Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2751 and HP15_2752 are separated by 52 nucleotides HP15_2752 and HP15_2753 are separated by 68 nucleotides
HP15_2751: HP15_2751 - conserved hypothetical protein, secreted, at 2,904,339 to 2,906,039
_2751
HP15_2752: HP15_2752 - glutathione-regulated potassium-efflux system protein kefC, at 2,906,092 to 2,907,975
_2752
HP15_2753: HP15_2753 - transcriptional regulator protein, LysR family, at 2,908,044 to 2,908,904
_2753
Position (kb)
2906
2907
2908 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2905.334 kb on - strand, within HP15_2751 at 2905.452 kb on + strand, within HP15_2751 at 2905.551 kb on + strand, within HP15_2751 at 2905.556 kb on + strand, within HP15_2751 at 2905.598 kb on + strand, within HP15_2751 at 2905.604 kb on + strand, within HP15_2751 at 2905.651 kb on + strand, within HP15_2751 at 2905.762 kb on + strand, within HP15_2751 at 2905.770 kb on - strand, within HP15_2751 at 2905.781 kb on + strand, within HP15_2751 at 2905.783 kb on + strand, within HP15_2751 at 2905.795 kb on + strand, within HP15_2751 at 2905.805 kb on + strand, within HP15_2751 at 2905.856 kb on - strand, within HP15_2751 at 2905.922 kb on + strand at 2905.930 kb on - strand at 2906.063 kb on + strand at 2906.142 kb on + strand at 2906.164 kb on + strand at 2906.167 kb on - strand at 2906.196 kb on - strand at 2906.337 kb on + strand, within HP15_2752 at 2906.393 kb on + strand, within HP15_2752 at 2906.448 kb on + strand, within HP15_2752 at 2906.493 kb on - strand, within HP15_2752 at 2906.498 kb on - strand, within HP15_2752 at 2906.498 kb on - strand, within HP15_2752 at 2906.572 kb on + strand, within HP15_2752 at 2906.782 kb on + strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.895 kb on - strand, within HP15_2752 at 2906.905 kb on - strand, within HP15_2752 at 2906.934 kb on + strand, within HP15_2752 at 2907.027 kb on + strand, within HP15_2752 at 2907.055 kb on - strand, within HP15_2752 at 2907.060 kb on + strand, within HP15_2752 at 2907.125 kb on + strand, within HP15_2752 at 2907.170 kb on + strand, within HP15_2752 at 2907.232 kb on + strand, within HP15_2752 at 2907.240 kb on - strand, within HP15_2752 at 2907.282 kb on - strand, within HP15_2752 at 2907.376 kb on - strand, within HP15_2752 at 2907.440 kb on - strand, within HP15_2752 at 2907.452 kb on + strand, within HP15_2752 at 2907.533 kb on - strand, within HP15_2752 at 2907.559 kb on + strand, within HP15_2752 at 2907.624 kb on - strand, within HP15_2752 at 2907.640 kb on + strand, within HP15_2752 at 2907.654 kb on - strand, within HP15_2752 at 2907.671 kb on + strand, within HP15_2752 at 2907.699 kb on + strand, within HP15_2752 at 2907.826 kb on - strand at 2907.893 kb on - strand at 2907.916 kb on + strand at 2907.924 kb on - strand