Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03803

Experiment: PYE_noCalcium 30C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep3 12 days
3,967,758	-		CCNA_03802	0.60	-0.2
3,967,765	+		CCNA_03802	0.60	+0.2
3,967,765	+		CCNA_03802	0.60	+0.5
3,967,795	+		CCNA_03802	0.61	+0.2
3,967,803	-		CCNA_03802	0.62	+0.7
3,967,805	+		CCNA_03802	0.62	-0.2
3,967,805	+		CCNA_03802	0.62	-0.2
3,967,805	+		CCNA_03802	0.62	-0.1
3,967,805	+		CCNA_03802	0.62	+1.4
3,967,805	+		CCNA_03802	0.62	+0.9
3,967,805	+		CCNA_03802	0.62	-0.4
3,967,813	-		CCNA_03802	0.62	+1.4
3,967,813	-		CCNA_03802	0.62	-1.2
3,967,813	-		CCNA_03802	0.62	-1.0
3,967,813	-		CCNA_03802	0.62	-1.3
3,967,813	-		CCNA_03802	0.62	+0.2
3,967,826	+		CCNA_03802	0.63	-0.2
3,967,848	+		CCNA_03802	0.64	+0.7
3,967,864	-		CCNA_03802	0.65	-1.7
3,967,870	+		CCNA_03802	0.65	+0.5
3,967,870	+		CCNA_03802	0.65	+0.8
3,967,870	+		CCNA_03802	0.65	+0.3
3,967,878	-		CCNA_03802	0.65	-1.2
3,967,879	+		CCNA_03802	0.65	-1.0
3,967,907	+		CCNA_03802	0.67	+0.5
3,967,910	-		CCNA_03802	0.67	-0.5
3,967,915	-		CCNA_03802	0.67	+1.2
3,967,915	-		CCNA_03802	0.67	+0.7
3,967,915	-		CCNA_03802	0.67	+0.0
3,967,915	-		CCNA_03802	0.67	+1.2
3,967,941	+		CCNA_03802	0.68	+0.7
3,967,949	-		CCNA_03802	0.69	-1.5
3,967,954	-		CCNA_03802	0.69	+0.1
3,967,954	-		CCNA_03802	0.69	+0.2
3,967,954	-		CCNA_03802	0.69	-0.6
3,967,982	-		CCNA_03802	0.70	+0.4
3,968,009	+		CCNA_03802	0.71	-1.4
3,968,017	-		CCNA_03802	0.72	-1.5
3,968,017	-		CCNA_03802	0.72	-2.3
3,968,076	+		CCNA_03802	0.74	+0.1
3,968,084	-		CCNA_03802	0.75	-0.2
3,968,092	+		CCNA_03802	0.75	+0.3
3,968,092	+		CCNA_03802	0.75	-1.1
3,968,092	+		CCNA_03802	0.75	-1.2
3,968,100	-		CCNA_03802	0.76	+0.0
3,968,115	+		CCNA_03802	0.76	+0.1
3,968,126	+		CCNA_03802	0.77	-0.8
3,968,145	+		CCNA_03802	0.78	-0.8
3,968,153	-		CCNA_03802	0.78	+2.1
3,968,162	+		CCNA_03802	0.78	+0.8
3,968,211	+		CCNA_03802	0.81	+0.3
3,968,226	+		CCNA_03802	0.81	+0.1
3,968,227	+		CCNA_03802	0.81	-2.0
3,968,244	+		CCNA_03802	0.82	-0.4
3,968,249	+		CCNA_03802	0.82	+0.1
3,968,249	+		CCNA_03802	0.82	+0.6
3,968,257	-		CCNA_03802	0.83	-1.9
3,968,298	+		CCNA_03802	0.85	-0.6
3,968,303	+		CCNA_03802	0.85	-0.9
3,968,317	+		CCNA_03802	0.86	-0.0
3,968,321	-		CCNA_03802	0.86	+0.4
3,968,386	-		CCNA_03802	0.89	-0.2
3,968,396	+		CCNA_03802	0.89	+0.5
3,968,416	+				+0.4
3,968,416	+				-0.1
3,968,416	+				-0.9
3,968,424	+				+0.9
3,968,424	-				-1.3
3,968,424	-				-0.1
3,968,475	+				+0.1
