Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g62 and HP15_p187g63 are separated by 45 nucleotides HP15_p187g63 and HP15_p187g64 are separated by 9 nucleotides HP15_p187g64 and HP15_p187g65 are separated by 3 nucleotides HP15_p187g65 and HP15_p187g66 are separated by 68 nucleotides HP15_p187g66 and HP15_p187g67 overlap by 19 nucleotides
HP15_p187g62: HP15_p187g62 - acetyltransferase, at 56,945 to 57,928
_p187g62
HP15_p187g63: HP15_p187g63 - secreted protein, at 57,974 to 58,090
_p187g63
HP15_p187g64: HP15_p187g64 - hypothetical protein, at 58,100 to 58,204
_p187g64
HP15_p187g65: HP15_p187g65 - protein containing DUF218, at 58,208 to 58,687
_p187g65
HP15_p187g66: HP15_p187g66 - UDP-glucose 4-epimerase, at 58,756 to 59,787
_p187g66
HP15_p187g67: HP15_p187g67 - glycosyl transferase group 1 family protein, at 59,769 to 60,950
_p187g67
Position (kb) 58
59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 57.892 kb on + strand at 57.900 kb on + strand at 57.900 kb on + strand at 57.900 kb on + strand at 57.900 kb on + strand at 57.908 kb on - strand at 57.917 kb on + strand at 57.917 kb on + strand at 57.925 kb on - strand at 57.925 kb on - strand at 57.955 kb on + strand at 57.955 kb on + strand at 57.962 kb on - strand at 57.963 kb on - strand at 58.030 kb on - strand, within HP15_p187g63 at 58.030 kb on - strand, within HP15_p187g63 at 58.052 kb on + strand, within HP15_p187g63 at 58.086 kb on - strand at 58.104 kb on - strand at 58.121 kb on + strand, within HP15_p187g64 at 58.139 kb on + strand, within HP15_p187g64 at 58.139 kb on + strand, within HP15_p187g64 at 58.147 kb on - strand, within HP15_p187g64 at 58.147 kb on - strand, within HP15_p187g64 at 58.147 kb on - strand, within HP15_p187g64 at 58.193 kb on + strand, within HP15_p187g64 at 58.198 kb on + strand at 58.201 kb on - strand at 58.206 kb on - strand at 58.213 kb on - strand at 58.242 kb on - strand at 58.312 kb on - strand, within HP15_p187g65 at 58.339 kb on + strand, within HP15_p187g65 at 58.339 kb on + strand, within HP15_p187g65 at 58.351 kb on + strand, within HP15_p187g65 at 58.359 kb on - strand, within HP15_p187g65 at 58.359 kb on - strand, within HP15_p187g65 at 58.399 kb on + strand, within HP15_p187g65 at 58.399 kb on + strand, within HP15_p187g65 at 58.407 kb on - strand, within HP15_p187g65 at 58.407 kb on - strand, within HP15_p187g65 at 58.409 kb on - strand, within HP15_p187g65 at 58.425 kb on + strand, within HP15_p187g65 at 58.449 kb on + strand, within HP15_p187g65 at 58.455 kb on - strand, within HP15_p187g65 at 58.477 kb on - strand, within HP15_p187g65 at 58.498 kb on - strand, within HP15_p187g65 at 58.529 kb on + strand, within HP15_p187g65 at 58.541 kb on + strand, within HP15_p187g65 at 58.556 kb on - strand, within HP15_p187g65 at 58.562 kb on - strand, within HP15_p187g65 at 58.572 kb on - strand, within HP15_p187g65 at 58.583 kb on + strand, within HP15_p187g65 at 58.583 kb on - strand, within HP15_p187g65 