Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2436 and HP15_2437 are separated by 188 nucleotides HP15_2437 and HP15_2438 overlap by 1 nucleotides HP15_2438 and HP15_2439 overlap by 4 nucleotides
HP15_2435: HP15_2435 - ABC-type transport system involved in resistance to organic solvents, permease component, at 2,574,588 to 2,575,370
_2435
HP15_2436: HP15_2436 - toluene tolerance ABC efflux transporter, ATP-binding protein, at 2,575,367 to 2,576,179
_2436
HP15_2437: HP15_2437 - KpsF/GutQ family protein, at 2,576,368 to 2,577,347
_2437
HP15_2438: HP15_2438 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family, at 2,577,347 to 2,577,919
_2438
HP15_2439: HP15_2439 - protein containing DUF1239, at 2,577,916 to 2,578,500
_2439
Position (kb)
2576
2577
2578 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2575.377 kb on + strand at 2575.495 kb on + strand, within HP15_2436 at 2575.500 kb on + strand, within HP15_2436 at 2575.503 kb on - strand, within HP15_2436 at 2575.603 kb on - strand, within HP15_2436 at 2575.613 kb on + strand, within HP15_2436 at 2575.629 kb on + strand, within HP15_2436 at 2575.718 kb on + strand, within HP15_2436 at 2575.721 kb on - strand, within HP15_2436 at 2575.786 kb on + strand, within HP15_2436 at 2575.910 kb on + strand, within HP15_2436 at 2575.943 kb on + strand, within HP15_2436 at 2575.951 kb on - strand, within HP15_2436 at 2575.987 kb on + strand, within HP15_2436 at 2576.007 kb on + strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.073 kb on - strand, within HP15_2436 at 2576.210 kb on + strand at 2576.260 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,575,377 + -2.6 2,575,495 + HP15_2436 0.16 -3.5 2,575,500 + HP15_2436 0.16 -3.4 2,575,503 - HP15_2436 0.17 -4.3 2,575,603 - HP15_2436 0.29 -0.9 2,575,613 + HP15_2436 0.30 -5.4 2,575,629 + HP15_2436 0.32 -3.7 2,575,718 + HP15_2436 0.43 -1.9 2,575,721 - HP15_2436 0.44 -3.3 2,575,786 + HP15_2436 0.52 -1.9 2,575,910 + HP15_2436 0.67 -3.4 2,575,943 + HP15_2436 0.71 -2.3 2,575,951 - HP15_2436 0.72 -5.7 2,575,987 + HP15_2436 0.76 -2.4 2,576,007 + HP15_2436 0.79 -3.4 2,576,073 - HP15_2436 0.87 -1.9 2,576,073 - HP15_2436 0.87 -4.4 2,576,210 + -1.9 2,576,260 + -0.7
Or see this region's nucleotide sequence