Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2151 and HP15_2152 are separated by 21 nucleotides HP15_2152 and HP15_2153 are separated by 329 nucleotides
HP15_2151: HP15_2151 - conserved hypothetical protein, at 2,255,198 to 2,256,757
_2151
HP15_2152: HP15_2152 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 2,256,779 to 2,257,744
_2152
HP15_2153: HP15_2153 - extracellular ligand-binding receptor, at 2,258,074 to 2,259,323
_2153
Position (kb)
2256
2257
2258 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2255.804 kb on - strand, within HP15_2151 at 2255.859 kb on + strand, within HP15_2151 at 2255.978 kb on - strand, within HP15_2151 at 2256.007 kb on + strand, within HP15_2151 at 2256.278 kb on + strand, within HP15_2151 at 2256.322 kb on + strand, within HP15_2151 at 2256.435 kb on + strand, within HP15_2151 at 2256.467 kb on - strand, within HP15_2151 at 2256.549 kb on + strand, within HP15_2151 at 2256.582 kb on - strand, within HP15_2151 at 2256.607 kb on + strand at 2256.701 kb on + strand at 2256.701 kb on + strand at 2256.701 kb on + strand at 2256.701 kb on + strand at 2256.709 kb on - strand at 2256.709 kb on - strand at 2256.709 kb on - strand at 2256.709 kb on - strand at 2256.781 kb on + strand at 2256.796 kb on + strand at 2256.804 kb on - strand at 2256.804 kb on - strand at 2256.804 kb on - strand at 2256.807 kb on + strand at 2256.841 kb on + strand at 2257.242 kb on + strand, within HP15_2152 at 2257.247 kb on + strand, within HP15_2152 at 2257.265 kb on - strand, within HP15_2152 at 2257.268 kb on - strand, within HP15_2152 at 2257.414 kb on - strand, within HP15_2152 at 2257.418 kb on + strand, within HP15_2152 at 2257.504 kb on + strand, within HP15_2152 at 2257.704 kb on - strand at 2257.783 kb on + strand at 2257.829 kb on + strand at 2257.903 kb on + strand at 2258.123 kb on + strand at 2258.126 kb on + strand at 2258.188 kb on + strand at 2258.312 kb on - strand, within HP15_2153 at 2258.369 kb on - strand, within HP15_2153 at 2258.524 kb on - strand, within HP15_2153 at 2258.531 kb on + strand, within HP15_2153 at 2258.535 kb on + strand, within HP15_2153 at 2258.605 kb on + strand, within HP15_2153
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,255,804 - HP15_2151 0.39 +0.1 2,255,859 + HP15_2151 0.42 +0.7 2,255,978 - HP15_2151 0.50 -0.1 2,256,007 + HP15_2151 0.52 +0.6 2,256,278 + HP15_2151 0.69 -0.3 2,256,322 + HP15_2151 0.72 -0.1 2,256,435 + HP15_2151 0.79 +0.6 2,256,467 - HP15_2151 0.81 -0.8 2,256,549 + HP15_2151 0.87 +0.1 2,256,582 - HP15_2151 0.89 -1.2 2,256,607 + +0.3 2,256,701 + +0.2 2,256,701 + +0.0 2,256,701 + -1.7 2,256,701 + -0.6 2,256,709 - -0.5 2,256,709 - +1.2 2,256,709 - +0.7 2,256,709 - -1.4 2,256,781 + -0.6 2,256,796 + +0.2 2,256,804 - +0.6 2,256,804 - +0.2 2,256,804 - -0.5 2,256,807 + +0.1 2,256,841 + -2.0 2,257,242 + HP15_2152 0.48 -0.3 2,257,247 + HP15_2152 0.48 -1.4 2,257,265 - HP15_2152 0.50 -0.2 2,257,268 - HP15_2152 0.51 -3.8 2,257,414 - HP15_2152 0.66 -3.1 2,257,418 + HP15_2152 0.66 -2.5 2,257,504 + HP15_2152 0.75 -0.4 2,257,704 - +0.6 2,257,783 + -3.5 2,257,829 + -1.0 2,257,903 + +0.2 2,258,123 + +0.1 2,258,126 + -0.7 2,258,188 + -0.0 2,258,312 - HP15_2153 0.19 +0.4 2,258,369 - HP15_2153 0.24 -0.3 2,258,524 - HP15_2153 0.36 -0.0 2,258,531 + HP15_2153 0.37 -0.2 2,258,535 + HP15_2153 0.37 +2.4 2,258,605 + HP15_2153 0.42 -1.8
Or see this region's nucleotide sequence