Experiment: 4 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2230 and DvMF_2231 are separated by 155 nucleotides DvMF_2231 and DvMF_2232 are separated by 102 nucleotides DvMF_2232 and DvMF_2233 are separated by 336 nucleotides
DvMF_2230: DvMF_2230 - hydrolase, TatD family (RefSeq), at 2,791,493 to 2,792,314
_2230
DvMF_2231: DvMF_2231 - protein of unknown function DUF309 (RefSeq), at 2,792,470 to 2,792,892
_2231
DvMF_2232: DvMF_2232 - carbon monoxide dehydrogenase accessory protein CooC, putative (RefSeq), at 2,792,995 to 2,793,846
_2232
DvMF_2233: DvMF_2233 - carbon-monoxide dehydrogenase, catalytic subunit (RefSeq), at 2,794,183 to 2,796,072
_2233
Position (kb)
2792
2793
2794 Strain fitness (log2 ratio)
-1
0
1
2 at 2792.309 kb on + strand at 2792.473 kb on - strand at 2792.598 kb on - strand, within DvMF_2231 at 2792.637 kb on + strand, within DvMF_2231 at 2792.823 kb on + strand, within DvMF_2231 at 2793.013 kb on - strand at 2793.108 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.291 kb on - strand, within DvMF_2232 at 2793.466 kb on - strand, within DvMF_2232 at 2793.565 kb on + strand, within DvMF_2232 at 2793.624 kb on + strand, within DvMF_2232 at 2793.708 kb on - strand, within DvMF_2232 at 2793.727 kb on - strand, within DvMF_2232 at 2793.975 kb on + strand at 2794.004 kb on + strand at 2794.023 kb on + strand at 2794.074 kb on - strand at 2794.446 kb on + strand, within DvMF_2233 at 2794.489 kb on - strand, within DvMF_2233
Per-strain Table
Position Strand Gene LocusTag Fraction 4 day starvation, 37C remove 2,792,309 + +0.4 2,792,473 - +0.2 2,792,598 - DvMF_2231 0.30 +0.0 2,792,637 + DvMF_2231 0.39 +0.1 2,792,823 + DvMF_2231 0.83 +0.2 2,793,013 - +0.2 2,793,108 + DvMF_2232 0.13 +0.4 2,793,276 + DvMF_2232 0.33 +0.6 2,793,276 + DvMF_2232 0.33 +2.3 2,793,276 + DvMF_2232 0.33 +0.6 2,793,284 - DvMF_2232 0.34 +0.7 2,793,284 - DvMF_2232 0.34 +0.2 2,793,284 - DvMF_2232 0.34 +0.5 2,793,284 - DvMF_2232 0.34 +0.6 2,793,284 - DvMF_2232 0.34 +0.6 2,793,284 - DvMF_2232 0.34 +1.7 2,793,284 - DvMF_2232 0.34 +0.6 2,793,291 - DvMF_2232 0.35 +0.7 2,793,466 - DvMF_2232 0.55 +0.7 2,793,565 + DvMF_2232 0.67 +1.5 2,793,624 + DvMF_2232 0.74 +1.3 2,793,708 - DvMF_2232 0.84 +0.4 2,793,727 - DvMF_2232 0.86 +0.1 2,793,975 + +0.8 2,794,004 + +0.4 2,794,023 + +0.9 2,794,074 - +0.9 2,794,446 + DvMF_2233 0.14 +2.4 2,794,489 - DvMF_2233 0.16 +0.5
Or see this region's nucleotide sequence