at 58.604 kb on - strand, within HP15_p187g65 at 58.607 kb on + strand, within HP15_p187g65 at 58.616 kb on + strand, within HP15_p187g65 at 58.623 kb on + strand, within HP15_p187g65 at 58.624 kb on - strand, within HP15_p187g65 at 58.624 kb on - strand, within HP15_p187g65 at 58.628 kb on + strand, within HP15_p187g65 at 58.633 kb on + strand, within HP15_p187g65 at 58.641 kb on - strand at 58.813 kb on + strand at 58.853 kb on + strand at 58.888 kb on - strand, within HP15_p187g66 at 58.924 kb on + strand, within HP15_p187g66 at 58.945 kb on + strand, within HP15_p187g66 at 58.960 kb on - strand, within HP15_p187g66 at 58.961 kb on + strand, within HP15_p187g66 at 58.961 kb on + strand, within HP15_p187g66 at 58.969 kb on - strand, within HP15_p187g66 at 58.980 kb on + strand, within HP15_p187g66 at 58.983 kb on + strand, within HP15_p187g66 at 58.986 kb on + strand, within HP15_p187g66 at 58.986 kb on + strand, within HP15_p187g66 at 58.993 kb on - strand, within HP15_p187g66 at 59.021 kb on + strand, within HP15_p187g66 at 59.036 kb on - strand, within HP15_p187g66 at 59.038 kb on + strand, within HP15_p187g66 at 59.038 kb on + strand, within HP15_p187g66 at 59.046 kb on - strand, within HP15_p187g66 at 59.046 kb on - strand, within HP15_p187g66 at 59.051 kb on - strand, within HP15_p187g66 at 59.063 kb on - strand, within HP15_p187g66 at 59.073 kb on - strand, within HP15_p187g66 at 59.073 kb on - strand, within HP15_p187g66 at 59.087 kb on + strand, within HP15_p187g66 at 59.129 kb on - strand, within HP15_p187g66 at 59.172 kb on + strand, within HP15_p187g66 at 59.181 kb on - strand, within HP15_p187g66 at 59.188 kb on + strand, within HP15_p187g66 at 59.190 kb on + strand, within HP15_p187g66 at 59.195 kb on + strand, within HP15_p187g66 at 59.195 kb on + strand, within HP15_p187g66 at 59.212 kb on + strand, within HP15_p187g66 at 59.212 kb on + strand, within HP15_p187g66 at 59.310 kb on - strand, within HP15_p187g66 at 59.338 kb on - strand, within HP15_p187g66 at 59.395 kb on - strand, within HP15_p187g66 at 59.414 kb on + strand, within HP15_p187g66 at 59.414 kb on + strand, within HP15_p187g66 at 59.422 kb on - strand, within HP15_p187g66 at 59.429 kb on - strand, within HP15_p187g66 at 59.437 kb on - strand, within HP15_p187g66 at 59.506 kb on - strand, within HP15_p187g66 at 59.538 kb on + strand, within HP15_p187g66 at 59.553 kb on - strand, within HP15_p187g66 at 59.560 kb on - strand, within HP15_p187g66 at 59.562 kb on - strand, within HP15_p187g66 at 59.596 kb on + strand, within HP15_p187g66 at 59.601 kb on + strand, within HP15_p187g66 at 59.604 kb on - strand, within HP15_p187g66 at 59.604 kb on - strand, within HP15_p187g66 at 59.604 kb on - strand, within HP15_p187g66 at 59.609 kb on - strand, within HP15_p187g66 at 59.615 kb on - strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.629 kb on + strand, within HP15_p187g66 at 59.637 kb on - strand, within HP15_p187g66 