Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4174 and HP15_4175 overlap by 20 nucleotides HP15_4175 and HP15_4176 are separated by 361 nucleotides
HP15_4174: HP15_4174 - formate dehydrogenase, alpha subunit, at 4,410,438 to 4,413,338
_4174
HP15_4175: HP15_4175 - formate dehydrogenase, subunit FdhD, at 4,413,319 to 4,414,173
_4175
HP15_4176: HP15_4176 - electron-transferring-flavoprotein dehydrogenase, at 4,414,535 to 4,416,187
_4176
Position (kb)
4413
4414
4415 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4412.374 kb on + strand, within HP15_4174 at 4412.391 kb on + strand, within HP15_4174 at 4412.392 kb on + strand, within HP15_4174 at 4412.392 kb on + strand, within HP15_4174 at 4412.549 kb on - strand, within HP15_4174 at 4412.549 kb on - strand, within HP15_4174 at 4412.721 kb on - strand, within HP15_4174 at 4412.813 kb on - strand, within HP15_4174 at 4412.814 kb on - strand, within HP15_4174 at 4412.814 kb on - strand, within HP15_4174 at 4413.006 kb on + strand, within HP15_4174 at 4413.014 kb on - strand, within HP15_4174 at 4413.016 kb on + strand, within HP15_4174 at 4413.024 kb on - strand, within HP15_4174 at 4413.042 kb on - strand, within HP15_4174 at 4413.060 kb on - strand at 4413.065 kb on - strand at 4413.098 kb on + strand at 4413.103 kb on + strand at 4413.111 kb on - strand at 4413.111 kb on - strand at 4413.115 kb on - strand at 4413.116 kb on - strand at 4413.126 kb on - strand at 4413.162 kb on + strand at 4413.199 kb on - strand at 4413.258 kb on - strand at 4413.309 kb on - strand at 4413.341 kb on - strand at 4413.346 kb on + strand at 4413.360 kb on - strand at 4413.433 kb on - strand, within HP15_4175 at 4413.562 kb on - strand, within HP15_4175 at 4413.681 kb on - strand, within HP15_4175 at 4413.692 kb on - strand, within HP15_4175 at 4413.714 kb on + strand, within HP15_4175 at 4413.714 kb on + strand, within HP15_4175 at 4413.734 kb on + strand, within HP15_4175 at 4413.759 kb on - strand, within HP15_4175 at 4413.760 kb on - strand, within HP15_4175 at 4413.812 kb on + strand, within HP15_4175 at 4413.812 kb on + strand, within HP15_4175 at 4413.820 kb on - strand, within HP15_4175 at 4413.820 kb on - strand, within HP15_4175 at 4413.853 kb on + strand, within HP15_4175 at 4413.878 kb on - strand, within HP15_4175 at 4413.925 kb on + strand, within HP15_4175 at 4413.926 kb on - strand, within HP15_4175 at 4413.968 kb on - strand, within HP15_4175 at 4414.006 kb on - strand, within HP15_4175 at 4414.013 kb on + strand, within HP15_4175 at 4414.024 kb on + strand, within HP15_4175 at 4414.047 kb on - strand, within HP15_4175 at 4414.081 kb on + strand, within HP15_4175 at 4414.102 kb on + strand at 4414.112 kb on + strand at 4414.265 kb on + strand at 4414.328 kb on - strand at 4414.328 kb on - strand at 4414.328 kb on - strand at 4414.328 kb on - strand at 4414.328 kb on - strand at 4414.365 kb on + strand at 4414.411 kb on - strand at 4414.422 kb on + strand at 4414.474 kb on + strand at 4414.488 kb on + strand at 4414.496 kb on - strand at 4414.496 kb on - strand at 4414.532 kb on + strand at 4414.966 kb on + strand, within HP15_4176
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,412,374 + HP15_4174 0.67 +1.1 4,412,391 + HP15_4174 0.67 -1.1 4,412,392 + HP15_4174 0.67 +0.6 4,412,392 + HP15_4174 0.67 +0.6 4,412,549 - HP15_4174 0.73 -1.8 4,412,549 - HP15_4174 0.73 +0.5 4,412,721 - HP15_4174 0.79 +0.6 4,412,813 - HP15_4174 0.82 +0.3 4,412,814 - HP15_4174 0.82 +0.5 4,412,814 - HP15_4174 0.82 -0.1 4,413,006 + HP15_4174 0.89 +0.4 4,413,014 - HP15_4174 0.89 +0.5 4,413,016 + HP15_4174 0.89 +0.9 4,413,024 - HP15_4174 0.89 +1.0 4,413,042 - HP15_4174 0.90 +0.7 4,413,060 - +1.0 4,413,065 - -0.5 4,413,098 + -1.4 4,413,103 + +0.5 4,413,111 - -0.4 4,413,111 - -0.9 4,413,115 - -0.1 4,413,116 - -0.1 4,413,126 - +0.4 4,413,162 + +0.3 4,413,199 - -0.8 4,413,258 - -0.4 4,413,309 - +1.2 4,413,341 - +0.7 4,413,346 + +1.7 4,413,360 - -0.4 4,413,433 - HP15_4175 0.13 +0.3 4,413,562 - HP15_4175 0.28 -1.2 4,413,681 - HP15_4175 0.42 -0.1 4,413,692 - HP15_4175 0.44 +0.0 4,413,714 + HP15_4175 0.46 +0.5 4,413,714 + HP15_4175 0.46 +0.8 4,413,734 + HP15_4175 0.49 -0.7 4,413,759 - HP15_4175 0.51 +3.1 4,413,760 - HP15_4175 0.52 +0.1 4,413,812 + HP15_4175 0.58 -1.4 4,413,812 + HP15_4175 0.58 +0.2 4,413,820 - HP15_4175 0.59 +0.7 4,413,820 - HP15_4175 0.59 +0.2 4,413,853 + HP15_4175 0.62 +0.7 4,413,878 - HP15_4175 0.65 +0.6 4,413,925 + HP15_4175 0.71 -1.7 4,413,926 - HP15_4175 0.71 +0.8 4,413,968 - HP15_4175 0.76 +0.9 4,414,006 - HP15_4175 0.80 +0.9 4,414,013 + HP15_4175 0.81 +0.1 4,414,024 + HP15_4175 0.82 -0.0 4,414,047 - HP15_4175 0.85 -1.0 4,414,081 + HP15_4175 0.89 +0.5 4,414,102 + +0.8 4,414,112 + -0.8 4,414,265 + -1.1 4,414,328 - +0.5 4,414,328 - +1.0 4,414,328 - +0.6 4,414,328 - +0.3 4,414,328 - +0.2 4,414,365 + +0.4 4,414,411 - +0.2 4,414,422 + +0.7 4,414,474 + +0.5 4,414,488 + -0.4 4,414,496 - +0.1 4,414,496 - +0.9 4,414,532 + -0.7 4,414,966 + HP15_4176 0.26 -0.3
Or see this region's nucleotide sequence