Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3636 and HP15_3637 are separated by 102 nucleotides HP15_3637 and HP15_3638 are separated by 158 nucleotides HP15_3638 and HP15_3639 are separated by 101 nucleotides
HP15_3636: HP15_3636 - protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region, at 3,829,865 to 3,831,976
_3636
HP15_3637: HP15_3637 - tetratricopeptide TPR_2 repeat protein-like protein, at 3,832,079 to 3,832,924
_3637
HP15_3638: HP15_3638 - antibiotic biosynthesis monooxygenase domain protein, at 3,833,083 to 3,833,421
_3638
HP15_3639: HP15_3639 - tetratricopeptide repeat protein-like protein, at 3,833,523 to 3,834,347
_3639
Position (kb)
3832
3833 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3831.188 kb on - strand, within HP15_3636 at 3831.202 kb on - strand, within HP15_3636 at 3831.209 kb on + strand, within HP15_3636 at 3831.212 kb on + strand, within HP15_3636 at 3831.240 kb on - strand, within HP15_3636 at 3831.302 kb on - strand, within HP15_3636 at 3831.309 kb on + strand, within HP15_3636 at 3831.353 kb on - strand, within HP15_3636 at 3831.353 kb on - strand, within HP15_3636 at 3831.410 kb on + strand at 3831.410 kb on + strand, within HP15_3636 at 3831.418 kb on - strand, within HP15_3636 at 3831.441 kb on - strand, within HP15_3636 at 3831.468 kb on + strand, within HP15_3636 at 3831.468 kb on + strand, within HP15_3636 at 3831.468 kb on + strand, within HP15_3636 at 3831.476 kb on - strand, within HP15_3636 at 3831.476 kb on - strand, within HP15_3636 at 3831.481 kb on + strand, within HP15_3636 at 3831.527 kb on - strand, within HP15_3636 at 3831.533 kb on + strand, within HP15_3636 at 3831.541 kb on - strand, within HP15_3636 at 3831.550 kb on - strand, within HP15_3636 at 3831.552 kb on + strand, within HP15_3636 at 3831.557 kb on + strand, within HP15_3636 at 3831.560 kb on - strand, within HP15_3636 at 3831.570 kb on - strand, within HP15_3636 at 3831.572 kb on + strand, within HP15_3636 at 3831.639 kb on - strand, within HP15_3636 at 3831.639 kb on - strand, within HP15_3636 at 3831.666 kb on - strand, within HP15_3636 at 3831.681 kb on + strand, within HP15_3636 at 3831.691 kb on - strand, within HP15_3636 at 3831.696 kb on + strand, within HP15_3636 at 3831.770 kb on - strand at 3831.818 kb on + strand at 3831.818 kb on + strand at 3831.818 kb on + strand at 3831.818 kb on + strand at 3831.818 kb on + strand at 3831.826 kb on - strand at 3831.826 kb on - strand at 3831.933 kb on - strand at 3831.938 kb on + strand at 3831.954 kb on + strand at 3831.970 kb on + strand at 3831.971 kb on + strand at 3832.009 kb on + strand at 3832.019 kb on + strand at 3832.027 kb on - strand at 3832.289 kb on - strand, within HP15_3637 at 3832.327 kb on + strand, within HP15_3637 at 3832.460 kb on - strand, within HP15_3637 at 3832.490 kb on - strand, within HP15_3637 at 3832.574 kb on - strand, within HP15_3637 at 3832.702 kb on + strand, within HP15_3637 at 3832.702 kb on + strand, within HP15_3637 at 3832.710 kb on - strand, within HP15_3637 at 3832.710 kb on - strand, within HP15_3637 at 3832.804 kb on + strand, within HP15_3637 at 3832.810 kb on - strand, within HP15_3637 at 3832.877 kb on + strand at 3832.992 kb on + strand at 3833.000 kb on - strand at 3833.007 kb on + strand at 3833.053 kb on + strand at 3833.055 kb on + strand at 3833.084 kb on - strand at 3833.169 kb on + strand, within HP15_3638 at 3833.267 kb on + strand, within HP15_3638 at 3833.304 kb on - strand, within HP15_3638 at 3833.307 kb on - strand, within HP15_3638 at 3833.312 kb on - strand, within HP15_3638 at 3833.324 kb on - strand, within HP15_3638 at 3833.349 kb on + strand, within HP15_3638 at 3833.430 kb on + strand at 3833.510 kb on + strand at 3833.668 kb on + strand, within HP15_3639 at 3833.673 kb on + strand, within HP15_3639 at 3833.673 kb on + strand, within HP15_3639 at 3833.875 kb on + strand, within HP15_3639
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,831,188 - HP15_3636 0.63 -0.3 3,831,202 - HP15_3636 0.63 +0.7 3,831,209 + HP15_3636 0.64 -0.1 3,831,212 + HP15_3636 0.64 +1.8 3,831,240 - HP15_3636 0.65 +0.5 3,831,302 - HP15_3636 0.68 -0.2 3,831,309 + HP15_3636 0.68 -1.7 3,831,353 - HP15_3636 0.70 +0.3 3,831,353 - HP15_3636 0.70 -0.2 3,831,410 + -1.1 3,831,410 + HP15_3636 0.73 -0.4 3,831,418 - HP15_3636 0.74 +0.1 3,831,441 - HP15_3636 0.75 +1.4 3,831,468 + HP15_3636 0.76 +0.0 3,831,468 + HP15_3636 0.76 +0.9 3,831,468 + HP15_3636 0.76 -0.0 3,831,476 - HP15_3636 0.76 -0.1 3,831,476 - HP15_3636 0.76 -1.7 3,831,481 + HP15_3636 0.77 +0.1 3,831,527 - HP15_3636 0.79 +1.3 3,831,533 + HP15_3636 0.79 +1.4 3,831,541 - HP15_3636 0.79 -1.4 3,831,550 - HP15_3636 0.80 +0.6 3,831,552 + HP15_3636 0.80 +0.4 3,831,557 + HP15_3636 0.80 +0.1 3,831,560 - HP15_3636 0.80 +1.8 3,831,570 - HP15_3636 0.81 +1.3 3,831,572 + HP15_3636 0.81 +0.6 3,831,639 - HP15_3636 0.84 -0.3 3,831,639 - HP15_3636 0.84 +0.6 3,831,666 - HP15_3636 0.85 -0.2 3,831,681 + HP15_3636 0.86 -0.3 3,831,691 - HP15_3636 0.86 +0.8 3,831,696 + HP15_3636 0.87 +0.5 3,831,770 - +0.7 3,831,818 + +0.5 3,831,818 + -0.7 3,831,818 + -0.6 3,831,818 + -0.1 3,831,818 + +0.8 3,831,826 - -0.0 3,831,826 - -0.5 3,831,933 - +0.8 3,831,938 + +0.1 3,831,954 + +0.5 3,831,970 + +0.1 3,831,971 + +1.5 3,832,009 + +0.9 3,832,019 + -1.3 3,832,027 - -1.4 3,832,289 - HP15_3637 0.25 +0.3 3,832,327 + HP15_3637 0.29 +0.6 3,832,460 - HP15_3637 0.45 +0.9 3,832,490 - HP15_3637 0.49 -0.1 3,832,574 - HP15_3637 0.59 +0.8 3,832,702 + HP15_3637 0.74 +2.3 3,832,702 + HP15_3637 0.74 -2.1 3,832,710 - HP15_3637 0.75 +0.4 3,832,710 - HP15_3637 0.75 +0.9 3,832,804 + HP15_3637 0.86 +1.9 3,832,810 - HP15_3637 0.86 -0.2 3,832,877 + +0.3 3,832,992 + -1.0 3,833,000 - +0.3 3,833,007 + +0.1 3,833,053 + -1.2 3,833,055 + +0.3 3,833,084 - +0.4 3,833,169 + HP15_3638 0.25 +0.2 3,833,267 + HP15_3638 0.54 -0.8 3,833,304 - HP15_3638 0.65 -0.2 3,833,307 - HP15_3638 0.66 -0.5 3,833,312 - HP15_3638 0.68 -1.3 3,833,324 - HP15_3638 0.71 -0.4 3,833,349 + HP15_3638 0.78 -0.3 3,833,430 + +0.3 3,833,510 + +0.2 3,833,668 + HP15_3639 0.18 +0.4 3,833,673 + HP15_3639 0.18 +0.4 3,833,673 + HP15_3639 0.18 +0.2 3,833,875 + HP15_3639 0.43 -0.4
Or see this region's nucleotide sequence