Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10670 and BWI76_RS10675 are separated by 308 nucleotides BWI76_RS10675 and BWI76_RS10680 are separated by 32 nucleotides
BWI76_RS10670: BWI76_RS10670 - PTS fructose transporter subunit IIC, at 2,252,753 to 2,253,829
_RS10670
BWI76_RS10675: BWI76_RS10675 - phosphoenolpyruvate--protein phosphotransferase, at 2,254,138 to 2,256,639
_RS10675
BWI76_RS10680: BWI76_RS10680 - tartrate dehydrogenase, at 2,256,672 to 2,257,790
_RS10680
Position (kb)
2254
2255
2256
2257 Strain fitness (log2 ratio)
-1
0
1
2 at 2253.276 kb on + strand, within BWI76_RS10670 at 2253.676 kb on + strand, within BWI76_RS10670 at 2253.783 kb on - strand at 2254.178 kb on + strand at 2254.365 kb on - strand at 2254.570 kb on - strand, within BWI76_RS10675 at 2254.815 kb on - strand, within BWI76_RS10675 at 2255.217 kb on + strand, within BWI76_RS10675 at 2255.566 kb on + strand, within BWI76_RS10675 at 2255.574 kb on - strand, within BWI76_RS10675 at 2255.908 kb on - strand, within BWI76_RS10675 at 2256.226 kb on - strand, within BWI76_RS10675 at 2256.245 kb on + strand, within BWI76_RS10675 at 2256.245 kb on + strand, within BWI76_RS10675 at 2256.253 kb on - strand, within BWI76_RS10675 at 2256.299 kb on + strand, within BWI76_RS10675 at 2256.634 kb on - strand at 2257.058 kb on + strand, within BWI76_RS10680 at 2257.097 kb on + strand, within BWI76_RS10680
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 2,253,276 + BWI76_RS10670 0.49 -0.5 2,253,676 + BWI76_RS10670 0.86 -0.2 2,253,783 - +0.9 2,254,178 + -0.6 2,254,365 - -1.1 2,254,570 - BWI76_RS10675 0.17 +0.1 2,254,815 - BWI76_RS10675 0.27 -0.1 2,255,217 + BWI76_RS10675 0.43 +0.3 2,255,566 + BWI76_RS10675 0.57 -0.5 2,255,574 - BWI76_RS10675 0.57 +0.7 2,255,908 - BWI76_RS10675 0.71 +0.9 2,256,226 - BWI76_RS10675 0.83 +0.6 2,256,245 + BWI76_RS10675 0.84 +0.3 2,256,245 + BWI76_RS10675 0.84 +1.0 2,256,253 - BWI76_RS10675 0.85 +0.8 2,256,299 + BWI76_RS10675 0.86 +0.4 2,256,634 - +1.9 2,257,058 + BWI76_RS10680 0.34 +0.5 2,257,097 + BWI76_RS10680 0.38 +1.6
Or see this region's nucleotide sequence