Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3820 and HP15_3821 are separated by 162 nucleotides HP15_3821 and HP15_3822 are separated by 3 nucleotides HP15_3822 and HP15_3823 are separated by 238 nucleotides HP15_3823 and HP15_3824 are separated by 52 nucleotides
HP15_3820: HP15_3820 - major facilitator superfamily MFS_1, at 4,046,125 to 4,047,408
_3820
HP15_3821: HP15_3821 - transcriptional regulator, MarR family, at 4,047,571 to 4,047,996
_3821
HP15_3822: HP15_3822 - drug resistance transporter, EmrB/QacA family, at 4,048,000 to 4,049,391
_3822
HP15_3823: HP15_3823 - uncharacterized protein family UPF0016-like protein, at 4,049,630 to 4,050,199
_3823
HP15_3824: HP15_3824 - ErfK/YbiS/YcfS/YnhG family protein, at 4,050,252 to 4,051,298
_3824
Position (kb)
4047
4048
4049
4050 Strain fitness (log2 ratio)
-2
-1
0
1 at 4047.001 kb on + strand, within HP15_3820 at 4047.015 kb on + strand, within HP15_3820 at 4047.024 kb on + strand, within HP15_3820 at 4047.119 kb on - strand, within HP15_3820 at 4047.119 kb on - strand, within HP15_3820 at 4047.165 kb on + strand, within HP15_3820 at 4047.259 kb on - strand, within HP15_3820 at 4047.285 kb on - strand at 4047.383 kb on + strand at 4047.715 kb on - strand, within HP15_3821 at 4047.715 kb on - strand, within HP15_3821 at 4047.774 kb on - strand, within HP15_3821 at 4047.776 kb on + strand, within HP15_3821 at 4047.776 kb on + strand, within HP15_3821 at 4047.784 kb on - strand, within HP15_3821 at 4047.896 kb on - strand, within HP15_3821 at 4047.934 kb on - strand, within HP15_3821 at 4047.975 kb on - strand at 4048.055 kb on + strand at 4048.073 kb on - strand at 4048.093 kb on + strand at 4048.106 kb on + strand at 4048.216 kb on - strand, within HP15_3822 at 4048.241 kb on + strand, within HP15_3822 at 4048.242 kb on + strand, within HP15_3822 at 4048.280 kb on + strand, within HP15_3822 at 4048.337 kb on - strand, within HP15_3822 at 4048.377 kb on + strand, within HP15_3822 at 4048.385 kb on - strand, within HP15_3822 at 4048.431 kb on + strand, within HP15_3822 at 4048.439 kb on - strand, within HP15_3822 at 4048.460 kb on + strand, within HP15_3822 at 4048.604 kb on - strand, within HP15_3822 at 4048.639 kb on - strand, within HP15_3822 at 4048.672 kb on + strand, within HP15_3822 at 4048.672 kb on + strand, within HP15_3822 at 4048.699 kb on + strand, within HP15_3822 at 4048.748 kb on - strand, within HP15_3822 at 4048.796 kb on + strand, within HP15_3822 at 4048.866 kb on + strand, within HP15_3822 at 4048.874 kb on - strand, within HP15_3822 at 4048.874 kb on - strand, within HP15_3822 at 4048.875 kb on + strand, within HP15_3822 at 4048.914 kb on - strand, within HP15_3822 at 4048.914 kb on - strand, within HP15_3822 at 4048.919 kb on - strand, within HP15_3822 at 4048.923 kb on + strand, within HP15_3822 at 4048.997 kb on - strand, within HP15_3822 at 4049.018 kb on + strand, within HP15_3822 at 4049.018 kb on + strand, within HP15_3822 at 4049.023 kb on + strand, within HP15_3822 at 4049.026 kb on - strand, within HP15_3822 at 4049.028 kb on + strand, within HP15_3822 at 4049.041 kb on - strand, within HP15_3822 at 4049.073 kb on + strand, within HP15_3822 at 4049.106 kb on + strand, within HP15_3822 at 4049.111 kb on + strand, within HP15_3822 at 4049.112 kb on - strand, within HP15_3822 at 4049.114 kb on - strand, within HP15_3822 at 4049.114 kb on - strand, within HP15_3822 at 4049.116 kb on + strand, within HP15_3822 at 4049.116 kb on + strand, within HP15_3822 at 4049.119 kb on - strand, within HP15_3822 at 4049.124 kb on - strand, within HP15_3822 at 4049.124 kb on - strand, within HP15_3822 at 4049.124 kb on - strand, within HP15_3822 at 4049.124 kb on - strand, within HP15_3822 at 4049.124 kb on - strand, within HP15_3822 at 4049.213 