Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09460 and BWI76_RS09465 are separated by 57 nucleotides BWI76_RS09465 and BWI76_RS09470 are separated by 10 nucleotides BWI76_RS09470 and BWI76_RS09475 overlap by 4 nucleotides
BWI76_RS09460: BWI76_RS09460 - spermidine/putrescine ABC transporter substrate-binding protein PotF, at 1,980,576 to 1,981,688
_RS09460
BWI76_RS09465: BWI76_RS09465 - polyamine ABC transporter ATP-binding protein, at 1,981,746 to 1,982,924
_RS09465
BWI76_RS09470: BWI76_RS09470 - putrescine ABC transporter permease, at 1,982,935 to 1,983,888
_RS09470
BWI76_RS09475: BWI76_RS09475 - putrescine ABC transporter permease PotI, at 1,983,885 to 1,984,730
_RS09475
Position (kb)
1981
1982
1983 Strain fitness (log2 ratio)
-1
0
1
2 at 1980.790 kb on - strand, within BWI76_RS09460 at 1980.816 kb on - strand, within BWI76_RS09460 at 1980.864 kb on - strand, within BWI76_RS09460 at 1981.028 kb on + strand, within BWI76_RS09460 at 1981.036 kb on - strand, within BWI76_RS09460 at 1981.504 kb on - strand, within BWI76_RS09460 at 1982.027 kb on - strand, within BWI76_RS09465 at 1982.245 kb on - strand, within BWI76_RS09465 at 1982.359 kb on - strand, within BWI76_RS09465 at 1982.535 kb on - strand, within BWI76_RS09465 at 1982.595 kb on + strand, within BWI76_RS09465 at 1982.603 kb on - strand, within BWI76_RS09465 at 1982.603 kb on - strand, within BWI76_RS09465 at 1982.613 kb on - strand, within BWI76_RS09465 at 1982.724 kb on + strand at 1982.869 kb on - strand at 1983.548 kb on - strand, within BWI76_RS09470 at 1983.640 kb on - strand, within BWI76_RS09470 at 1983.739 kb on + strand, within BWI76_RS09470 at 1983.802 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 1,980,790 - BWI76_RS09460 0.19 -0.6 1,980,816 - BWI76_RS09460 0.22 +0.0 1,980,864 - BWI76_RS09460 0.26 -0.1 1,981,028 + BWI76_RS09460 0.41 +0.7 1,981,036 - BWI76_RS09460 0.41 +2.2 1,981,504 - BWI76_RS09460 0.83 +0.6 1,982,027 - BWI76_RS09465 0.24 +0.2 1,982,245 - BWI76_RS09465 0.42 -1.1 1,982,359 - BWI76_RS09465 0.52 +0.3 1,982,535 - BWI76_RS09465 0.67 +0.5 1,982,595 + BWI76_RS09465 0.72 +1.8 1,982,603 - BWI76_RS09465 0.73 +2.3 1,982,603 - BWI76_RS09465 0.73 +0.4 1,982,613 - BWI76_RS09465 0.74 +0.4 1,982,724 + +0.2 1,982,869 - +2.4 1,983,548 - BWI76_RS09470 0.64 +0.3 1,983,640 - BWI76_RS09470 0.74 -1.0 1,983,739 + BWI76_RS09470 0.84 -0.3 1,983,802 - -1.1
Or see this region's nucleotide sequence