Experiment: m.b. Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2021 and HP15_2022 are separated by 277 nucleotides HP15_2022 and HP15_2023 are separated by 60 nucleotides HP15_2023 and HP15_2024 are separated by 28 nucleotides HP15_2024 and HP15_2025 are separated by 32 nucleotides
HP15_2021: HP15_2021 - membrane protein containing DUF606, at 2,122,791 to 2,123,255
_2021
HP15_2022: HP15_2022 - lipocalin family protein, at 2,123,533 to 2,124,072
_2022
HP15_2023: HP15_2023 - UDP-glucuronic acid epimerase, at 2,124,133 to 2,125,140
_2023
HP15_2024: HP15_2024 - conserved hypothetical protein, secreted, at 2,125,169 to 2,125,906
_2024
HP15_2025: HP15_2025 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2,125,939 to 2,126,652
_2025
Position (kb)
2124
2125
2126 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2123.191 kb on + strand, within HP15_2021 at 2123.243 kb on - strand at 2123.251 kb on + strand at 2123.369 kb on + strand at 2123.431 kb on + strand at 2123.621 kb on - strand, within HP15_2022 at 2123.634 kb on + strand, within HP15_2022 at 2123.642 kb on - strand, within HP15_2022 at 2123.647 kb on - strand, within HP15_2022 at 2123.671 kb on + strand, within HP15_2022 at 2123.679 kb on - strand, within HP15_2022 at 2123.679 kb on - strand, within HP15_2022 at 2123.776 kb on + strand, within HP15_2022 at 2123.837 kb on + strand, within HP15_2022 at 2123.881 kb on + strand, within HP15_2022 at 2123.889 kb on - strand, within HP15_2022 at 2123.988 kb on + strand, within HP15_2022 at 2125.463 kb on - strand, within HP15_2024 at 2125.512 kb on - strand, within HP15_2024 at 2125.667 kb on - strand, within HP15_2024 at 2125.704 kb on + strand, within HP15_2024 at 2125.843 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.025 mM remove 2,123,191 + HP15_2021 0.86 +0.2 2,123,243 - +0.9 2,123,251 + -0.6 2,123,369 + -1.0 2,123,431 + -0.5 2,123,621 - HP15_2022 0.16 -0.4 2,123,634 + HP15_2022 0.19 -0.0 2,123,642 - HP15_2022 0.20 -1.4 2,123,647 - HP15_2022 0.21 +0.1 2,123,671 + HP15_2022 0.26 -0.4 2,123,679 - HP15_2022 0.27 -0.1 2,123,679 - HP15_2022 0.27 +0.4 2,123,776 + HP15_2022 0.45 +0.2 2,123,837 + HP15_2022 0.56 -0.6 2,123,881 + HP15_2022 0.64 -0.0 2,123,889 - HP15_2022 0.66 +0.1 2,123,988 + HP15_2022 0.84 -1.1 2,125,463 - HP15_2024 0.40 -0.6 2,125,512 - HP15_2024 0.46 -1.0 2,125,667 - HP15_2024 0.67 +0.2 2,125,704 + HP15_2024 0.72 -4.9 2,125,843 - -1.0
Or see this region's nucleotide sequence