Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2380 and HP15_2381 are separated by 43 nucleotides HP15_2381 and HP15_2382 are separated by 73 nucleotides
HP15_2380: HP15_2380 - metallo-beta-lactamase family protein, at 2,508,515 to 2,509,906
_2380
HP15_2381: HP15_2381 - UDP-glucose 6-dehydrogenase, at 2,509,950 to 2,511,143
_2381
HP15_2382: HP15_2382 - UDP-N-acetylglucosamine 2-epimerase, at 2,511,217 to 2,512,350
_2382
Position (kb)
2509
2510
2511
2512 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2509.007 kb on - strand, within HP15_2380 at 2509.009 kb on + strand, within HP15_2380 at 2509.119 kb on - strand, within HP15_2380 at 2509.185 kb on + strand, within HP15_2380 at 2509.187 kb on + strand, within HP15_2380 at 2509.195 kb on - strand, within HP15_2380 at 2509.207 kb on + strand, within HP15_2380 at 2509.220 kb on + strand, within HP15_2380 at 2509.231 kb on + strand, within HP15_2380 at 2509.327 kb on - strand, within HP15_2380 at 2509.396 kb on - strand, within HP15_2380 at 2509.432 kb on + strand, within HP15_2380 at 2509.432 kb on + strand, within HP15_2380 at 2509.440 kb on - strand, within HP15_2380 at 2509.446 kb on + strand, within HP15_2380 at 2509.454 kb on - strand, within HP15_2380 at 2509.470 kb on + strand, within HP15_2380 at 2509.504 kb on - strand, within HP15_2380 at 2509.591 kb on - strand, within HP15_2380 at 2509.596 kb on + strand, within HP15_2380 at 2509.649 kb on + strand, within HP15_2380 at 2509.657 kb on - strand, within HP15_2380 at 2509.788 kb on + strand at 2509.878 kb on - strand at 2509.975 kb on + strand at 2509.975 kb on + strand at 2509.985 kb on + strand at 2509.985 kb on + strand at 2510.007 kb on - strand at 2510.070 kb on - strand, within HP15_2381 at 2510.166 kb on + strand, within HP15_2381 at 2510.174 kb on - strand, within HP15_2381 at 2510.174 kb on - strand, within HP15_2381 at 2510.287 kb on + strand, within HP15_2381 at 2510.287 kb on + strand, within HP15_2381 at 2510.287 kb on + strand, within HP15_2381 at 2510.295 kb on - strand, within HP15_2381 at 2510.295 kb on - strand, within HP15_2381 at 2510.295 kb on - strand, within HP15_2381 at 2510.295 kb on - strand, within HP15_2381 at 2510.300 kb on + strand, within HP15_2381 at 2510.307 kb on - strand, within HP15_2381 at 2510.366 kb on - strand, within HP15_2381 at 2510.378 kb on + strand, within HP15_2381 at 2510.378 kb on + strand, within HP15_2381 at 2510.445 kb on - strand, within HP15_2381 at 2510.573 kb on + strand, within HP15_2381 at 2510.573 kb on + strand, within HP15_2381 at 2510.581 kb on - strand, within HP15_2381 at 2510.590 kb on + strand, within HP15_2381 at 2510.600 kb on - strand, within HP15_2381 at 2510.665 kb on + strand, within HP15_2381 at 2510.721 