Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3720 and HP15_3721 overlap by 4 nucleotides HP15_3721 and HP15_3722 are separated by 76 nucleotides HP15_3722 and HP15_3723 are separated by 519 nucleotides
HP15_3720: HP15_3720 - DNA damage response nuclease (from data) , at 3,933,962 to 3,935,671
_3720
HP15_3721: HP15_3721 - Rad3-related DNA helicase, at 3,935,668 to 3,937,965
_3721
HP15_3722: HP15_3722 - hypothetical protein, at 3,938,042 to 3,938,428
_3722
HP15_3723: HP15_3723 - PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components, at 3,938,948 to 3,941,884
_3723
Position (kb)
3935
3936
3937
3938 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 3934.670 kb on + strand, within HP15_3720 at 3934.673 kb on - strand, within HP15_3720 at 3934.881 kb on - strand, within HP15_3720 at 3934.920 kb on + strand, within HP15_3720 at 3934.920 kb on + strand, within HP15_3720 at 3934.943 kb on + strand, within HP15_3720 at 3935.039 kb on - strand, within HP15_3720 at 3935.055 kb on - strand, within HP15_3720 at 3935.055 kb on - strand, within HP15_3720 at 3935.060 kb on - strand, within HP15_3720 at 3935.081 kb on + strand, within HP15_3720 at 3935.132 kb on + strand, within HP15_3720 at 3935.236 kb on - strand, within HP15_3720 at 3935.236 kb on - strand, within HP15_3720 at 3935.243 kb on + strand, within HP15_3720 at 3935.280 kb on + strand, within HP15_3720 at 3935.339 kb on + strand, within HP15_3720 at 3935.339 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.349 kb on + strand, within HP15_3720 at 3935.397 kb on + strand, within HP15_3720 at 3935.402 kb on + strand, within HP15_3720 at 3935.402 kb on + strand, within HP15_3720 at 3935.410 kb on - strand, within HP15_3720 at 3935.410 kb on - strand, within HP15_3720 at 3935.412 kb on + strand, within HP15_3720 at 3935.463 kb on + strand, within HP15_3720 at 3935.550 kb on - strand at 3935.556 kb on + strand at 3935.617 kb on - strand at 3935.713 kb on + strand at 3935.753 kb on + strand at 3935.761 kb on - strand at 3935.845 kb on + strand at 3935.918 kb on + strand, within HP15_3721 at 3935.986 kb on + strand, within HP15_3721 at 3935.989 kb on + strand, within HP15_3721 at 3935.999 kb on - strand, within HP15_3721 at 3936.025 kb on - strand, within HP15_3721 at 3936.109 kb on + strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.143 kb on - strand, within HP15_3721 at 3936.161 kb on + strand, within HP15_3721 at 3936.171 kb on + strand, within HP15_3721 at 3936.183 kb on + strand, within HP15_3721 at 3936.183 kb on + strand, within HP15_3721 at 3936.226 kb on - strand, within HP15_3721 at 3936.293 kb on + strand, within HP15_3721 at 3936.301 kb on - strand, within HP15_3721 at 3936.311 kb on - strand, within HP15_3721 at 3936.369 kb on + strand, within HP15_3721 at 3936.429 kb on + strand, within HP15_3721 at 3936.450 kb on + strand, within HP15_3721 at 3936.453 kb on - strand, within HP15_3721 at 3936.453 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.458 kb on - strand, within HP15_3721 at 3936.475 kb on - strand, within HP15_3721 at 3936.761 kb on + strand, within HP15_3721 at 3936.761 kb on + strand, within HP15_3721 at 3936.785 kb on + strand, within HP15_3721 at 3936.798 kb on + strand, within HP15_3721 at 3936.946 kb on + strand, within HP15_3721 at 3936.954 kb on - strand, within HP15_3721 at 3937.118 kb on + strand, within HP15_3721 at 3937.155 kb on - strand, within HP15_3721 at 3937.246 kb on + strand, within HP15_3721 at 3937.309 kb on + strand, within HP15_3721 at 3937.350 kb on + strand, within HP15_3721 at 3937.398 kb on - strand, within HP15_3721 at 3937.563 kb on - strand, within HP15_3721 at 3937.594 kb on + strand, within HP15_3721 at 3937.611 kb on - strand, within HP15_3721 at 3937.618 kb on + strand, within HP15_3721 at 3937.622 kb on + strand, within HP15_3721 at 3937.625 kb on - strand, within HP15_3721 at 3937.695 kb on - strand, within HP15_3721 at 3937.724 kb on + strand, within