at 59.637 kb on - strand, within HP15_p187g66 at 59.637 kb on - strand, within HP15_p187g66 at 59.637 kb on - strand, within HP15_p187g66 at 59.637 kb on - strand, within HP15_p187g66 at 59.694 kb on + strand at 59.726 kb on + strand at 59.733 kb on + strand at 59.734 kb on - strand at 59.741 kb on - strand at 59.743 kb on + strand at 59.766 kb on + strand at 59.768 kb on - strand at 59.790 kb on + strand at 59.841 kb on + strand at 59.874 kb on + strand at 59.925 kb on + strand, within HP15_p187g67 at 59.928 kb on - strand, within HP15_p187g67 at 59.955 kb on - strand, within HP15_p187g67 at 60.006 kb on + strand, within HP15_p187g67 at 60.015 kb on - strand, within HP15_p187g67 at 60.020 kb on - strand, within HP15_p187g67 at 60.027 kb on + strand, within HP15_p187g67 at 60.105 kb on + strand, within HP15_p187g67 at 60.105 kb on + strand, within HP15_p187g67 at 60.113 kb on - strand, within HP15_p187g67 at 60.113 kb on - strand, within HP15_p187g67 at 60.153 kb on + strand, within HP15_p187g67 at 60.161 kb on - strand, within HP15_p187g67 at 60.161 kb on - strand, within HP15_p187g67 at 60.207 kb on + strand, within HP15_p187g67 at 60.207 kb on + strand, within HP15_p187g67 at 60.262 kb on + strand, within HP15_p187g67 at 60.262 kb on + strand, within HP15_p187g67 at 60.269 kb on - strand, within HP15_p187g67 at 60.293 kb on - strand, within HP15_p187g67 at 60.302 kb on + strand, within HP15_p187g67 at 60.302 kb on + strand, within HP15_p187g67 at 60.302 kb on + strand, within HP15_p187g67 at 60.310 kb on - strand, within HP15_p187g67 at 60.311 kb on - strand, within HP15_p187g67 at 60.333 kb on + strand, within HP15_p187g67 at 60.341 kb on - strand, within HP15_p187g67 at 60.341 kb on - strand, within HP15_p187g67 at 60.369 kb on + strand, within HP15_p187g67 at 60.401 kb on + strand, within HP15_p187g67 at 60.424 kb on - strand, within HP15_p187g67 at 60.425 kb on + strand, within HP15_p187g67 at 60.425 kb on - strand, within HP15_p187g67 at 60.449 kb on + strand, within HP15_p187g67 at 60.457 kb on - strand, within HP15_p187g67 at 60.457 kb on - strand, within HP15_p187g67 at 60.457 kb on - strand, within HP15_p187g67 at 60.471 kb on - strand, within HP15_p187g67 at 60.471 kb on - strand, within HP15_p187g67 at 60.492 kb on - strand, within HP15_p187g67 at 60.540 kb on - strand, within HP15_p187g67 at 60.550 kb on - strand, within HP15_p187g67 at 60.566 kb on - strand, within HP15_p187g67 at 60.568 kb on + strand, within HP15_p187g67 at 60.620 kb on + strand, within HP15_p187g67 at 60.635 kb on + strand, within HP15_p187g67 at 60.635 kb on + strand, within HP15_p187g67 at 60.655 kb on + strand, within HP15_p187g67 at 60.685 kb on + strand, within HP15_p187g67 at 60.715 kb on - strand, within HP15_p187g67 at 60.715 kb on - strand, within HP15_p187g67 at 60.723 kb on + strand, within HP15_p187g67 at 60.729 kb on - strand, within HP15_p187g67 at 60.746 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67 at 60.780 kb on + strand, within HP15_p187g67