at 2908.099 kb on - strand at 2908.108 kb on - strand at 2908.226 kb on + strand, within HP15_2753 at 2908.246 kb on + strand, within HP15_2753 at 2908.260 kb on + strand, within HP15_2753 at 2908.272 kb on + strand, within HP15_2753 at 2908.296 kb on - strand, within HP15_2753 at 2908.426 kb on - strand, within HP15_2753 at 2908.464 kb on + strand, within HP15_2753 at 2908.472 kb on - strand, within HP15_2753 at 2908.473 kb on - strand, within HP15_2753 at 2908.473 kb on - strand, within HP15_2753 at 2908.796 kb on + strand, within HP15_2753 at 2908.877 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,905,334 - HP15_2751 0.58 +0.3 2,905,452 + HP15_2751 0.65 -0.8 2,905,551 + HP15_2751 0.71 +0.4 2,905,556 + HP15_2751 0.72 -0.4 2,905,598 + HP15_2751 0.74 +0.1 2,905,604 + HP15_2751 0.74 +0.3 2,905,651 + HP15_2751 0.77 +0.4 2,905,762 + HP15_2751 0.84 +0.7 2,905,770 - HP15_2751 0.84 -0.1 2,905,781 + HP15_2751 0.85 +0.4 2,905,783 + HP15_2751 0.85 -0.0 2,905,795 + HP15_2751 0.86 +0.7 2,905,805 + HP15_2751 0.86 +0.1 2,905,856 - HP15_2751 0.89 +1.1 2,905,922 + -1.5 2,905,930 - -2.0 2,906,063 + -0.3 2,906,142 + -1.0 2,906,164 + +0.1 2,906,167 - -0.7 2,906,196 - +0.5 2,906,337 + HP15_2752 0.13 -0.5 2,906,393 + HP15_2752 0.16 -0.5 2,906,448 + HP15_2752 0.19 +1.7 2,906,493 - HP15_2752 0.21 +0.1 2,906,498 - HP15_2752 0.22 +0.1 2,906,498 - HP15_2752 0.22 -0.6 2,906,572 + HP15_2752 0.25 -0.8 2,906,782 + HP15_2752 0.37 +0.2 2,906,895 - HP15_2752 0.43 -2.0 2,906,895 - HP15_2752 0.43 -0.3 2,906,895 - HP15_2752 0.43 +0.2 2,906,895 - HP15_2752 0.43 -0.5 2,906,895 - HP15_2752 0.43 +0.7 2,906,895 - HP15_2752 0.43 -1.5 2,906,895 - HP15_2752 0.43 -0.5 2,906,905 - HP15_2752 0.43 -1.3 2,906,934 + HP15_2752 0.45 -0.2 2,907,027 + HP15_2752 0.50 -2.6 2,907,055 - HP15_2752 0.51 -0.0 2,907,060 + HP15_2752 0.51 +0.2 2,907,125 + HP15_2752 0.55 +2.2 2,907,170 + HP15_2752 0.57 -1.9 2,907,232 + HP15_2752 0.61 -0.3 2,907,240 - HP15_2752 0.61 -1.0 2,907,282 - HP15_2752 0.63 -0.5 2,907,376 - HP15_2752 0.68 -0.2 2,907,440 - HP15_2752 0.72 -0.2 2,907,452 + HP15_2752 0.72 +0.4 2,907,533 - HP15_2752 0.76 -0.7 2,907,559 + HP15_2752 0.78 -0.0 2,907,624 - HP15_2752 0.81 +0.2 2,907,640 + HP15_2752 0.82 -1.0 2,907,654 - HP15_2752 0.83 -0.5 2,907,671 + HP15_2752 0.84 +0.2 2,907,699 + HP15_2752 0.85 +0.9 2,907,826 - +1.3 2,907,893 - +1.0 2,907,916 + +0.3 2,907,924 - +0.7 2,908,099 - +0.5 2,908,108 - +2.3 2,908,226 + HP15_2753 0.21 +0.8 2,908,246 + HP15_2753 0.23 -0.0 2,908,260 + HP15_2753 0.25 +0.2 2,908,272 + HP15_2753 0.26 -0.2 2,908,296 - HP15_2753 0.29 -0.2 2,908,426 - HP15_2753 0.44 +0.7 2,908,464 + HP15_2753 0.49 -1.0 2,908,472 - HP15_2753 0.50 +0.4 2,908,473 - HP15_2753 0.50 -1.4 2,908,473 - HP15_2753 0.50 -0.2 2,908,796 + HP15_2753 0.87 +0.8 2,908,877 + -0.2
Or see this region's nucleotide sequence