Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3789 and HP15_3790 are separated by 112 nucleotides HP15_3790 and HP15_3791 are separated by 11 nucleotides HP15_3791 and HP15_3792 are separated by 318 nucleotides
HP15_3789: HP15_3789 - conserved hypothetical protein, membrane, at 4,010,899 to 4,012,308
_3789
HP15_3790: HP15_3790 - conserved hypothetical protein, at 4,012,421 to 4,012,768
_3790
HP15_3791: HP15_3791 - lipase/esterase, at 4,012,780 to 4,013,655
_3791
HP15_3792: HP15_3792 - D-(-)-3-hydroxybutyrate oligomer hydrolase precursor, at 4,013,974 to 4,016,151
_3792
Position (kb)
4012
4013
4014 Strain fitness (log2 ratio)
-2
-1
0
1 at 4011.811 kb on + strand, within HP15_3789 at 4011.824 kb on - strand, within HP15_3789 at 4011.840 kb on - strand, within HP15_3789 at 4011.842 kb on + strand, within HP15_3789 at 4011.935 kb on + strand, within HP15_3789 at 4011.935 kb on + strand, within HP15_3789 at 4011.935 kb on + strand, within HP15_3789 at 4011.943 kb on - strand, within HP15_3789 at 4011.943 kb on - strand, within HP15_3789 at 4012.021 kb on - strand, within HP15_3789 at 4012.242 kb on + strand at 4012.247 kb on + strand at 4012.364 kb on + strand at 4012.394 kb on + strand at 4012.419 kb on + strand at 4012.485 kb on + strand, within HP15_3790 at 4012.544 kb on - strand, within HP15_3790 at 4012.544 kb on - strand, within HP15_3790 at 4012.578 kb on - strand, within HP15_3790 at 4012.622 kb on - strand, within HP15_3790 at 4012.632 kb on - strand, within HP15_3790 at 4012.634 kb on + strand, within HP15_3790 at 4012.634 kb on - strand, within HP15_3790 at 4012.733 kb on + strand, within HP15_3790 at 4012.893 kb on + strand, within HP15_3791 at 4012.894 kb on - strand, within HP15_3791 at 4012.922 kb on + strand, within HP15_3791 at 4013.091 kb on - strand, within HP15_3791 at 4013.306 kb on + strand, within HP15_3791 at 4013.362 kb on - strand, within HP15_3791 at 4013.364 kb on - strand, within HP15_3791 at 4013.429 kb on + strand, within HP15_3791 at 4013.472 kb on - strand, within HP15_3791 at 4013.563 kb on + strand, within HP15_3791 at 4013.615 kb on - strand at 4013.658 kb on - strand at 4013.720 kb on - strand at 4013.785 kb on - strand at 4013.877 kb on + strand at 4013.885 kb on - strand at 4013.885 kb on - strand at 4014.010 kb on + strand at 4014.061 kb on - strand at 4014.080 kb on - strand at 4014.085 kb on + strand at 4014.085 kb on + strand at 4014.152 kb on + strand at 4014.162 kb on + strand at 4014.217 kb on + strand, within HP15_3792 at 4014.225 kb on - strand, within HP15_3792 at 4014.239 kb on - strand, within HP15_3792 at 4014.252 kb on + strand, within HP15_3792 at 4014.262 kb on - strand, within HP15_3792 at 4014.315 kb on + strand, within HP15_3792 at 4014.323 kb on - strand, within HP15_3792 at 4014.350 kb on + strand, within HP15_3792 at 4014.363 kb on + strand, within HP15_3792 at 4014.363 kb on + strand, within HP15_3792 at 4014.371 kb on - strand, within HP15_3792 at 4014.371 kb on - strand, within HP15_3792 at 4014.371 kb