HP15_3721 at 3937.765 kb on + strand at 3937.829 kb on + strand at 3937.928 kb on + strand at 3937.928 kb on - strand at 3938.020 kb on + strand at 3938.069 kb on - strand at 3938.174 kb on - strand, within HP15_3722 at 3938.174 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.253 kb on - strand, within HP15_3722 at 3938.274 kb on + strand, within HP15_3722 at 3938.282 kb on - strand, within HP15_3722 at 3938.295 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.398 kb on + strand at 3938.398 kb on + strand at 3938.424 kb on + strand at 3938.456 kb on - strand at 3938.657 kb on - strand at 3938.742 kb on + strand at 3938.750 kb on - strand at 3938.750 kb on - strand at 3938.822 kb on + strand at 3938.957 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,934,670 + HP15_3720 0.41 +0.5 3,934,673 - HP15_3720 0.42 +0.3 3,934,881 - HP15_3720 0.54 -1.5 3,934,920 + HP15_3720 0.56 +0.8 3,934,920 + HP15_3720 0.56 +0.6 3,934,943 + HP15_3720 0.57 +0.2 3,935,039 - HP15_3720 0.63 +0.9 3,935,055 - HP15_3720 0.64 +0.6 3,935,055 - HP15_3720 0.64 +0.2 3,935,060 - HP15_3720 0.64 +0.2 3,935,081 + HP15_3720 0.65 -1.8 3,935,132 + HP15_3720 0.68 -0.1 3,935,236 - HP15_3720 0.75 -0.4 3,935,236 - HP15_3720 0.75 -0.8 3,935,243 + HP15_3720 0.75 -1.5 3,935,280 + HP15_3720 0.77 -0.1 3,935,339 + HP15_3720 0.81 +0.1 3,935,339 + HP15_3720 0.81 +0.6 3,935,349 + HP15_3720 0.81 -0.2 3,935,349 + HP15_3720 0.81 +0.8 3,935,349 + HP15_3720 0.81 +0.8 3,935,349 + HP15_3720 0.81 +0.3 3,935,349 + HP15_3720 0.81 -0.1 3,935,397 + HP15_3720 0.84 +0.9 3,935,402 + HP15_3720 0.84 +0.5 3,935,402 + HP15_3720 0.84 -2.4 3,935,410 - HP15_3720 0.85 -0.0 3,935,410 - HP15_3720 0.85 +0.2 3,935,412 + HP15_3720 0.85 -0.5 3,935,463 + HP15_3720 0.88 +0.7 3,935,550 - +0.2 3,935,556 + +1.3 3,935,617 - -0.7 3,935,713 + +0.3 3,935,753 + +0.4 3,935,761 - -1.1 3,935,845 + +0.5 3,935,918 + HP15_3721 0.11 -0.2 3,935,986 + HP15_3721 0.14 -0.9 3,935,989 + HP15_3721 0.14 -1.7 3,935,999 - HP15_3721 0.14 +0.3 3,936,025 - HP15_3721 0.16 +0.3 3,936,109 + HP15_3721 0.19 +0.9 3,936,143 - HP15_3721 0.21 -0.2 3,936,143 - HP15_3721 0.21 +0.8 3,936,143 - HP15_3721 0.21 -0.1 3,936,161 + HP15_3721 0.21 -0.9 3,936,171 + HP15_3721 0.22 -5.0 3,936,183 + HP15_3721 0.22 -0.7 3,936,183 + HP15_3721 0.22 -1.1 3,936,226 - HP15_3721 0.24 +0.3 3,936,293 + HP15_3721 0.27 -1.9 3,936,301 - HP15_3721 0.28 +0.4 3,936,311 - HP15_3721 0.28 -1.0 3,936,369 + HP15_3721 0.31 -0.5 3,936,429 + HP15_3721 0.33 -0.3 3,936,450 + HP15_3721 0.34 -0.7 3,936,453 - HP15_3721 0.34 +0.3 3,936,453 - HP15_3721 0.34 -2.7 3,936,458 - HP15_3721 0.34 -0.2 3,936,458 - HP15_3721 0.34 -0.1 3,936,458 - HP15_3721 0.34 -2.6 3,936,475 - HP15_3721 0.35 +0.1 3,936,761 + HP15_3721 0.48 -0.3 3,936,761 + HP15_3721 0.48 +0.7 3,936,785 + HP15_3721 0.49 +3.3 3,936,798 + HP15_3721 0.49 -0.9 3,936,946 + HP15_3721 0.56 +0.0 3,936,954 - HP15_3721 0.56 +0.1 3,937,118 + HP15_3721 0.63 -0.3 3,937,155 - HP15_3721 0.65 +1.3 3,937,246 + HP15_3721 0.69 +1.3 3,937,309 + HP15_3721 0.71 +0.2 3,937,350 + HP15_3721 0.73 +0.5 3,937,398 - HP15_3721 0.75 +0.4 3,937,563 - HP15_3721 0.82 -1.2 3,937,594 + HP15_3721 0.84 +0.3 3,937,611 - HP15_3721 0.85 -0.9 3,937,618 + HP15_3721 0.85 +0.3 3,937,622 + HP15_3721 0.85 -3.2 3,937,625 - HP15_3721 0.85 +0.0 3,937,695 - HP15_3721 0.88 -2.0 3,937,724 + HP15_3721 0.89 +0.4 3,937,765 + -1.4 3,937,829 + -0.2 3,937,928 + +1.5 3,937,928 - -0.5 3,938,020 + +0.8 3,938,069 - -0.0 3,938,174 - HP15_3722 0.34 +0.5 3,938,174 - HP15_3722 0.34 +0.2 3,938,195 - HP15_3722 0.40 +0.6 3,938,195 - HP15_3722 0.40 +0.2 3,938,253 - HP15_3722 0.55 +0.0 3,938,274 + HP15_3722 0.60 -0.2 3,938,282 - HP15_3722 0.62 +0.7 3,938,295 - HP15_3722 0.65 +0.2 3,938,322 - HP15_3722 0.72 +0.5 3,938,322 - HP15_3722 0.72 -0.1 3,938,398 + +0.5 3,938,398 + +0.4 3,938,424 + +0.4 3,938,456 - +0.6 3,938,657 - +0.1 3,938,742 + +0.2 3,938,750 - -0.8 3,938,750 - -0.8 3,938,822 + +0.4 3,938,957 + +0.5
Or see this region's nucleotide sequence