Experiment: m.b. benzoic 0.29 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1623 and HP15_1624 are separated by 30 nucleotides HP15_1624 and HP15_1625 are separated by 193 nucleotides HP15_1625 and HP15_1626 are separated by 167 nucleotides HP15_1626 and HP15_1627 are separated by 170 nucleotides HP15_1627 and HP15_1628 are separated by 251 nucleotides
HP15_1623: HP15_1623 - conserved hypothetical protein, at 1,720,662 to 1,723,118
_1623
HP15_1624: HP15_1624 - YebG, at 1,723,149 to 1,723,376
_1624
HP15_1625: HP15_1625 - 3-oxoacyl-(acyl carrier protein) synthase III, at 1,723,570 to 1,724,538
_1625
HP15_1626: HP15_1626 - conserved hypothetical protein, at 1,724,706 to 1,724,957
_1626
HP15_1627: HP15_1627 - conserved hypothetical protein, at 1,725,128 to 1,725,280
_1627
HP15_1628: HP15_1628 - peptidoglycan-binding domain 1 protein-like protein, at 1,725,532 to 1,726,653
_1628
Position (kb)
1723
1724
1725 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1722.589 kb on + strand, within HP15_1623 at 1722.589 kb on + strand, within HP15_1623 at 1722.597 kb on - strand, within HP15_1623 at 1722.606 kb on + strand, within HP15_1623 at 1722.758 kb on - strand, within HP15_1623 at 1722.834 kb on + strand, within HP15_1623 at 1722.890 kb on + strand at 1722.963 kb on + strand at 1722.963 kb on + strand at 1723.021 kb on - strand at 1723.076 kb on - strand at 1723.138 kb on + strand at 1723.202 kb on + strand, within HP15_1624 at 1723.309 kb on + strand, within HP15_1624 at 1723.376 kb on + strand at 1723.434 kb on + strand at 1723.584 kb on + strand at 1723.592 kb on - strand at 1723.664 kb on + strand at 1723.676 kb on - strand, within HP15_1625 at 1723.923 kb on - strand, within HP15_1625 at 1724.547 kb on - strand at 1724.563 kb on - strand at 1724.572 kb on + strand at 1724.576 kb on - strand at 1724.591 kb on + strand at 1724.647 kb on + strand at 1724.666 kb on + strand at 1724.671 kb on + strand at 1724.671 kb on + strand at 1724.671 kb on + strand at 1724.674 kb on - strand at 1724.674 kb on - strand at 1724.679 kb on - strand at 1724.906 kb on + strand, within HP15_1626 at 1724.914 kb on - strand, within HP15_1626 at 1724.936 kb on - strand at 1724.960 kb on - strand at 1725.010 kb on + strand at 1725.187 kb on + strand, within HP15_1627 at 1725.273 kb on - strand at 1725.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.29 mg/ml remove 1,722,589 + HP15_1623 0.78 -1.3 1,722,589 + HP15_1623 0.78 +0.1 1,722,597 - HP15_1623 0.79 -1.4 1,722,606 + HP15_1623 0.79 -0.3 1,722,758 - HP15_1623 0.85 -0.6 1,722,834 + HP15_1623 0.88 +1.0 1,722,890 + +0.6 1,722,963 + -0.2 1,722,963 + +1.1 1,723,021 - +0.2 1,723,076 - -0.4 1,723,138 + +0.5 1,723,202 + HP15_1624 0.23 -0.4 1,723,309 + HP15_1624 0.70 -0.4 1,723,376 + +0.0 1,723,434 + -0.7 1,723,584 + -0.2 1,723,592 - -1.3 1,723,664 + -1.6 1,723,676 - HP15_1625 0.11 -1.9 1,723,923 - HP15_1625 0.36 -1.7 1,724,547 - -0.4 1,724,563 - -1.6 1,724,572 + -1.0 1,724,576 - -1.8 1,724,591 + -3.0 1,724,647 + +0.3 1,724,666 + +0.8 1,724,671 + +0.0 1,724,671 + -0.4 1,724,671 + +0.2 1,724,674 - -0.5 1,724,674 - +0.4 1,724,679 - +0.8 1,724,906 + HP15_1626 0.79 +1.3 1,724,914 - HP15_1626 0.83 +0.7 1,724,936 - +0.0 1,724,960 - -0.3 1,725,010 + +0.3 1,725,187 + HP15_1627 0.39 +0.3 1,725,273 - -0.2 1,725,473 + -0.3
Or see this region's nucleotide sequence