Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3710 and HP15_3711 overlap by 16 nucleotides HP15_3711 and HP15_3712 are separated by 67 nucleotides
HP15_3710: HP15_3710 - ABC transporter, ATP-binding/permease protein, at 3,918,044 to 3,919,861
_3710
HP15_3711: HP15_3711 - sensory box/GGDEF/GAF/EAL domain protein, at 3,919,846 to 3,921,195
_3711
HP15_3712: HP15_3712 - exonuclease V subunit alpha, at 3,921,263 to 3,923,536
_3712
Position (kb)
3919
3920
3921
3922 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3918.852 kb on - strand, within HP15_3710 at 3918.932 kb on + strand, within HP15_3710 at 3918.986 kb on - strand, within HP15_3710 at 3919.023 kb on - strand, within HP15_3710 at 3919.080 kb on + strand, within HP15_3710 at 3919.135 kb on - strand, within HP15_3710 at 3919.313 kb on + strand, within HP15_3710 at 3919.321 kb on - strand, within HP15_3710 at 3919.321 kb on - strand, within HP15_3710 at 3919.362 kb on - strand, within HP15_3710 at 3919.366 kb on + strand, within HP15_3710 at 3919.371 kb on + strand, within HP15_3710 at 3919.437 kb on - strand, within HP15_3710 at 3919.485 kb on - strand, within HP15_3710 at 3919.644 kb on - strand, within HP15_3710 at 3919.681 kb on - strand at 3919.794 kb on + strand at 3919.894 kb on + strand at 3919.902 kb on - strand at 3919.995 kb on - strand, within HP15_3711 at 3920.074 kb on + strand, within HP15_3711 at 3920.082 kb on - strand, within HP15_3711 at 3920.082 kb on - strand, within HP15_3711 at 3920.098 kb on - strand, within HP15_3711 at 3920.120 kb on + strand, within HP15_3711 at 3920.138 kb on + strand, within HP15_3711 at 3920.146 kb on - strand, within HP15_3711 at 3920.189 kb on - strand, within HP15_3711 at 3920.189 kb on - strand, within HP15_3711 at 3920.222 kb on + strand, within HP15_3711 at 3920.230 kb on - strand, within HP15_3711 at 3920.253 kb on - strand, within HP15_3711 at 3920.281 kb on - strand, within HP15_3711 at 3920.351 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.458 kb on + strand, within HP15_3711 at 3920.466 kb on - strand, within HP15_3711 at 3920.506 kb on + strand, within HP15_3711 at 3920.543 kb on - strand, within HP15_3711 at 3920.589 kb on + strand, within HP15_3711 at 3920.762 kb on + strand, within HP15_3711 at 3920.762 kb on + strand, within HP15_3711 at 3920.770 kb on - strand, within HP15_3711 at 3920.793 kb on + strand, within HP15_3711 at 3920.975 kb on + strand, within HP15_3711 at 3921.002 kb on - strand, within HP15_3711 at 3921.083 kb on - strand at 3921.204 kb on + strand at 3921.212 kb on - strand at 3921.225 kb on - strand at 3921.401 kb on - strand at 3921.403 kb on + strand at 3921.418 kb on - strand at 3921.457 kb on - strand at 3921.484 kb on + strand at 3921.494 kb on - strand, within HP15_3712 at 3921.501 kb on + strand, within HP15_3712 at 3921.501 kb on + strand, within HP15_3712 at 3921.588 kb on - strand, within HP15_3712 at 3922.013 kb on + strand, within HP15_3712 at 3922.137 kb on + strand, within HP15_3712 at 3922.148 kb on + strand, within HP15_3712 at 3922.182 kb on + strand, within HP15_3712
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,918,852 - HP15_3710 0.44 -0.2 3,918,932 + HP15_3710 0.49 +0.3 3,918,986 - HP15_3710 0.52 +0.4 3,919,023 - HP15_3710 0.54 +0.6 3,919,080 + HP15_3710 0.57 -0.2 3,919,135 - HP15_3710 0.60 +0.5 3,919,313 + HP15_3710 0.70 +0.6 3,919,321 - HP15_3710 0.70 +0.1 3,919,321 - HP15_3710 0.70 -1.9 3,919,362 - HP15_3710 0.72 -1.2 3,919,366 + HP15_3710 0.73 +0.0 3,919,371 + HP15_3710 0.73 +0.7 3,919,437 - HP15_3710 0.77 +0.3 3,919,485 - HP15_3710 0.79 -0.8 3,919,644 - HP15_3710 0.88 -1.0 3,919,681 - +0.2 3,919,794 + +0.3 3,919,894 + +0.7 3,919,902 - +0.1 3,919,995 - HP15_3711 0.11 +0.6 3,920,074 + HP15_3711 0.17 +0.5 3,920,082 - HP15_3711 0.17 -0.3 3,920,082 - HP15_3711 0.17 -1.1 3,920,098 - HP15_3711 0.19 -1.0 3,920,120 + HP15_3711 0.20 +0.2 3,920,138 + HP15_3711 0.22 +0.5 3,920,146 - HP15_3711 0.22 +0.3 3,920,189 - HP15_3711 0.25 +0.4 3,920,189 - HP15_3711 0.25 -0.4 3,920,222 + HP15_3711 0.28 -0.1 3,920,230 - HP15_3711 0.28 -0.3 3,920,253 - HP15_3711 0.30 -0.7 3,920,281 - HP15_3711 0.32 +0.5 3,920,351 + HP15_3711 0.37 -2.1 3,920,458 + HP15_3711 0.45 +0.3 3,920,458 + HP15_3711 0.45 -0.7 3,920,458 + HP15_3711 0.45 -1.4 3,920,458 + HP15_3711 0.45 +2.2 3,920,458 + HP15_3711 0.45 +0.4 3,920,458 + HP15_3711 0.45 -1.9 3,920,458 + HP15_3711 0.45 -2.8 3,920,458 + HP15_3711 0.45 -1.1 3,920,466 - HP15_3711 0.46 +2.9 3,920,506 + HP15_3711 0.49 +0.9 3,920,543 - HP15_3711 0.52 -0.7 3,920,589 + HP15_3711 0.55 +0.6 3,920,762 + HP15_3711 0.68 -0.4 3,920,762 + HP15_3711 0.68 +0.1 3,920,770 - HP15_3711 0.68 -0.2 3,920,793 + HP15_3711 0.70 +0.5 3,920,975 + HP15_3711 0.84 +0.0 3,921,002 - HP15_3711 0.86 +0.5 3,921,083 - +0.6 3,921,204 + -0.4 3,921,212 - +0.7 3,921,225 - -1.1 3,921,401 - +1.7 3,921,403 + -0.3 3,921,418 - +0.3 3,921,457 - -1.5 3,921,484 + -3.6 3,921,494 - HP15_3712 0.10 -0.1 3,921,501 + HP15_3712 0.10 -0.2 3,921,501 + HP15_3712 0.10 -0.4 3,921,588 - HP15_3712 0.14 -0.4 3,922,013 + HP15_3712 0.33 -2.2 3,922,137 + HP15_3712 0.38 +1.0 3,922,148 + HP15_3712 0.39 -1.9 3,922,182 + HP15_3712 0.40 -0.1
Or see this region's nucleotide sequence