Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08450 and BWI76_RS08455 are separated by 11 nucleotides BWI76_RS08455 and BWI76_RS08460 are separated by 74 nucleotides
BWI76_RS08450: BWI76_RS08450 - fumarate hydratase, at 1,788,434 to 1,790,086
_RS08450
BWI76_RS08455: BWI76_RS08455 - glutaminase, at 1,790,098 to 1,791,099
_RS08455
BWI76_RS08460: BWI76_RS08460 - dicarboxylate/amino acid:cation symporter, at 1,791,174 to 1,792,481
_RS08460
Position (kb)
1790
1791
1792 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1789.139 kb on + strand, within BWI76_RS08450 at 1789.254 kb on + strand at 1789.254 kb on + strand, within BWI76_RS08450 at 1789.496 kb on - strand, within BWI76_RS08450 at 1789.680 kb on + strand, within BWI76_RS08450 at 1790.600 kb on + strand, within BWI76_RS08455 at 1790.609 kb on - strand, within BWI76_RS08455 at 1790.811 kb on + strand, within BWI76_RS08455 at 1790.930 kb on - strand, within BWI76_RS08455 at 1790.942 kb on + strand, within BWI76_RS08455 at 1791.044 kb on + strand at 1791.141 kb on - strand at 1791.150 kb on - strand at 1791.208 kb on + strand at 1791.514 kb on + strand, within BWI76_RS08460 at 1791.572 kb on + strand, within BWI76_RS08460 at 1791.572 kb on + strand, within BWI76_RS08460 at 1791.580 kb on - strand, within BWI76_RS08460 at 1791.730 kb on - strand at 1791.947 kb on + strand, within BWI76_RS08460 at 1791.947 kb on + strand, within BWI76_RS08460 at 1791.959 kb on + strand, within BWI76_RS08460 at 1792.049 kb on + strand, within BWI76_RS08460 at 1792.077 kb on + strand, within BWI76_RS08460 at 1792.099 kb on - strand, within BWI76_RS08460
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 1,789,139 + BWI76_RS08450 0.43 -0.9 1,789,254 + +4.0 1,789,254 + BWI76_RS08450 0.50 -0.7 1,789,496 - BWI76_RS08450 0.64 -1.5 1,789,680 + BWI76_RS08450 0.75 -1.8 1,790,600 + BWI76_RS08455 0.50 +0.3 1,790,609 - BWI76_RS08455 0.51 +0.4 1,790,811 + BWI76_RS08455 0.71 -0.3 1,790,930 - BWI76_RS08455 0.83 +0.6 1,790,942 + BWI76_RS08455 0.84 +1.5 1,791,044 + +0.0 1,791,141 - +1.0 1,791,150 - +0.3 1,791,208 + -0.2 1,791,514 + BWI76_RS08460 0.26 -0.5 1,791,572 + BWI76_RS08460 0.30 -0.5 1,791,572 + BWI76_RS08460 0.30 +0.6 1,791,580 - BWI76_RS08460 0.31 +0.4 1,791,730 - +0.8 1,791,947 + BWI76_RS08460 0.59 +0.5 1,791,947 + BWI76_RS08460 0.59 -0.4 1,791,959 + BWI76_RS08460 0.60 +0.4 1,792,049 + BWI76_RS08460 0.67 +1.0 1,792,077 + BWI76_RS08460 0.69 -0.3 1,792,099 - BWI76_RS08460 0.71 -0.1
Or see this region's nucleotide sequence