kb on - strand, within HP15_2381 at 2510.783 kb on + strand, within HP15_2381 at 2510.826 kb on + strand, within HP15_2381 at 2510.827 kb on - strand, within HP15_2381 at 2510.921 kb on - strand, within HP15_2381 at 2510.976 kb on + strand, within HP15_2381 at 2511.086 kb on - strand at 2511.205 kb on + strand at 2511.213 kb on - strand at 2511.213 kb on - strand at 2511.568 kb on - strand, within HP15_2382 at 2511.583 kb on + strand, within HP15_2382 at 2511.626 kb on - strand, within HP15_2382 at 2511.626 kb on - strand, within HP15_2382 at 2511.629 kb on + strand, within HP15_2382 at 2511.848 kb on - strand, within HP15_2382
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,509,007 - HP15_2380 0.35 +0.1 2,509,009 + HP15_2380 0.35 -1.3 2,509,119 - HP15_2380 0.43 +0.4 2,509,185 + HP15_2380 0.48 +1.0 2,509,187 + HP15_2380 0.48 -0.3 2,509,195 - HP15_2380 0.49 -0.2 2,509,207 + HP15_2380 0.50 +0.7 2,509,220 + HP15_2380 0.51 -2.4 2,509,231 + HP15_2380 0.51 -0.3 2,509,327 - HP15_2380 0.58 +0.4 2,509,396 - HP15_2380 0.63 +0.7 2,509,432 + HP15_2380 0.66 -2.3 2,509,432 + HP15_2380 0.66 -0.3 2,509,440 - HP15_2380 0.66 +0.3 2,509,446 + HP15_2380 0.67 +0.3 2,509,454 - HP15_2380 0.67 +0.8 2,509,470 + HP15_2380 0.69 +1.1 2,509,504 - HP15_2380 0.71 +0.0 2,509,591 - HP15_2380 0.77 +0.0 2,509,596 + HP15_2380 0.78 +0.3 2,509,649 + HP15_2380 0.81 -0.3 2,509,657 - HP15_2380 0.82 -0.7 2,509,788 + +0.2 2,509,878 - +0.2 2,509,975 + -1.5 2,509,975 + +0.8 2,509,985 + +2.0 2,509,985 + +0.2 2,510,007 - +0.4 2,510,070 - HP15_2381 0.10 -0.5 2,510,166 + HP15_2381 0.18 -0.1 2,510,174 - HP15_2381 0.19 +0.3 2,510,174 - HP15_2381 0.19 -0.1 2,510,287 + HP15_2381 0.28 -1.0 2,510,287 + HP15_2381 0.28 -0.5 2,510,287 + HP15_2381 0.28 -0.6 2,510,295 - HP15_2381 0.29 +0.2 2,510,295 - HP15_2381 0.29 +0.4 2,510,295 - HP15_2381 0.29 +0.8 2,510,295 - HP15_2381 0.29 +0.0 2,510,300 + HP15_2381 0.29 -3.9 2,510,307 - HP15_2381 0.30 +0.9 2,510,366 - HP15_2381 0.35 -0.7 2,510,378 + HP15_2381 0.36 +0.4 2,510,378 + HP15_2381 0.36 +0.7 2,510,445 - HP15_2381 0.41 -0.1 2,510,573 + HP15_2381 0.52 +0.9 2,510,573 + HP15_2381 0.52 -0.7 2,510,581 - HP15_2381 0.53 +0.1 2,510,590 + HP15_2381 0.54 +0.1 2,510,600 - HP15_2381 0.54 +1.6 2,510,665 + HP15_2381 0.60 +0.7 2,510,721 - HP15_2381 0.65 +0.5 2,510,783 + HP15_2381 0.70 +0.0 2,510,826 + HP15_2381 0.73 -0.2 2,510,827 - HP15_2381 0.73 -0.0 2,510,921 - HP15_2381 0.81 -0.3 2,510,976 + HP15_2381 0.86 +0.7 2,511,086 - +0.7 2,511,205 + +1.0 2,511,213 - -0.9 2,511,213 - -0.3 2,511,568 - HP15_2382 0.31 -0.0 2,511,583 + HP15_2382 0.32 +0.1 2,511,626 - HP15_2382 0.36 -1.1 2,511,626 - HP15_2382 0.36 -2.7 2,511,629 + HP15_2382 0.36 +0.0 2,511,848 - HP15_2382 0.56 -0.6
Or see this region's nucleotide sequence