Experiment: 5 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0511 and DvMF_0512 are separated by 358 nucleotides DvMF_0512 and DvMF_0513 are separated by 136 nucleotides
DvMF_0511: DvMF_0511 - transcriptional regulator, LysR family (RefSeq), at 601,559 to 603,658
_0511
DvMF_0512: DvMF_0512 - conserved integral membrane protein (RefSeq), at 604,017 to 604,727
_0512
DvMF_0513: DvMF_0513 - transcriptional regulator, GntR family (RefSeq), at 604,864 to 605,730
_0513
Position (kb) 604
605 Strain fitness (log2 ratio) -1
0
1
2
3 at 603.207 kb on - strand, within DvMF_0511 at 603.207 kb on - strand, within DvMF_0511 at 603.238 kb on + strand, within DvMF_0511 at 603.257 kb on + strand, within DvMF_0511 at 603.265 kb on - strand, within DvMF_0511 at 603.330 kb on + strand, within DvMF_0511 at 603.330 kb on + strand, within DvMF_0511 at 603.337 kb on - strand, within DvMF_0511 at 603.388 kb on - strand, within DvMF_0511 at 603.422 kb on - strand, within DvMF_0511 at 603.438 kb on + strand, within DvMF_0511 at 604.071 kb on - strand at 604.123 kb on + strand, within DvMF_0512 at 604.333 kb on - strand, within DvMF_0512 at 604.356 kb on - strand, within DvMF_0512 at 604.467 kb on - strand, within DvMF_0512 at 604.486 kb on + strand, within DvMF_0512 at 604.513 kb on - strand, within DvMF_0512 at 604.567 kb on + strand, within DvMF_0512 at 604.614 kb on - strand, within DvMF_0512 at 604.868 kb on + strand at 604.876 kb on - strand at 604.923 kb on + strand at 604.994 kb on + strand, within DvMF_0513 at 605.069 kb on - strand, within DvMF_0513 at 605.076 kb on - strand, within DvMF_0513 at 605.216 kb on - strand, within DvMF_0513 at 605.232 kb on + strand, within DvMF_0513 at 605.252 kb on - strand, within DvMF_0513 at 605.272 kb on + strand, within DvMF_0513 at 605.305 kb on + strand, within DvMF_0513 at 605.429 kb on + strand, within DvMF_0513 at 605.450 kb on - strand, within DvMF_0513 at 605.593 kb on + strand, within DvMF_0513
Per-strain Table
Position Strand Gene LocusTag Fraction 5 day starvation, 37C remove 603,207 - DvMF_0511 0.78 +0.8 603,207 - DvMF_0511 0.78 +0.4 603,238 + DvMF_0511 0.80 +0.7 603,257 + DvMF_0511 0.81 +1.0 603,265 - DvMF_0511 0.81 +1.1 603,330 + DvMF_0511 0.84 +0.4 603,330 + DvMF_0511 0.84 +0.8 603,337 - DvMF_0511 0.85 +1.3 603,388 - DvMF_0511 0.87 +0.6 603,422 - DvMF_0511 0.89 +1.0 603,438 + DvMF_0511 0.89 +0.3 604,071 - +0.6 604,123 + DvMF_0512 0.15 +0.1 604,333 - DvMF_0512 0.44 +0.1 604,356 - DvMF_0512 0.48 +0.6 604,467 - DvMF_0512 0.63 +0.3 604,486 + DvMF_0512 0.66 +0.4 604,513 - DvMF_0512 0.70 +2.8 604,567 + DvMF_0512 0.77 +0.9 604,614 - DvMF_0512 0.84 +0.7 604,868 + +0.6 604,876 - +0.4 604,923 + +0.8 604,994 + DvMF_0513 0.15 -0.3 605,069 - DvMF_0513 0.24 -1.2 605,076 - DvMF_0513 0.24 -1.6 605,216 - DvMF_0513 0.41 -1.2 605,232 + DvMF_0513 0.42 -1.6 605,252 - DvMF_0513 0.45 -1.3 605,272 + DvMF_0513 0.47 -1.2 605,305 + DvMF_0513 0.51 -0.9 605,429 + DvMF_0513 0.65 -1.5 605,450 - DvMF_0513 0.68 -1.0 605,593 + DvMF_0513 0.84 -1.2
Or see this region's nucleotide sequence