Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2643 and HP15_2644 are separated by 17 nucleotides HP15_2644 and HP15_2645 are separated by 96 nucleotides HP15_2645 and HP15_2646 are separated by 85 nucleotides
HP15_2643: HP15_2643 - conserved hypothetical protein, at 2,792,779 to 2,793,444
_2643
HP15_2644: HP15_2644 - permease, at 2,793,462 to 2,794,238
_2644
HP15_2645: HP15_2645 - methyl-accepting chemotaxis protein, at 2,794,335 to 2,796,212
_2645
HP15_2646: HP15_2646 - radical SAM domain protein, at 2,796,298 to 2,797,359
_2646
Position (kb)
2794
2795
2796
2797 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2793.511 kb on + strand at 2793.615 kb on - strand, within HP15_2644 at 2793.671 kb on + strand, within HP15_2644 at 2793.679 kb on + strand, within HP15_2644 at 2793.734 kb on - strand, within HP15_2644 at 2793.734 kb on - strand, within HP15_2644 at 2793.747 kb on + strand, within HP15_2644 at 2793.802 kb on - strand, within HP15_2644 at 2793.870 kb on - strand, within HP15_2644 at 2794.049 kb on - strand, within HP15_2644 at 2794.181 kb on - strand at 2794.350 kb on + strand at 2794.389 kb on + strand at 2794.442 kb on - strand at 2794.485 kb on + strand at 2794.493 kb on - strand at 2794.613 kb on + strand, within HP15_2645 at 2794.677 kb on + strand, within HP15_2645 at 2794.702 kb on + strand, within HP15_2645 at 2794.734 kb on - strand, within HP15_2645 at 2794.776 kb on - strand, within HP15_2645 at 2794.959 kb on + strand, within HP15_2645 at 2795.129 kb on + strand, within HP15_2645 at 2795.185 kb on + strand, within HP15_2645 at 2795.250 kb on - strand, within HP15_2645 at 2795.250 kb on - strand, within HP15_2645 at 2795.287 kb on + strand, within HP15_2645 at 2795.484 kb on - strand, within HP15_2645 at 2795.535 kb on - strand, within HP15_2645 at 2795.562 kb on + strand, within HP15_2645 at 2795.570 kb on - strand, within HP15_2645 at 2795.644 kb on - strand, within HP15_2645 at 2795.726 kb on - strand, within HP15_2645 at 2795.928 kb on + strand, within HP15_2645 at 2795.943 kb on + strand, within HP15_2645 at 2796.053 kb on - strand at 2796.182 kb on + strand at 2796.186 kb on - strand at 2796.207 kb on + strand at 2796.219 kb on + strand at 2796.227 kb on - strand at 2796.243 kb on + strand at 2796.316 kb on + strand at 2796.345 kb on + strand at 2796.385 kb on - strand at 2796.489 kb on - strand, within HP15_2646 at 2796.545 kb on + strand, within HP15_2646 at 2796.645 kb on - strand, within HP15_2646 at 2796.649 kb on + strand, within HP15_2646 at 2796.806 kb on + strand, within HP15_2646 at 2796.840 kb on + strand, within HP15_2646 at 2796.840 kb on + strand, within HP15_2646 at 2796.848 kb on - strand, within HP15_2646 at 2796.876 kb on - strand, within HP15_2646 at 2796.927 kb on + strand, within HP15_2646 at 2796.945 kb on + strand, within HP15_2646 at 2797.139 kb on + strand, within HP15_2646 at 2797.147 kb on - strand, within HP15_2646 at 2797.187 kb on + strand, within HP15_2646
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,793,511 + -1.2 2,793,615 - HP15_2644 0.20 -1.0 2,793,671 + HP15_2644 0.27 +0.2 2,793,679 + HP15_2644 0.28 -1.3 2,793,734 - HP15_2644 0.35 +0.6 2,793,734 - HP15_2644 0.35 +0.0 2,793,747 + HP15_2644 0.37 +0.6 2,793,802 - HP15_2644 0.44 -0.1 2,793,870 - HP15_2644 0.53 -1.5 2,794,049 - HP15_2644 0.76 +0.3 2,794,181 - +0.2 2,794,350 + -1.1 2,794,389 + +0.1 2,794,442 - -1.0 2,794,485 + +0.1 2,794,493 - -1.2 2,794,613 + HP15_2645 0.15 +0.4 2,794,677 + HP15_2645 0.18 -0.3 2,794,702 + HP15_2645 0.20 -0.1 2,794,734 - HP15_2645 0.21 -2.9 2,794,776 - HP15_2645 0.23 -1.2 2,794,959 + HP15_2645 0.33 +0.6 2,795,129 + HP15_2645 0.42 +0.0 2,795,185 + HP15_2645 0.45 -0.7 2,795,250 - HP15_2645 0.49 +0.3 2,795,250 - HP15_2645 0.49 -0.1 2,795,287 + HP15_2645 0.51 -1.6 2,795,484 - HP15_2645 0.61 -0.0 2,795,535 - HP15_2645 0.64 -0.3 2,795,562 + HP15_2645 0.65 +0.2 2,795,570 - HP15_2645 0.66 +0.4 2,795,644 - HP15_2645 0.70 -0.6 2,795,726 - HP15_2645 0.74 -0.8 2,795,928 + HP15_2645 0.85 -0.1 2,795,943 + HP15_2645 0.86 +0.1 2,796,053 - +0.4 2,796,182 + -0.9 2,796,186 - -0.1 2,796,207 + -1.7 2,796,219 + -0.9 2,796,227 - +0.1 2,796,243 + -2.6 2,796,316 + -0.4 2,796,345 + +0.6 2,796,385 - +0.3 2,796,489 - HP15_2646 0.18 +0.3 2,796,545 + HP15_2646 0.23 +0.1 2,796,645 - HP15_2646 0.33 +0.4 2,796,649 + HP15_2646 0.33 -2.1 2,796,806 + HP15_2646 0.48 +0.8 2,796,840 + HP15_2646 0.51 +0.8 2,796,840 + HP15_2646 0.51 +0.0 2,796,848 - HP15_2646 0.52 +0.7 2,796,876 - HP15_2646 0.54 -0.7 2,796,927 + HP15_2646 0.59 +1.9 2,796,945 + HP15_2646 0.61 -0.0 2,797,139 + HP15_2646 0.79 -0.4 2,797,147 - HP15_2646 0.80 -1.1 2,797,187 + HP15_2646 0.84 +0.6
Or see this region's nucleotide sequence