 + AO356_07765 0.79 -1.2
1,734,220 - AO356_07765 0.79 +0.1
1,734,225 + AO356_07765 0.79 -0.7
1,734,271 + AO356_07765 0.80 +1.2
1,734,272 - AO356_07765 0.80 +0.1
1,734,272 - AO356_07765 0.80 +0.3
1,734,305 - AO356_07765 0.81 +1.2
1,734,451 - AO356_07765 0.84 +0.1
1,734,451 - AO356_07765 0.84 +1.0
1,734,453 + AO356_07765 0.84 -0.8
1,734,453 + AO356_07765 0.84 +0.3
1,734,789 + +0.5
1,734,789 + -0.2
1,734,789 + -0.3
1,734,789 + -0.1
1,734,789 + +0.4
1,734,789 + +0.5
1,734,790 - +0.1
1,734,790 - -0.6
1,734,790 - -0.1
1,734,790 - -0.8
1,734,885 + +0.4
1,734,885 + -0.4
1,734,886 - -2.5
1,734,886 - +0.6
1,734,911 + -0.7
1,734,911 + +0.4
1,734,911 + +1.3
1,734,912 - -0.8
1,734,915 + +0.1
1,734,916 - -0.9
1,734,916 - +0.3
1,734,916 - +1.0
1,734,916 - +1.1
1,734,924 + +0.6
1,734,925 - +0.4
1,734,925 - +0.9
1,734,925 - -0.2
1,734,996 + +0.2
1,734,997 - +0.3
1,734,997 - +0.3
1,734,997 - -0.2
1,735,020 + +0.3
1,735,020 + +0.5
1,735,020 + +0.4
1,735,020 + +0.4
1,735,021 - +0.8
1,735,021 - -0.6
1,735,021 - -0.2
1,735,021 - +0.1
1,735,053 + +0.2
1,735,054 - -0.0
1,735,054 - +0.6
1,735,067 + +1.7
1,735,083 + -0.7
1,735,083 + -0.3
1,735,238 + +0.9
1,735,239 - +0.3
1,735,292 + +0.5
1,735,293 - -0.1
1,735,293 - +0.4
1,735,293 - -0.6
1,735,411 + +0.0
1,735,433 + -0.7
1,735,433 + -0.5
1,735,487 + AO356_07770 0.12 +0.3
1,735,488 - AO356_07770 0.12 -1.0
1,735,502 + AO356_07770 0.12 +0.2
1,735,502 + AO356_07770 0.12 +0.7
1,735,502 + AO356_07770 0.12 +1.0
1,735,502 + AO356_07770 0.12 +0.9
1,735,503 - AO356_07770 0.12 -0.4
1,735,503 - AO356_07770 0.12 +0.3
1,735,503 - AO356_07770 0.12 +1.4
1,735,580 + AO356_07770 0.15 -0.1
1,735,755 + AO356_07770 0.21 +0.3
1,735,755 + AO356_07770 0.21 +0.4
1,735,756 - AO356_07770 0.21 -2.0
1,735,791 - AO356_07770 0.23 +0.3
1,735,828 + AO356_07770 0.24 -0.6
1,735,865 + AO356_07770 0.25 -0.3
1,735,866 - AO356_07770 0.25 +0.4
1,735,866 - AO356_07770 0.25 +0.1
1,735,911 + AO356_07770 0.27 -0.7
1,735,911 + AO356_07770 0.27 +0.7
1,735,911 + AO356_07770 0.27 +0.3
1,735,912 - AO356_07770 0.27 +0.3
1,735,955 + AO356_07770 0.28 +0.4
1,735,955 + AO356_07770 0.28 +0.1
1,735,955 + AO356_07770 0.28 +0.6
1,735,955 + AO356_07770 0.28 +1.3
1,735,956 - AO356_07770 0.28 +0.5
1,735,956 - AO356_07770 0.28 -0.1
1,735,956 - AO356_07770 0.28 +0.1
1,736,018 + AO356_07770 0.31 +0.5
1,736,018 + AO356_07770 0.31 +0.3
1,736,019 - AO356_07770 0.31 +0.3
1,736,019 - AO356_07770 0.31 +1.4
1,736,035 + AO356_07770 0.31 +0.6
1,736,035 + AO356_07770 0.31 +1.1
1,736,036 - AO356_07770 0.31 -0.4
1,736,096 + AO356_07770 0.33 +1.2
1,736,097 - AO356_07770 0.33 +0.3
1,736,097 - AO356_07770 0.33 +0.2
1,736,159 - AO356_07770 0.36 +0.5

Or see this region's nucleotide sequence