3,968,499	+				+0.3
3,968,504	+				-0.1
3,968,507	-				-0.8
3,968,509	+				+0.7
3,968,512	-				-1.2
3,968,514	+				+0.2
3,968,549	+				+0.1
3,968,564	+				+0.6
3,968,564	+				+0.1
3,968,626	+				+1.2
3,968,646	+				+0.2
3,968,646	+				+1.4
3,968,646	+				+0.3
3,968,646	+				-0.5
3,968,646	+				-0.5
3,968,646	+				+0.5
3,968,646	+				-0.3
3,968,646	+				-0.1
3,968,646	+				+1.4
3,968,646	+				+0.4
3,968,646	+				-1.3
3,968,646	+				-0.3
3,968,646	+				-0.3
3,968,646	+				-0.2
3,968,654	-				+1.4
3,968,654	-				-2.1
3,968,654	-				+0.8
3,968,654	-				-1.0
3,968,654	-				+0.7
3,968,654	-				-1.7
3,968,654	-				-0.0
3,968,654	-				+0.8
3,968,654	-				+0.4
3,968,654	-				-1.0
3,968,654	-				-0.2
3,968,654	-				+0.6
3,968,656	-				-0.4
3,968,666	+				-0.4
3,968,666	+				-0.4
3,968,674	-				-0.1
3,968,674	-				-0.1
3,968,698	+				-1.0
3,968,706	-				+0.4
3,968,719	+				-0.5
3,968,755	+				+0.5
3,968,820	+				-0.6
3,968,831	+				+0.0
3,968,863	+				-0.5
3,968,867	+		CCNA_03803	0.10	+0.4
3,968,875	-		CCNA_03803	0.11	-0.0
3,968,903	-		CCNA_03803	0.13	-0.5
3,968,913	+		CCNA_03803	0.14	+0.6
3,968,913	+		CCNA_03803	0.14	-0.8
3,968,913	+		CCNA_03803	0.14	+0.4
3,968,986	-		CCNA_03803	0.21	+0.8
3,968,986	-		CCNA_03803	0.21	-1.0
3,968,988	+		CCNA_03803	0.21	-0.5
3,968,990	-		CCNA_03803	0.21	-0.6
3,968,992	-		CCNA_03803	0.22	-0.9
3,969,004	+		CCNA_03803	0.23	-0.4
3,969,020	+		CCNA_03803	0.24	-1.5
3,969,024	+		CCNA_03803	0.24	+0.1
3,969,025	+		CCNA_03803	0.25	+0.2
3,969,025	+		CCNA_03803	0.25	-0.9
3,969,033	-		CCNA_03803	0.25	-1.0
3,969,088	+		CCNA_03803	0.30	+0.3
3,969,142	-		CCNA_03803	0.35	+0.8
3,969,167	-		CCNA_03803	0.38	-0.2
3,969,207	+		CCNA_03803	0.41	+0.8
3,969,207	+		CCNA_03803	0.41	-0.6
3,969,207	+		CCNA_03803	0.41	+0.6
3,969,207	+		CCNA_03803	0.41	+0.5
3,969,215	-		CCNA_03803	0.42	-1.3
3,969,263	-		CCNA_03803	0.47	+0.1
3,969,277	+		CCNA_03803	0.48	+0.7
3,969,378	+		CCNA_03803	0.57	+0.2
3,969,378	+		CCNA_03803	0.57	-2.1
3,969,378	+				-0.2
3,969,378	+		CCNA_03803	0.57	+0.0
3,969,378	+		CCNA_03803	0.57	-0.7
3,969,378	+		CCNA_03803	0.57	-0.5
3,969,386	-		CCNA_03803	0.58	-2.1
3,969,386	-		CCNA_03803	0.58	+1.4
3,969,386	-		CCNA_03803	0.58	+0.4
3,969,402	+		CCNA_03803	0.59	+0.1
3,969,450	+		CCNA_03803	0.64	-0.5
3,969,450	+		CCNA_03803	0.64	-0.3
3,969,450	+		CCNA_03803	0.64	-0.4
3,969,458	-		CCNA_03803	0.64	-0.2
3,969,458	-		CCNA_03803	0.64	+0.8
3,969,458	-		CCNA_03803	0.64	-0.9
