Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3367 and HP15_3368 are separated by 216 nucleotides HP15_3368 and HP15_3369 are separated by 194 nucleotides HP15_3369 and HP15_3370 are separated by 22 nucleotides
HP15_3367: HP15_3367 - twin-arginine translocation pathway signal, at 3,533,526 to 3,535,268
_3367
HP15_3368: HP15_3368 - membrane protein containing DUF1282, at 3,535,485 to 3,536,096
_3368
HP15_3369: HP15_3369 - glutathione S-transferase-like protein, at 3,536,291 to 3,536,863
_3369
HP15_3370: HP15_3370 - alanine dehydrogenase, at 3,536,886 to 3,538,004
_3370
Position (kb)
3535
3536
3537 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3534.509 kb on - strand, within HP15_3367 at 3534.655 kb on - strand, within HP15_3367 at 3534.662 kb on + strand, within HP15_3367 at 3534.760 kb on + strand, within HP15_3367 at 3534.873 kb on + strand, within HP15_3367 at 3534.873 kb on + strand, within HP15_3367 at 3534.881 kb on - strand, within HP15_3367 at 3534.938 kb on - strand, within HP15_3367 at 3534.948 kb on + strand, within HP15_3367 at 3534.968 kb on + strand, within HP15_3367 at 3534.990 kb on + strand, within HP15_3367 at 3535.003 kb on - strand, within HP15_3367 at 3535.027 kb on + strand, within HP15_3367 at 3535.095 kb on - strand at 3535.096 kb on - strand at 3535.134 kb on - strand at 3535.136 kb on + strand at 3535.142 kb on + strand at 3535.142 kb on + strand at 3535.150 kb on - strand at 3535.163 kb on + strand at 3535.173 kb on + strand at 3535.173 kb on + strand at 3535.173 kb on + strand at 3535.173 kb on + strand at 3535.173 kb on + strand at 3535.173 kb on + strand at 3535.181 kb on - strand at 3535.181 kb on - strand at 3535.181 kb on - strand at 3535.186 kb on - strand at 3535.195 kb on - strand at 3535.222 kb on + strand at 3535.309 kb on + strand at 3535.317 kb on - strand at 3535.318 kb on - strand at 3535.502 kb on - strand at 3535.687 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.705 kb on + strand, within HP15_3368 at 3535.713 kb on - strand, within HP15_3368 at 3535.713 kb on - strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.731 kb on + strand, within HP15_3368 at 3535.739 kb on - strand, within HP15_3368 at 3535.749 kb on - strand, within HP15_3368 at 3535.760 kb on + strand, within HP15_3368 at 3535.768 kb on - strand, within HP15_3368 at 3535.770 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.825 kb on + strand, within HP15_3368 at 3535.833 kb on - strand, within HP15_3368 at 3535.867 kb on - strand, within HP15_3368 at 3535.893 kb on + strand, within HP15_3368 at 3536.083 kb on + strand at 3536.290 kb on + strand at 3536.305 kb on + strand at 3536.403 kb on - strand, within HP15_3369 at 3536.469 kb on - strand, within HP15_3369 at 3536.609 kb on - strand, within HP15_3369 at 3536.758 kb on + strand, within HP15_3369 at 3536.820 kb on - strand at 3536.855 kb on - strand at 3536.902 kb on + strand at 3536.910 kb on - strand at 3536.922 kb on - strand at 3536.922 kb on - strand at 3536.922 kb on - strand at 3536.991 kb on - strand at 3536.991 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 3,534,509 - HP15_3367 0.56 -0.7 3,534,655 - HP15_3367 0.65 +1.3 3,534,662 + HP15_3367 0.65 +0.1 3,534,760 + HP15_3367 0.71 -0.7 3,534,873 + HP15_3367 0.77 -0.5 3,534,873 + HP15_3367 0.77 +1.0 3,534,881 - HP15_3367 0.78 -0.0 3,534,938 - HP15_3367 0.81 +0.0 3,534,948 + HP15_3367 0.82 -0.5 3,534,968 + HP15_3367 0.83 +0.2 3,534,990 + HP15_3367 0.84 +0.3 3,535,003 - HP15_3367 0.85 -1.9 3,535,027 + HP15_3367 0.86 +0.4 3,535,095 - +1.6 3,535,096 - -0.3 3,535,134 - -0.7 3,535,136 + -1.5 3,535,142 + +0.8 3,535,142 + -0.9 3,535,150 - -0.2 3,535,163 + +1.5 3,535,173 + -0.6 3,535,173 + -1.2 3,535,173 + +0.1 3,535,173 + +0.1 3,535,173 + +0.5 3,535,173 + +0.4 3,535,181 - +0.2 3,535,181 - -1.1 3,535,181 - +0.2 3,535,186 - -1.0 3,535,195 - +0.1 3,535,222 + +0.9 3,535,309 + +0.8 3,535,317 - +0.0 3,535,318 - +0.3 3,535,502 - +0.2 3,535,687 + HP15_3368 0.33 +1.6 3,535,705 + HP15_3368 0.36 +0.3 3,535,705 + HP15_3368 0.36 +0.8 3,535,705 + HP15_3368 0.36 +0.1 3,535,705 + HP15_3368 0.36 +0.1 3,535,713 - HP15_3368 0.37 +0.3 3,535,713 - HP15_3368 0.37 -1.1 3,535,731 + HP15_3368 0.40 -2.5 3,535,731 + HP15_3368 0.40 +1.4 3,535,731 + HP15_3368 0.40 +0.5 3,535,739 - HP15_3368 0.42 -0.0 3,535,749 - HP15_3368 0.43 +0.7 3,535,760 + HP15_3368 0.45 -0.6 3,535,768 - HP15_3368 0.46 +0.3 3,535,770 + HP15_3368 0.47 -0.6 3,535,825 + HP15_3368 0.56 +0.1 3,535,825 + HP15_3368 0.56 +1.2 3,535,825 + HP15_3368 0.56 +2.2 3,535,833 - HP15_3368 0.57 +1.4 3,535,867 - HP15_3368 0.62 +0.3 3,535,893 + HP15_3368 0.67 +0.4 3,536,083 + -1.5 3,536,290 + +0.0 3,536,305 + -0.8 3,536,403 - HP15_3369 0.20 +0.1 3,536,469 - HP15_3369 0.31 -2.8 3,536,609 - HP15_3369 0.55 +0.8 3,536,758 + HP15_3369 0.82 -0.2 3,536,820 - +0.0 3,536,855 - -0.3 3,536,902 + +0.7 3,536,910 - +0.4 3,536,922 - +0.6 3,536,922 - +0.2 3,536,922 - -0.9 3,536,991 - -0.3 3,536,991 - -0.4
Or see this region's nucleotide sequence