kb on + strand, within HP15_3822 at 4049.213 kb on + strand, within HP15_3822 at 4049.249 kb on + strand, within HP15_3822 at 4049.251 kb on - strand, within HP15_3822 at 4049.294 kb on - strand at 4049.299 kb on - strand at 4049.299 kb on - strand at 4049.385 kb on + strand at 4049.385 kb on + strand at 4049.412 kb on - strand at 4049.443 kb on + strand at 4049.451 kb on - strand at 4049.525 kb on - strand at 4049.784 kb on - strand, within HP15_3823 at 4049.807 kb on + strand, within HP15_3823 at 4049.833 kb on - strand, within HP15_3823 at 4049.895 kb on - strand, within HP15_3823 at 4049.914 kb on + strand, within HP15_3823 at 4049.986 kb on + strand, within HP15_3823 at 4050.035 kb on + strand, within HP15_3823 at 4050.038 kb on - strand, within HP15_3823 at 4050.042 kb on + strand, within HP15_3823 at 4050.077 kb on - strand, within HP15_3823 at 4050.113 kb on + strand, within HP15_3823 at 4050.171 kb on + strand at 4050.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,047,001 + HP15_3820 0.68 -1.0 4,047,015 + HP15_3820 0.69 +0.0 4,047,024 + HP15_3820 0.70 +1.5 4,047,119 - HP15_3820 0.77 +0.2 4,047,119 - HP15_3820 0.77 +0.6 4,047,165 + HP15_3820 0.81 +0.8 4,047,259 - HP15_3820 0.88 -1.9 4,047,285 - -0.6 4,047,383 + -0.2 4,047,715 - HP15_3821 0.34 +0.3 4,047,715 - HP15_3821 0.34 +0.2 4,047,774 - HP15_3821 0.48 +0.2 4,047,776 + HP15_3821 0.48 +1.2 4,047,776 + HP15_3821 0.48 +1.7 4,047,784 - HP15_3821 0.50 +0.5 4,047,896 - HP15_3821 0.76 +1.5 4,047,934 - HP15_3821 0.85 +1.2 4,047,975 - +0.5 4,048,055 + +1.4 4,048,073 - -0.6 4,048,093 + -1.9 4,048,106 + -0.2 4,048,216 - HP15_3822 0.16 +0.0 4,048,241 + HP15_3822 0.17 +0.6 4,048,242 + HP15_3822 0.17 +0.6 4,048,280 + HP15_3822 0.20 +1.1 4,048,337 - HP15_3822 0.24 +0.4 4,048,377 + HP15_3822 0.27 -1.2 4,048,385 - HP15_3822 0.28 +0.8 4,048,431 + HP15_3822 0.31 -0.1 4,048,439 - HP15_3822 0.32 +0.8 4,048,460 + HP15_3822 0.33 -0.3 4,048,604 - HP15_3822 0.43 +0.1 4,048,639 - HP15_3822 0.46 -0.2 4,048,672 + HP15_3822 0.48 -1.1 4,048,672 + HP15_3822 0.48 +0.7 4,048,699 + HP15_3822 0.50 +0.4 4,048,748 - HP15_3822 0.54 -0.4 4,048,796 + HP15_3822 0.57 +0.5 4,048,866 + HP15_3822 0.62 -0.2 4,048,874 - HP15_3822 0.63 +1.0 4,048,874 - HP15_3822 0.63 +0.5 4,048,875 + HP15_3822 0.63 +0.2 4,048,914 - HP15_3822 0.66 +0.1 4,048,914 - HP15_3822 0.66 +0.7 4,048,919 - HP15_3822 0.66 -0.0 4,048,923 + HP15_3822 0.66 +0.8 4,048,997 - HP15_3822 0.72 +0.0 4,049,018 + HP15_3822 0.73 +0.3 4,049,018 + HP15_3822 0.73 +0.1 4,049,023 + HP15_3822 0.73 +0.1 4,049,026 - HP15_3822 0.74 +1.4 4,049,028 + HP15_3822 0.74 +0.3 4,049,041 - HP15_3822 0.75 +0.8 4,049,073 + HP15_3822 0.77 -0.7 4,049,106 + HP15_3822 0.79 +0.5 4,049,111 + HP15_3822 0.80 +0.3 4,049,112 - HP15_3822 0.80 +1.3 4,049,114 - HP15_3822 0.80 +0.5 4,049,114 - HP15_3822 0.80 +0.5 4,049,116 + HP15_3822 0.80 +0.2 4,049,116 + HP15_3822 0.80 -0.1 4,049,119 - HP15_3822 0.80 -2.1 4,049,124 - HP15_3822 0.81 +1.7 4,049,124 - HP15_3822 0.81 +0.8 4,049,124 - HP15_3822 0.81 +0.8 4,049,124 - HP15_3822 0.81 +0.7 4,049,124 - HP15_3822 0.81 +0.5 4,049,213 + HP15_3822 0.87 +0.9 4,049,213 + HP15_3822 0.87 +0.1 4,049,249 + HP15_3822 0.90 +0.6 4,049,251 - HP15_3822 0.90 +1.3 4,049,294 - +0.8 4,049,299 - +0.7 4,049,299 - +0.6 4,049,385 + -0.3 4,049,385 + -2.1 4,049,412 - -0.5 4,049,443 + +0.7 4,049,451 - +0.1 4,049,525 - -1.1 4,049,784 - HP15_3823 0.27 -1.4 4,049,807 + HP15_3823 0.31 -0.7 4,049,833 - HP15_3823 0.36 -0.6 4,049,895 - HP15_3823 0.46 +0.1 4,049,914 + HP15_3823 0.50 -1.3 4,049,986 + HP15_3823 0.62 -0.5 4,050,035 + HP15_3823 0.71 -0.2 4,050,038 - HP15_3823 0.72 +0.3 4,050,042 + HP15_3823 0.72 -0.7 4,050,077 - HP15_3823 0.78 +1.2 4,050,113 + HP15_3823 0.85 -0.1 4,050,171 + +0.3 4,050,171 + -0.6
Or see this region's nucleotide sequence