on - strand, within HP15_3792 at 4014.385 kb on - strand, within HP15_3792 at 4014.385 kb on - strand, within HP15_3792 at 4014.387 kb on + strand, within HP15_3792 at 4014.387 kb on + strand, within HP15_3792 at 4014.395 kb on - strand, within HP15_3792 at 4014.409 kb on + strand, within HP15_3792 at 4014.423 kb on + strand, within HP15_3792 at 4014.481 kb on + strand, within HP15_3792 at 4014.489 kb on - strand, within HP15_3792 at 4014.580 kb on + strand, within HP15_3792 at 4014.580 kb on + strand, within HP15_3792 at 4014.580 kb on + strand, within HP15_3792 at 4014.580 kb on + strand, within HP15_3792 at 4014.582 kb on + strand, within HP15_3792 at 4014.622 kb on - strand, within HP15_3792 at 4014.637 kb on + strand, within HP15_3792
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 4,011,811 + HP15_3789 0.65 +0.4 4,011,824 - HP15_3789 0.66 -0.2 4,011,840 - HP15_3789 0.67 +0.2 4,011,842 + HP15_3789 0.67 +1.2 4,011,935 + HP15_3789 0.73 +0.8 4,011,935 + HP15_3789 0.73 +1.3 4,011,935 + HP15_3789 0.73 -0.7 4,011,943 - HP15_3789 0.74 -0.1 4,011,943 - HP15_3789 0.74 +0.7 4,012,021 - HP15_3789 0.80 +0.7 4,012,242 + +0.9 4,012,247 + -1.1 4,012,364 + -2.4 4,012,394 + -0.7 4,012,419 + -2.7 4,012,485 + HP15_3790 0.18 +0.5 4,012,544 - HP15_3790 0.35 +0.1 4,012,544 - HP15_3790 0.35 +0.9 4,012,578 - HP15_3790 0.45 +0.2 4,012,622 - HP15_3790 0.58 -0.2 4,012,632 - HP15_3790 0.61 -0.9 4,012,634 + HP15_3790 0.61 +0.7 4,012,634 - HP15_3790 0.61 -0.7 4,012,733 + HP15_3790 0.90 +1.7 4,012,893 + HP15_3791 0.13 +0.7 4,012,894 - HP15_3791 0.13 +0.2 4,012,922 + HP15_3791 0.16 -0.1 4,013,091 - HP15_3791 0.36 -1.4 4,013,306 + HP15_3791 0.60 +0.1 4,013,362 - HP15_3791 0.66 -0.1 4,013,364 - HP15_3791 0.67 -2.7 4,013,429 + HP15_3791 0.74 -0.2 4,013,472 - HP15_3791 0.79 +0.7 4,013,563 + HP15_3791 0.89 +0.4 4,013,615 - -2.1 4,013,658 - +0.4 4,013,720 - -0.0 4,013,785 - +0.3 4,013,877 + -0.9 4,013,885 - -0.1 4,013,885 - +0.3 4,014,010 + +0.4 4,014,061 - -2.4 4,014,080 - -1.7 4,014,085 + -0.0 4,014,085 + +0.3 4,014,152 + -0.1 4,014,162 + +1.0 4,014,217 + HP15_3792 0.11 -0.5 4,014,225 - HP15_3792 0.12 -2.3 4,014,239 - HP15_3792 0.12 -0.1 4,014,252 + HP15_3792 0.13 -0.9 4,014,262 - HP15_3792 0.13 +0.3 4,014,315 + HP15_3792 0.16 -2.1 4,014,323 - HP15_3792 0.16 +0.3 4,014,350 + HP15_3792 0.17 +0.3 4,014,363 + HP15_3792 0.18 -0.2 4,014,363 + HP15_3792 0.18 +0.4 4,014,371 - HP15_3792 0.18 -0.9 4,014,371 - HP15_3792 0.18 -0.2 4,014,371 - HP15_3792 0.18 -0.6 4,014,385 - HP15_3792 0.19 -0.8 4,014,385 - HP15_3792 0.19 +1.5 4,014,387 + HP15_3792 0.19 -0.1 4,014,387 + HP15_3792 0.19 +0.5 4,014,395 - HP15_3792 0.19 -0.7 4,014,409 + HP15_3792 0.20 -0.1 4,014,423 + HP15_3792 0.21 +0.3 4,014,481 + HP15_3792 0.23 -0.7 4,014,489 - HP15_3792 0.24 -1.3 4,014,580 + HP15_3792 0.28 -0.1 4,014,580 + HP15_3792 0.28 -0.2 4,014,580 + HP15_3792 0.28 -0.6 4,014,580 + HP15_3792 0.28 -0.1 4,014,582 + HP15_3792 0.28 +0.2 4,014,622 - HP15_3792 0.30 +0.9 4,014,637 + HP15_3792 0.30 -0.2
Or see this region's nucleotide sequence