Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4466

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
5,198,548	+				+1.4
5,198,552	+				-0.0
5,198,671	+				+1.1
5,198,671	+				+0.7
5,198,671	+				-0.4
5,198,671	+				-2.1
5,198,671	+				+0.1
5,198,671	+				-1.8
5,198,671	+				+0.5
5,198,671	+				+0.2
5,198,671	+				-0.0
5,198,671	+				-0.3
5,198,671	+				+0.5
5,198,671	+				+0.1
5,198,671	+				-0.1
5,198,671	+				-0.5
5,198,672	-				-0.2
5,198,672	-				+1.3
5,198,672	-				+1.0
5,198,672	-				+0.4
5,198,672	-				+2.0
5,198,672	-				-1.7
5,198,672	-				+0.7
5,198,672	-				+2.1
5,198,672	-				+1.5
5,198,672	-				+1.9
5,198,672	-				+0.3
5,198,672	-				-0.3
5,198,672	-				+0.5
5,198,672	-				+1.6
5,198,673	+				+0.3
5,198,673	+				+0.2
5,198,673	+				-0.3
5,198,673	+				+0.6
5,198,674	-				+0.9
5,198,674	-				+0.8
5,198,674	-				+0.6
5,198,674	-				+1.0
5,198,685	+				-1.3
5,198,685	+				+0.5
5,198,686	-				-0.5
5,198,686	-				-0.5
5,198,686	-				-0.3
5,198,689	+				+1.9
5,198,696	+				+1.3
5,198,700	+				-0.2
5,198,723	-				-1.8
5,198,727	+				-1.0
5,198,727	+				-0.4
5,198,727	+				+0.4
5,198,727	+				+0.1
5,198,727	+				+0.8
5,198,727	+				-0.8
5,198,727	+				+1.0
5,198,728	-				-1.0
5,198,728	-				+0.8
5,198,728	-				+0.1
5,198,729	+				+0.0
5,198,729	+				-1.7
5,198,730	-				+0.3
5,198,759	+				+1.6
5,198,759	+				+1.3
5,198,760	-				+0.3
5,198,869	+				+0.1
5,198,869	+				-0.0
5,198,869	+				-0.3
5,198,870	-				+0.1
5,198,882	+				-0.7
5,198,882	+				-0.2
5,198,990	+		Pf6N2E2_4465	0.22	-0.9
5,198,990	+		Pf6N2E2_4465	0.22	+1.0
5,198,991	-		Pf6N2E2_4465	0.22	+0.4
5,199,056	+		Pf6N2E2_4465	0.31	+0.2
5,199,056	+		Pf6N2E2_4465	0.31	-0.2
5,199,072	-		Pf6N2E2_4465	0.34	-0.2
5,199,072	-		Pf6N2E2_4465	0.34	-1.5
5,199,297	+		Pf6N2E2_4465	0.67	+0.7
5,199,297	+		Pf6N2E2_4465	0.67	-0.1
5,199,321	-		Pf6N2E2_4465	0.71	-0.8
5,199,321	-		Pf6N2E2_4465	0.71	+1.3
5,199,321	-		Pf6N2E2_4465	0.71	-0.4
5,199,398	+		Pf6N2E2_4465	0.83	-0.7
5,199,398	+		Pf6N2E2_4465	0.83	+0.6
5,199,398	+		Pf6N2E2_4465	0.83	+1.9
5,199,399	-		Pf6N2E2_4465	0.83	-0.1
5,199,399	-		Pf6N2E2_4465	0.83	+0.6
5,199,399	-		Pf6N2E2_4465	0.83	+0.5
5,199,399	-				-0.1
5,199,399	-		Pf6N2E2_4465	0.83	+0.7
5,199,476	-				-2.5
5,199,624	-				-0.6
5,199,624	-				-1.5
5,199,624	-				-0.7
5,199,624	-				+2.9
5,199,624	-				+1.0
5,199,755	+		Pf6N2E2_4466	0.20	+0.7
5,199,755	+		Pf6N2E2_4466	0.20	+0.7
5,199,824	+		Pf6N2E2_4466	0.25	+0.0
5,199,825	-		Pf6N2E2_4466	0.25	-0.7
5,199,825	-		Pf6N2E2_4466	0.25	-0.5
5,199,825	-		Pf6N2E2_4466	0.25	+1.9
5,199,947	+		Pf6N2E2_4466	0.34	-1.5
5,199,948	-		Pf6N2E2_4466	0.34	+0.3
5,199,957	-		Pf6N2E2_4466	0.35	+1.2
5,199,957	-		Pf6N2E2_4466	0.35	+0.0
5,200,005	-		Pf6N2E2_4466	0.38	+0.1
5,200,071	-		Pf6N2E2_4466	0.43	+0.4
