Experiment: 5 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1641 and DvMF_1642 are separated by 2 nucleotides DvMF_1642 and DvMF_1643 are separated by 2 nucleotides DvMF_1643 and DvMF_1644 are separated by 105 nucleotides
DvMF_1641: DvMF_1641 - hypothetical protein (RefSeq), at 2,021,613 to 2,022,518
_1641
DvMF_1642: DvMF_1642 - hypothetical protein (RefSeq), at 2,022,521 to 2,022,874
_1642
DvMF_1643: DvMF_1643 - phage tape measure protein (RefSeq), at 2,022,877 to 2,025,693
_1643
DvMF_1644: DvMF_1644 - hypothetical protein (RefSeq), at 2,025,799 to 2,026,587
_1644
Position (kb)
2022
2023
2024
2025
2026 Strain fitness (log2 ratio)
-1
0
1
2 at 2021.904 kb on - strand, within DvMF_1641 at 2022.016 kb on + strand, within DvMF_1641 at 2022.024 kb on - strand, within DvMF_1641 at 2022.120 kb on + strand, within DvMF_1641 at 2022.138 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.186 kb on - strand, within DvMF_1641 at 2022.238 kb on - strand, within DvMF_1641 at 2022.258 kb on + strand, within DvMF_1641 at 2022.311 kb on - strand, within DvMF_1641 at 2022.334 kb on - strand, within DvMF_1641 at 2022.461 kb on + strand at 2022.514 kb on + strand at 2022.522 kb on - strand at 2022.549 kb on - strand at 2022.654 kb on + strand, within DvMF_1642 at 2022.908 kb on + strand at 2023.079 kb on - strand at 2023.230 kb on + strand, within DvMF_1643 at 2023.292 kb on + strand, within DvMF_1643 at 2023.315 kb on - strand, within DvMF_1643 at 2023.355 kb on + strand, within DvMF_1643 at 2023.574 kb on - strand, within DvMF_1643 at 2023.815 kb on + strand, within DvMF_1643 at 2023.967 kb on + strand, within DvMF_1643 at 2023.967 kb on + strand, within DvMF_1643 at 2023.967 kb on + strand, within DvMF_1643 at 2024.058 kb on + strand, within DvMF_1643 at 2024.132 kb on + strand, within DvMF_1643 at 2024.467 kb on + strand, within DvMF_1643 at 2024.475 kb on - strand, within DvMF_1643 at 2024.504 kb on + strand, within DvMF_1643 at 2024.698 kb on + strand, within DvMF_1643 at 2024.698 kb on + strand, within DvMF_1643 at 2024.764 kb on - strand, within DvMF_1643 at 2024.874 kb on - strand, within DvMF_1643 at 2025.025 kb on + strand, within DvMF_1643 at 2025.075 kb on - strand, within DvMF_1643 at 2025.285 kb on + strand, within DvMF_1643 at 2025.384 kb on + strand, within DvMF_1643 at 2025.581 kb on + strand at 2025.595 kb on - strand at 2025.622 kb on + strand at 2025.622 kb on + strand at 2025.813 kb on - strand at 2026.138 kb on - strand, within DvMF_1644 at 2026.404 kb on + strand, within DvMF_1644 at 2026.498 kb on + strand, within DvMF_1644
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 37C remove 2,021,904 - DvMF_1641 0.32 +0.9 2,022,016 + DvMF_1641 0.44 +1.3 2,022,024 - DvMF_1641 0.45 +1.1 2,022,120 + DvMF_1641 0.56 +1.1 2,022,138 - DvMF_1641 0.58 +1.3 2,022,175 - DvMF_1641 0.62 +2.1 2,022,175 - DvMF_1641 0.62 +1.1 2,022,175 - DvMF_1641 0.62 +1.0 2,022,186 - DvMF_1641 0.63 +1.3 2,022,238 - DvMF_1641 0.69 +1.7 2,022,258 + DvMF_1641 0.71 +1.4 2,022,311 - DvMF_1641 0.77 +0.9 2,022,334 - DvMF_1641 0.80 +1.3 2,022,461 + +0.7 2,022,514 + +0.8 2,022,522 - +0.8 2,022,549 - +1.1 2,022,654 + DvMF_1642 0.38 +1.2 2,022,908 + +2.5 2,023,079 - +1.3 2,023,230 + DvMF_1643 0.13 +1.1 2,023,292 + DvMF_1643 0.15 +1.4 2,023,315 - DvMF_1643 0.16 +0.6 2,023,355 + DvMF_1643 0.17 +1.0 2,023,574 - DvMF_1643 0.25 +1.1 2,023,815 + DvMF_1643 0.33 +1.4 2,023,967 + DvMF_1643 0.39 +0.8 2,023,967 + DvMF_1643 0.39 +1.1 2,023,967 + DvMF_1643 0.39 +1.2 2,024,058 + DvMF_1643 0.42 +1.1 2,024,132 + DvMF_1643 0.45 +1.1 2,024,467 + DvMF_1643 0.56 +0.7 2,024,475 - DvMF_1643 0.57 +0.2 2,024,504 + DvMF_1643 0.58 +0.5 2,024,698 + DvMF_1643 0.65 +1.3 2,024,698 + DvMF_1643 0.65 +0.9 2,024,764 - DvMF_1643 0.67 +1.0 2,024,874 - DvMF_1643 0.71 +0.4 2,025,025 + DvMF_1643 0.76 +1.4 2,025,075 - DvMF_1643 0.78 +1.2 2,025,285 + DvMF_1643 0.85 +1.3 2,025,384 + DvMF_1643 0.89 +0.7 2,025,581 + +0.9 2,025,595 - +1.2 2,025,622 + +1.2 2,025,622 + +1.0 2,025,813 - +1.1 2,026,138 - DvMF_1644 0.43 -0.3 2,026,404 + DvMF_1644 0.77 +0.6 2,026,498 + DvMF_1644 0.89 +0.2
Or see this region's nucleotide sequence