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 57,892 + +0.2 57,900 + +0.4 57,900 + +1.1 57,900 + +0.6 57,900 + -0.4 57,908 - -0.3 57,917 + -0.6 57,917 + -1.9 57,925 - +0.2 57,925 - +0.1 57,955 + -0.9 57,955 + +0.8 57,962 - +1.1 57,963 - +1.6 58,030 - HP15_p187g63 0.48 +1.2 58,030 - HP15_p187g63 0.48 +0.1 58,052 + HP15_p187g63 0.67 -0.3 58,086 - -0.3 58,104 - +0.1 58,121 + HP15_p187g64 0.20 -0.2 58,139 + HP15_p187g64 0.37 +0.3 58,139 + HP15_p187g64 0.37 -1.3 58,147 - HP15_p187g64 0.45 -0.1 58,147 - HP15_p187g64 0.45 -0.6 58,147 - HP15_p187g64 0.45 +0.6 58,193 + HP15_p187g64 0.89 -0.8 58,198 + +0.3 58,201 - -0.1 58,206 - +0.1 58,213 - -0.5 58,242 - -1.4 58,312 - HP15_p187g65 0.22 -0.5 58,339 + HP15_p187g65 0.27 +0.4 58,339 + HP15_p187g65 0.27 +0.2 58,351 + HP15_p187g65 0.30 -1.6 58,359 - HP15_p187g65 0.31 -0.5 58,359 - HP15_p187g65 0.31 -0.8 58,399 + HP15_p187g65 0.40 +0.7 58,399 + HP15_p187g65 0.40 +0.4 58,407 - HP15_p187g65 0.41 -1.3 58,407 - HP15_p187g65 0.41 +0.1 58,409 - HP15_p187g65 0.42 +0.0 58,425 + HP15_p187g65 0.45 -1.4 58,449 + HP15_p187g65 0.50 +0.3 58,455 - HP15_p187g65 0.51 +0.5 58,477 - HP15_p187g65 0.56 +1.1 58,498 - HP15_p187g65 0.60 +1.6 58,529 + HP15_p187g65 0.67 -1.0 58,541 + HP15_p187g65 0.69 +0.5 58,556 - HP15_p187g65 0.72 +1.1 58,562 - HP15_p187g65 0.74 +1.3 58,572 - HP15_p187g65 0.76 +0.7 58,583 + HP15_p187g65 0.78 -0.1 58,583 - HP15_p187g65 0.78 -0.5 58,604 - HP15_p187g65 0.82 -0.4 58,607 + HP15_p187g65 0.83 +1.1 58,616 + HP15_p187g65 0.85 -0.3 58,623 + HP15_p187g65 0.86 -0.2 58,624 - HP15_p187g65 0.87 +0.8 58,624 - HP15_p187g65 0.87 +1.6 58,628 + HP15_p187g65 0.88 +0.5 58,633 + HP15_p187g65 0.89 -1.5 58,641 - +0.2 58,813 + +0.7 58,853 + -2.9 58,888 - HP15_p187g66 0.13 +0.2 58,924 + HP15_p187g66 0.16 -0.6 58,945 + HP15_p187g66 0.18 +0.4 58,960 - HP15_p187g66 0.20 +0.8 58,961 + HP15_p187g66 0.20 -0.7 58,961 + HP15_p187g66 0.20 -0.9 58,969 - HP15_p187g66 0.21 -0.2 58,980 + HP15_p187g66 0.22 -1.1 58,983 + HP15_p187g66 0.22 +0.3 58,986 + HP15_p187g66 0.22 -0.6 58,986 + HP15_p187g66 0.22 +1.4 58,993 - HP15_p187g66 0.23 -0.2 59,021 + HP15_p187g66 0.26 +0.4 59,036 - HP15_p187g66 0.27 +1.4 59,038 + HP15_p187g66 0.27 +0.5 59,038 + HP15_p187g66 0.27 +0.8 59,046 - HP15_p187g66 0.28 +0.1 59,046 - HP15_p187g66 0.28 -0.4 59,051 - HP15_p187g66 0.29 +0.7 59,063 - HP15_p187g66 0.30 +0.1 59,073 - HP15_p187g66 0.31 +0.2 59,073 - HP15_p187g66 0.31 -0.1 59,087 + HP15_p187g66 0.32 -1.8 59,129 - HP15_p187g66 0.36 +0.6 59,172 + HP15_p187g66 0.40 -3.0 59,181 - HP15_p187g66 0.41 +0.6 59,188 + HP15_p187g66 0.42 -2.4 59,190 + HP15_p187g66 0.42 +0.1 59,195 + HP15_p187g66 0.43 +0.3 59,195 + HP15_p187g66 0.43 +1.3 59,212 + HP15_p187g66 0.44 -0.9 59,212 + HP15_p187g66 0.44 +0.3 59,310 - HP15_p187g66 0.54 -0.8 59,338 - HP15_p187g66 0.56 -0.9 59,395 - HP15_p187g66 0.62 +0.6 59,414 + HP15_p187g66 0.64 -0.0 59,414 + HP15_p187g66 0.64 +0.1 59,422 - HP15_p187g66 