Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02716

Experiment: PYE_noCalcium 30C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep3 12 days
2,876,409	+		CCNA_02715	0.58	+0.3
2,876,418	+		CCNA_02715	0.59	-0.6
2,876,418	+		CCNA_02715	0.59	+1.6
2,876,418	+		CCNA_02715	0.59	+0.3
2,876,431	+		CCNA_02715	0.59	-1.2
2,876,438	+		CCNA_02715	0.60	-0.6
2,876,439	-		CCNA_02715	0.60	-2.1
2,876,439	-		CCNA_02715	0.60	-1.4
2,876,458	-		CCNA_02715	0.61	+1.0
2,876,470	+		CCNA_02715	0.61	-2.1
2,876,513	+		CCNA_02715	0.63	-0.2
2,876,533	-		CCNA_02715	0.64	+2.6
2,876,597	+		CCNA_02715	0.67	-1.0
2,876,597	+		CCNA_02715	0.67	-3.1
2,876,605	-		CCNA_02715	0.68	+2.6
2,876,609	-		CCNA_02715	0.68	+1.6
2,876,619	-		CCNA_02715	0.68	+2.6
2,876,641	-		CCNA_02715	0.69	+0.0
2,876,668	-		CCNA_02715	0.71	-1.1
2,876,732	-		CCNA_02715	0.74	-0.7
2,876,732	-		CCNA_02715	0.74	+1.6
2,876,748	-		CCNA_02715	0.75	-1.4
2,876,755	-		CCNA_02715	0.75	+2.6
2,876,777	+		CCNA_02715	0.76	-1.9
2,876,785	+		CCNA_02715	0.76	-2.2
2,876,821	+		CCNA_02715	0.78	-2.8
2,876,822	-		CCNA_02715	0.78	+0.3
2,876,893	+		CCNA_02715	0.82	-2.2
2,876,912	-		CCNA_02715	0.82	-1.2
2,876,924	+		CCNA_02715	0.83	+1.6
2,876,939	+		CCNA_02715	0.84	+1.0
2,876,939	+		CCNA_02715	0.84	-0.2
2,876,947	-		CCNA_02715	0.84	-1.0
2,876,947	-		CCNA_02715	0.84	-1.7
2,876,947	-		CCNA_02715	0.84	+0.6
2,876,952	-		CCNA_02715	0.84	+0.3
2,876,953	+		CCNA_02715	0.84	-1.3
2,876,961	-		CCNA_02715	0.85	+0.3
2,876,992	+		CCNA_02715	0.86	+0.6
2,877,060	-		CCNA_02715	0.90	-1.3
2,877,113	+				-3.0
2,877,155	+				-1.5
2,877,155	+				+1.6
2,877,158	+				-0.1
2,877,217	+				-3.0
2,877,308	+				+1.0
2,877,321	+				-0.3
2,877,321	+				-0.4
2,877,329	-				+2.4
2,877,329	-				+1.0
2,877,329	-				-0.4
2,877,329	-				+1.0
2,877,342	+				-0.6
2,877,342	+				-1.3
2,877,342	+				+0.3
2,877,342	+				-0.4
2,877,342	+				-0.6
2,877,342	+				+1.6
2,877,342	+				+0.5
2,877,350	-				+0.6
2,877,350	-				+0.9
2,877,379	+				-0.6
2,877,471	-		CCNA_02716	0.10	+0.3
2,877,529	-		CCNA_02716	0.16	-0.2
2,877,534	+		CCNA_02716	0.16	-0.5
2,877,534	+		CCNA_02716	0.16	-1.0
2,877,534	+		CCNA_02716	0.16	-1.4
2,877,542	-		CCNA_02716	0.17	-0.4
2,877,542	-		CCNA_02716	0.17	+0.8
2,877,554	+		CCNA_02716	0.18	+0.3
2,877,571	+		CCNA_02716	0.20	-0.7
2,877,576	+		CCNA_02716	0.20	+1.6
2,877,584	-		CCNA_02716	0.21	+2.0
2,877,644	+		CCNA_02716	0.27	+0.1
2,877,690	+		CCNA_02716	0.32	-0.7
2,877,690	+		CCNA_02716	0.32	-0.6
2,877,690	+		CCNA_02716	0.32	-0.9
2,877,690	+		CCNA_02716	0.32	-1.4
2,877,690	+		CCNA_02716	0.32	+1.0
2,877,690	+		CCNA_02716	0.32	-0.2
2,877,693	-		CCNA_02716	0.32	-0.6
2,877,698	-		CCNA_02716	0.33	+0.7
2,877,698	-		CCNA_02716	0.33	+1.6
2,877,698	-		CCNA_02716	0.33	-0.7
2,877,699	-		CCNA_02716	0.33	+0.3
2,877,730	+		CCNA_02716	0.36	+0.2
2,877,733	-		CCNA_02716	0.36	+0.4
2,877,748	+		CCNA_02716	0.38	-0.0
2,877,751	-		CCNA_02716	0.38	-0.7
2,877,756	-		CCNA_02716	0.38	+0.3
2,877,774	+		CCNA_02716	0.40	-0.1
2,877,902	-		CCNA_02716	0.53	-0.2
2,877,923	-		CCNA_02716	0.55	-0.9
2,877,924	+		CCNA_02716	0.55	+0.2
2,877,924	+		CCNA_02716	0.55	-0.1
2,877,932	-		CCNA_02716	0.56	-0.1
2,877,932	-		CCNA_02716	0.56	+1.9
