Strain Fitness in Marinobacter adhaerens HP15 around HP15_330

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_329 and HP15_330 overlap by 11 nucleotidesHP15_330 and HP15_331 are separated by 50 nucleotidesHP15_331 and HP15_332 are separated by 61 nucleotides HP15_329: HP15_329 - two-component sensor, at 325,645 to 328,608 _329 HP15_330: HP15_330 - conserved hypothetical protein, membrane, at 328,598 to 328,774 _330 HP15_331: HP15_331 - glutamyl-Q tRNA(Asp) synthetase, at 328,825 to 329,697 _331 HP15_332: HP15_332 - transcriptional regulator, TraR/DksA family, at 329,759 to 330,199 _332 Position (kb) 328 329Strain fitness (log2 ratio) -2 -1 0 1at 327.624 kb on + strand, within HP15_329at 327.784 kb on - strand, within HP15_329at 328.094 kb on - strand, within HP15_329at 328.341 kb on - strandat 328.525 kb on - strandat 328.668 kb on - strand, within HP15_330at 328.679 kb on - strand, within HP15_330at 328.808 kb on + strandat 328.808 kb on + strandat 328.808 kb on + strandat 328.816 kb on - strandat 328.816 kb on - strandat 329.001 kb on - strand, within HP15_331at 329.099 kb on + strand, within HP15_331at 329.112 kb on - strand, within HP15_331at 329.120 kb on - strand, within HP15_331at 329.120 kb on - strand, within HP15_331at 329.131 kb on - strand, within HP15_331at 329.180 kb on + strand, within HP15_331at 329.188 kb on - strand, within HP15_331at 329.188 kb on - strand, within HP15_331at 329.193 kb on - strand, within HP15_331at 329.223 kb on - strand, within HP15_331at 329.225 kb on + strand, within HP15_331at 329.242 kb on - strand, within HP15_331at 329.246 kb on + strand, within HP15_331at 329.254 kb on - strand, within HP15_331at 329.354 kb on - strand, within HP15_331at 329.414 kb on + strand, within HP15_331at 329.449 kb on + strand, within HP15_331at 329.552 kb on - strand, within HP15_331at 329.562 kb on + strand, within HP15_331at 329.664 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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327,624 + HP15_329 0.67 +0.1
327,784 - HP15_329 0.72 -0.2
328,094 - HP15_329 0.83 +1.3
328,341 - +1.2
328,525 - -0.6
328,668 - HP15_330 0.40 +1.4
328,679 - HP15_330 0.46 +0.6
328,808 + -1.5
328,808 + -0.6
328,808 + -1.6
328,816 - +0.4
328,816 - +0.5
329,001 - HP15_331 0.20 +0.8
329,099 + HP15_331 0.31 -1.5
329,112 - HP15_331 0.33 +1.1
329,120 - HP15_331 0.34 -0.9
329,120 - HP15_331 0.34 -0.2
329,131 - HP15_331 0.35 +0.7
329,180 + HP15_331 0.41 -1.3
329,188 - HP15_331 0.42 +1.1
329,188 - HP15_331 0.42 +0.2
329,193 - HP15_331 0.42 -0.0
329,223 - HP15_331 0.46 -0.2
329,225 + HP15_331 0.46 -1.5
329,242 - HP15_331 0.48 -0.3
329,246 + HP15_331 0.48 -0.7
329,254 - HP15_331 0.49 -1.9
329,354 - HP15_331 0.61 -0.3
329,414 + HP15_331 0.67 -0.7
329,449 + HP15_331 0.71 +0.6
329,552 - HP15_331 0.83 -0.8
329,562 + HP15_331 0.84 -0.2
329,664 + -0.6

Or see this region's nucleotide sequence