5,200,097	+		Pf6N2E2_4466	0.45	-0.1
5,200,098	-		Pf6N2E2_4466	0.45	-0.4
5,200,098	-		Pf6N2E2_4466	0.45	+0.7
5,200,098	-		Pf6N2E2_4466	0.45	-0.2
5,200,172	+		Pf6N2E2_4466	0.51	-0.9
5,200,173	-		Pf6N2E2_4466	0.51	-1.2
5,200,253	-		Pf6N2E2_4466	0.57	+2.3
5,200,268	+		Pf6N2E2_4466	0.58	+1.3
5,200,268	+		Pf6N2E2_4466	0.58	+2.6
5,200,268	+		Pf6N2E2_4466	0.58	+1.6
5,200,268	+		Pf6N2E2_4466	0.58	-0.9
5,200,268	+		Pf6N2E2_4466	0.58	+0.6
5,200,269	-		Pf6N2E2_4466	0.58	-2.0
5,200,269	-		Pf6N2E2_4466	0.58	+0.1
5,200,269	-		Pf6N2E2_4466	0.58	-0.1
5,200,269	-		Pf6N2E2_4466	0.58	+1.0
5,200,269	-		Pf6N2E2_4466	0.58	+0.9
5,200,269	-		Pf6N2E2_4466	0.58	-0.2
5,200,309	+		Pf6N2E2_4466	0.61	+1.2
5,200,559	+		Pf6N2E2_4466	0.79	+0.1
5,200,560	-		Pf6N2E2_4466	0.79	-0.4
5,200,560	-		Pf6N2E2_4466	0.79	-2.1
5,200,560	-		Pf6N2E2_4466	0.79	-0.8
5,200,613	+		Pf6N2E2_4466	0.83	+0.2
5,200,661	+		Pf6N2E2_4466	0.87	-0.7
5,200,661	+		Pf6N2E2_4466	0.87	+0.3
5,200,661	+		Pf6N2E2_4466	0.87	+1.1
5,200,662	-		Pf6N2E2_4466	0.87	-0.5
5,200,680	-		Pf6N2E2_4466	0.88	-2.1
5,200,715	+				-0.6
5,200,715	+				-0.1
5,200,715	+				+0.0
5,200,715	+				+0.0
5,200,716	-				+0.4
5,200,716	-				+1.0
5,200,716	-				+0.5
5,200,716	-				-0.5
5,200,716	-				+1.3
5,200,718	+				+0.6
5,200,718	+				+0.1
5,200,719	-				-1.9
5,200,772	+				-2.0
5,200,783	+				+0.2
5,200,861	+				+0.6
5,200,862	-				+0.2
5,200,882	+				+0.3
5,200,882	+				+0.2
5,200,883	-				-0.7
5,200,902	+				-1.3
5,200,916	-				+0.6
5,200,916	-				+2.9
5,200,916	-				+1.3
5,200,922	+				+2.3
5,200,923	-				+0.2
5,200,954	+				-0.8
5,200,955	-				-2.2
5,200,975	+		Pf6N2E2_4467	0.19	+1.2
5,200,976	-		Pf6N2E2_4467	0.20	-0.4
5,200,993	+		Pf6N2E2_4467	0.34	-0.4
5,200,993	+		Pf6N2E2_4467	0.34	+0.3
5,200,994	-		Pf6N2E2_4467	0.35	-1.7
5,201,113	+				+2.0
5,201,120	+				+1.2
5,201,120	+				+0.3
5,201,120	+				+0.1
5,201,120	+				+1.3
5,201,120	+				+0.9
5,201,120	+				+1.1
5,201,120	+				+0.4
5,201,121	-				-0.6
5,201,121	-				+0.0
5,201,121	-				+0.6
5,201,121	-				+0.0
5,201,121	-				-0.2
5,201,259	-		Pf6N2E2_4468	0.14	-0.5
5,201,259	-		Pf6N2E2_4468	0.14	-0.1
5,201,591	+		Pf6N2E2_4468	0.70	+1.3
5,201,603	+		Pf6N2E2_4468	0.72	+0.2
5,201,603	+		Pf6N2E2_4468	0.72	-0.5
5,201,603	+		Pf6N2E2_4468	0.72	+0.2
5,201,603	+		Pf6N2E2_4468	0.72	-0.0
5,201,603	+		Pf6N2E2_4468	0.72	+0.5
5,201,603	+		Pf6N2E2_4468	0.72	-0.2
5,201,604	-		Pf6N2E2_4468	0.72	+0.2
5,201,604	-		Pf6N2E2_4468	0.72	+0.9
5,201,604	-		Pf6N2E2_4468	0.72	+1.1
5,201,604	-		Pf6N2E2_4468	0.72	+1.1
5,201,604	-		Pf6N2E2_4468	0.72	-0.6
5,201,604	-		Pf6N2E2_4468	0.72	+1.2
5,201,687	-		Pf6N2E2_4468	0.86	+1.7
5,201,687	-		Pf6N2E2_4468	0.86	+0.7
5,201,727	-				+1.9
5,201,727	-				+0.5
5,201,727	-				+0.1
5,201,765	+				-0.4
5,201,766	-				+0.8
5,201,778	+				+1.4