2,877,932	-		CCNA_02716	0.56	+0.6
2,877,932	-		CCNA_02716	0.56	-2.2
2,877,992	-		CCNA_02716	0.62	+1.0
2,878,011	+		CCNA_02716	0.64	-0.0
2,878,033	+		CCNA_02716	0.66	+0.6
2,878,056	+		CCNA_02716	0.68	-0.8
2,878,069	+		CCNA_02716	0.70	-0.6
2,878,077	-		CCNA_02716	0.70	+0.3
2,878,099	+		CCNA_02716	0.73	+0.4
2,878,113	+		CCNA_02716	0.74	-1.2
2,878,125	+		CCNA_02716	0.75	-0.9
2,878,125	+		CCNA_02716	0.75	+0.1
2,878,125	+		CCNA_02716	0.75	-0.6
2,878,150	-		CCNA_02716	0.78	+0.7
2,878,172	+		CCNA_02716	0.80	-0.4
2,878,284	+				-0.9
2,878,303	-				+0.0
2,878,308	+				+0.5
2,878,308	+				+0.2
2,878,329	-				-1.1
2,878,338	+				+0.1
2,878,338	+				+0.9
2,878,339	+				-0.6
2,878,346	-				-1.5
2,878,346	-				-1.9
2,878,346	-				-0.6
2,878,346	-				-0.7
2,878,346	-				+2.0
2,878,346	-				+0.2
2,878,365	+				+0.5
2,878,367	-				-0.4
2,878,392	-				-0.7
2,878,429	+				-0.0
2,878,429	+				-0.7
2,878,429	+				-0.3
2,878,437	+				+0.0
2,878,437	-				+0.7
2,878,460	+		CCNA_02717	0.12	+0.3
2,878,476	+		CCNA_02717	0.14	-0.9
2,878,502	+		CCNA_02717	0.17	-0.4
2,878,502	+		CCNA_02717	0.17	-0.7
2,878,510	-		CCNA_02717	0.19	+0.3
2,878,517	-		CCNA_02717	0.19	-0.3
2,878,569	+		CCNA_02717	0.26	-0.4
2,878,574	+		CCNA_02717	0.27	+0.1
2,878,574	+		CCNA_02717	0.27	+0.1
2,878,574	+		CCNA_02717	0.27	+0.3
2,878,582	-		CCNA_02717	0.28	-0.7
2,878,583	-		CCNA_02717	0.28	-2.9
2,878,599	+		CCNA_02717	0.30	+0.8
2,878,654	-		CCNA_02717	0.38	-0.2
2,878,675	-		CCNA_02717	0.41	-1.0
2,878,706	+		CCNA_02717	0.45	-0.2
2,878,728	+		CCNA_02717	0.48	-0.7
2,878,728	+		CCNA_02717	0.48	+1.3
2,878,736	-		CCNA_02717	0.49	-0.5
2,878,759	-		CCNA_02717	0.52	-0.6
2,878,770	-		CCNA_02717	0.53	-0.7
2,878,804	+		CCNA_02717	0.58	-0.4
2,878,804	-		CCNA_02717	0.58	-1.2
2,878,850	-		CCNA_02717	0.64	-1.2
2,878,852	-		CCNA_02717	0.64	-0.8
2,878,868	+		CCNA_02717	0.66	-0.5
2,878,878	+		CCNA_02717	0.68	-2.8
2,878,878	+		CCNA_02717	0.68	-0.1
2,878,878	+		CCNA_02717	0.68	+1.3
2,878,883	+		CCNA_02717	0.68	-0.7
2,878,886	-		CCNA_02717	0.69	-1.2
2,878,886	-		CCNA_02717	0.69	-0.8
2,878,886	-		CCNA_02717	0.69	-0.1
2,878,922	-		CCNA_02717	0.73	-1.1
2,878,932	+		CCNA_02717	0.75	-0.6
2,878,932	+		CCNA_02717	0.75	+0.9
2,878,940	-		CCNA_02717	0.76	-1.4
2,878,961	+		CCNA_02717	0.79	-1.5
2,878,975	-		CCNA_02717	0.81	+1.0
2,879,012	-		CCNA_02717	0.85	+1.6
2,879,049	+				-0.0
2,879,108	-				-1.6
2,879,143	-				-0.6
2,879,166	+				-0.4
2,879,166	+				+1.0
2,879,171	+				-2.4
2,879,174	-				+0.7
2,879,179	-				+0.3
2,879,195	+		CCNA_02718	0.10	+0.1
2,879,236	-		CCNA_02718	0.16	+2.2
2,879,238	+		CCNA_02718	0.16	+0.1
2,879,246	-		CCNA_02718	0.17	+0.6
2,879,246	-		CCNA_02718	0.17	+0.1
2,879,271	-		CCNA_02718	0.20	-2.1
2,879,272	+		CCNA_02718	0.20	-0.9
2,879,273	+		CCNA_02718	0.21	-0.9
2,879,273	+		CCNA_02718	0.21	+0.7
2,879,273	+		CCNA_02718	0.21	-0.6
2,879,280	-		CCNA_02718	0.21	+0.1
2,879,280	-		CCNA_02718	0.21	+1.6
2,879,281	-		CCNA_02718	0.22	+0.7
2,879,281	-		CCNA_02718	0.22	-0.2
2,879,282	+		CCNA_02718	0.22	-1.4
2,879,282	+		CCNA_02718	0.22	-1.4
2,879,285	-		CCNA_02718	0.22	+0.9
2,879,316	-		CCNA_02718	0.26	+0.6
2,879,342	+		CCNA_02718	0.30	+0.2
2,879,361	-		CCNA_02718	0.32	+0.0