0.65 +2.4 59,429 - HP15_p187g66 0.65 -0.8 59,437 - HP15_p187g66 0.66 -0.1 59,506 - HP15_p187g66 0.73 +1.1 59,538 + HP15_p187g66 0.76 -0.2 59,553 - HP15_p187g66 0.77 -0.4 59,560 - HP15_p187g66 0.78 +0.1 59,562 - HP15_p187g66 0.78 +1.4 59,596 + HP15_p187g66 0.81 +0.1 59,601 + HP15_p187g66 0.82 +1.3 59,604 - HP15_p187g66 0.82 -1.7 59,604 - HP15_p187g66 0.82 -0.3 59,604 - HP15_p187g66 0.82 +0.4 59,609 - HP15_p187g66 0.83 +0.8 59,615 - HP15_p187g66 0.83 -1.8 59,629 + HP15_p187g66 0.85 +0.4 59,629 + HP15_p187g66 0.85 +0.4 59,629 + HP15_p187g66 0.85 -0.3 59,629 + HP15_p187g66 0.85 +0.1 59,629 + HP15_p187g66 0.85 -0.6 59,629 + HP15_p187g66 0.85 +0.2 59,629 + HP15_p187g66 0.85 -0.9 59,637 - HP15_p187g66 0.85 +0.5 59,637 - HP15_p187g66 0.85 +0.1 59,637 - HP15_p187g66 0.85 -0.9 59,637 - HP15_p187g66 0.85 +0.7 59,637 - HP15_p187g66 0.85 -0.2 59,694 + +0.4 59,726 + -0.1 59,733 + +0.1 59,734 - -0.9 59,741 - +0.2 59,743 + -1.4 59,766 + +0.6 59,768 - -0.3 59,790 + -0.1 59,841 + +0.8 59,874 + -1.0 59,925 + HP15_p187g67 0.13 +0.6 59,928 - HP15_p187g67 0.13 +0.3 59,955 - HP15_p187g67 0.16 +0.1 60,006 + HP15_p187g67 0.20 +0.8 60,015 - HP15_p187g67 0.21 -1.3 60,020 - HP15_p187g67 0.21 -2.8 60,027 + HP15_p187g67 0.22 +0.2 60,105 + HP15_p187g67 0.28 +0.1 60,105 + HP15_p187g67 0.28 +0.5 60,113 - HP15_p187g67 0.29 -0.3 60,113 - HP15_p187g67 0.29 -0.2 60,153 + HP15_p187g67 0.32 +0.8 60,161 - HP15_p187g67 0.33 +1.1 60,161 - HP15_p187g67 0.33 +0.3 60,207 + HP15_p187g67 0.37 +1.3 60,207 + HP15_p187g67 0.37 +1.1 60,262 + HP15_p187g67 0.42 +0.3 60,262 + HP15_p187g67 0.42 -0.4 60,269 - HP15_p187g67 0.42 +0.2 60,293 - HP15_p187g67 0.44 -0.6 60,302 + HP15_p187g67 0.45 -0.9 60,302 + HP15_p187g67 0.45 -1.2 60,302 + HP15_p187g67 0.45 +0.5 60,310 - HP15_p187g67 0.46 +1.1 60,311 - HP15_p187g67 0.46 +0.2 60,333 + HP15_p187g67 0.48 -0.4 60,341 - HP15_p187g67 0.48 +0.1 60,341 - HP15_p187g67 0.48 +0.1 60,369 + HP15_p187g67 0.51 +1.1 60,401 + HP15_p187g67 0.53 +0.1 60,424 - HP15_p187g67 0.55 +0.1 60,425 + HP15_p187g67 0.55 +0.4 60,425 - HP15_p187g67 0.55 +1.2 60,449 + HP15_p187g67 0.58 +1.1 60,457 - HP15_p187g67 0.58 +0.3 60,457 - HP15_p187g67 0.58 -0.3 60,457 - HP15_p187g67 0.58 -0.2 60,471 - HP15_p187g67 0.59 +0.3 60,471 - HP15_p187g67 0.59 -1.3 60,492 - HP15_p187g67 0.61 -0.6 60,540 - HP15_p187g67 0.65 -0.1 60,550 - HP15_p187g67 0.66 +0.3 60,566 - HP15_p187g67 0.67 +0.1 60,568 + HP15_p187g67 0.68 +0.3 60,620 + HP15_p187g67 0.72 +0.6 60,635 + HP15_p187g67 0.73 +0.1 60,635 + HP15_p187g67 0.73 +1.4 60,655 + HP15_p187g67 0.75 -0.7 60,685 + HP15_p187g67 0.77 +0.9 60,715 - HP15_p187g67 0.80 +0.6 60,715 - HP15_p187g67 0.80 +0.3 60,723 + HP15_p187g67 0.81 -0.9 60,729 - HP15_p187g67 0.81 -0.5 60,746 + HP15_p187g67 0.83 +0.3 60,780 + HP15_p187g67 0.86 -0.3 60,780 + HP15_p187g67 0.86 -0.2 60,780 + HP15_p187g67 0.86 -0.2 60,780 + HP15_p187g67 0.86 +0.7 60,780 + HP15_p187g67 0.86 -0.1 60,780 + HP15_p187g67 0.86 +1.6
Or see this region's nucleotide sequence