3,969,491	+		CCNA_03803	0.67	-0.4
3,969,517	+		CCNA_03803	0.70	-0.1
3,969,517	+		CCNA_03803	0.70	+0.6
3,969,517	+		CCNA_03803	0.70	+0.9
3,969,517	+		CCNA_03803	0.70	+0.1
3,969,525	-		CCNA_03803	0.71	+3.4
3,969,558	-		CCNA_03803	0.74	+0.8
3,969,579	+		CCNA_03803	0.76	+0.4
3,969,579	+		CCNA_03803	0.76	+0.3
3,969,579	+		CCNA_03803	0.76	-0.3
3,969,597	-		CCNA_03803	0.77	-0.0
3,969,607	-		CCNA_03803	0.78	-0.4
3,969,613	+		CCNA_03803	0.79	-0.5
3,969,666	+		CCNA_03803	0.84	+0.3
3,969,673	+		CCNA_03803	0.84	+0.7
3,969,688	+		CCNA_03803	0.86	+0.7
3,969,688	+		CCNA_03803	0.86	+0.7
3,969,747	-				+0.2
3,969,747	-				+1.4
3,969,772	-				+0.8
3,969,774	+				+0.0
3,969,791	-				+0.2
3,969,793	+				-0.8
3,969,803	-				-1.5
3,969,837	+				-0.1
3,969,837	+				+0.4
3,969,845	-				+0.6
3,969,845	-				+0.8
3,969,906	+				+0.6
3,970,009	+		CCNA_03804	0.16	+1.0
3,970,009	+		CCNA_03804	0.16	+1.2
3,970,032	+		CCNA_03804	0.23	-2.2
3,970,042	+		CCNA_03804	0.26	-1.1
3,970,085	-				+1.4
3,970,085	-		CCNA_03804	0.39	-0.0
3,970,085	-		CCNA_03804	0.39	+0.0
3,970,085	-		CCNA_03804	0.39	-0.1
3,970,085	-		CCNA_03804	0.39	+1.4
3,970,121	-		CCNA_03804	0.50	-0.0
3,970,166	-		CCNA_03804	0.63	+0.6
3,970,167	+		CCNA_03804	0.64	+0.1
3,970,172	+		CCNA_03804	0.65	+0.4
3,970,172	+		CCNA_03804	0.65	+0.8
3,970,172	+		CCNA_03804	0.65	+0.3
3,970,180	-		CCNA_03804	0.68	-0.4
3,970,180	-		CCNA_03804	0.68	+0.7
3,970,180	-		CCNA_03804	0.68	+0.6
3,970,191	+		CCNA_03804	0.71	+0.7
3,970,208	+		CCNA_03804	0.76	+0.4
3,970,254	+				-1.7
3,970,254	+				-1.4
3,970,254	+				-0.4
3,970,294	-				-2.9
3,970,321	-		CCNA_03805	0.11	-1.2
3,970,328	-		CCNA_03805	0.12	-0.8
3,970,328	-		CCNA_03805	0.12	+0.7
3,970,367	-		CCNA_03805	0.19	-1.1
3,970,367	-		CCNA_03805	0.19	-1.1
3,970,369	-		CCNA_03805	0.20	-2.1
3,970,388	-		CCNA_03805	0.23	-0.4
3,970,417	-		CCNA_03805	0.28	-2.3
3,970,417	-		CCNA_03805	0.28	-1.8
3,970,417	-		CCNA_03805	0.28	-2.4
3,970,439	-		CCNA_03805	0.32	-1.8
3,970,441	-		CCNA_03805	0.32	-3.4
3,970,464	-		CCNA_03805	0.36	-2.8
3,970,483	-		CCNA_03805	0.39	-1.3
3,970,505	-		CCNA_03805	0.43	-2.0
3,970,505	-		CCNA_03805	0.43	-1.1
3,970,544	-		CCNA_03805	0.50	-2.1
3,970,544	-		CCNA_03805	0.50	-1.5
3,970,567	-		CCNA_03805	0.54	-3.5
3,970,572	-		CCNA_03805	0.55	-0.5
3,970,572	-		CCNA_03805	0.55	-1.0
3,970,631	-		CCNA_03805	0.65	-1.7
3,970,690	-		CCNA_03805	0.75	-0.7
3,970,690	-		CCNA_03805	0.75	-0.8
3,970,737	+		CCNA_03805	0.83	-0.4
3,970,745	-		CCNA_03805	0.84	+0.3