Strain Fitness in Marinobacter adhaerens HP15 around HP15_2353

Experiment: m.b. Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2352 and HP15_2353 are separated by 22 nucleotidesHP15_2353 and HP15_2354 are separated by 11 nucleotides HP15_2352: HP15_2352 - sensory box sensor/GGDEF/EAL domain protein, at 2,475,487 to 2,477,547 _2352 HP15_2353: HP15_2353 - LemA family protein, at 2,477,570 to 2,478,157 _2353 HP15_2354: HP15_2354 - peptidase M48, Ste24p, at 2,478,169 to 2,480,166 _2354 Position (kb) 2477 2478 2479Strain fitness (log2 ratio) -2 -1 0 1at 2476.588 kb on + strand, within HP15_2352at 2476.612 kb on + strand, within HP15_2352at 2476.615 kb on - strand, within HP15_2352at 2476.615 kb on - strand, within HP15_2352at 2476.644 kb on + strand, within HP15_2352at 2476.670 kb on - strand, within HP15_2352at 2476.688 kb on - strand, within HP15_2352at 2476.859 kb on + strand, within HP15_2352at 2476.859 kb on + strand, within HP15_2352at 2476.969 kb on + strand, within HP15_2352at 2476.977 kb on - strand, within HP15_2352at 2477.048 kb on + strand, within HP15_2352at 2477.048 kb on - strand, within HP15_2352at 2477.117 kb on - strand, within HP15_2352at 2477.136 kb on - strand, within HP15_2352at 2477.151 kb on - strand, within HP15_2352at 2477.248 kb on + strand, within HP15_2352at 2477.371 kb on + strandat 2477.380 kb on - strandat 2477.380 kb on - strandat 2477.564 kb on - strandat 2477.564 kb on - strandat 2477.564 kb on - strandat 2477.638 kb on - strand, within HP15_2353at 2477.769 kb on + strand, within HP15_2353at 2477.866 kb on - strand, within HP15_2353at 2477.962 kb on + strand, within HP15_2353at 2478.010 kb on + strand, within HP15_2353at 2478.033 kb on + strand, within HP15_2353at 2478.207 kb on - strandat 2478.210 kb on + strandat 2478.215 kb on + strandat 2478.322 kb on - strandat 2478.415 kb on - strand, within HP15_2354at 2479.008 kb on + strand, within HP15_2354at 2479.118 kb on + strand, within HP15_2354at 2479.128 kb on + strand, within HP15_2354at 2479.151 kb on - strand, within HP15_2354

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM
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2,476,588 + HP15_2352 0.53 -0.4
2,476,612 + HP15_2352 0.55 +0.8
2,476,615 - HP15_2352 0.55 +1.1
2,476,615 - HP15_2352 0.55 +0.3
2,476,644 + HP15_2352 0.56 +0.2
2,476,670 - HP15_2352 0.57 +0.6
2,476,688 - HP15_2352 0.58 -0.3
2,476,859 + HP15_2352 0.67 +0.1
2,476,859 + HP15_2352 0.67 +0.0
2,476,969 + HP15_2352 0.72 -0.2
2,476,977 - HP15_2352 0.72 +0.1
2,477,048 + HP15_2352 0.76 -0.7
2,477,048 - HP15_2352 0.76 +1.0
2,477,117 - HP15_2352 0.79 -0.9
2,477,136 - HP15_2352 0.80 -0.5
2,477,151 - HP15_2352 0.81 +1.0
2,477,248 + HP15_2352 0.85 +0.3
2,477,371 + +0.9
2,477,380 - +0.8
2,477,380 - -0.1
2,477,564 - -0.0
2,477,564 - -0.3
2,477,564 - -0.7
2,477,638 - HP15_2353 0.12 +1.1
2,477,769 + HP15_2353 0.34 +1.7
2,477,866 - HP15_2353 0.50 +0.3
2,477,962 + HP15_2353 0.67 +0.1
2,478,010 + HP15_2353 0.75 -1.7
2,478,033 + HP15_2353 0.79 +1.2
2,478,207 - +0.1
2,478,210 + -1.6
2,478,215 + -0.0
2,478,322 - -2.1
2,478,415 - HP15_2354 0.12 -0.5
2,479,008 + HP15_2354 0.42 -0.4
2,479,118 + HP15_2354 0.47 -0.8
2,479,128 + HP15_2354 0.48 -1.0
2,479,151 - HP15_2354 0.49 +0.5

Or see this region's nucleotide sequence