Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02883

Experiment: PYE_noCalcium 30C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 12 days
3,030,091	+		CCNA_02881	0.77	-0.2
3,030,091	+		CCNA_02881	0.77	-0.1
3,030,094	-		CCNA_02881	0.77	+0.1
3,030,099	-		CCNA_02881	0.77	-1.2
3,030,132	-		CCNA_02881	0.80	+1.1
3,030,133	+		CCNA_02881	0.80	-0.1
3,030,141	-		CCNA_02881	0.80	-0.3
3,030,156	+		CCNA_02881	0.81	+0.3
3,030,158	-		CCNA_02881	0.81	-1.4
3,030,197	-		CCNA_02881	0.84	+0.9
3,030,215	+		CCNA_02881	0.85	+0.2
3,030,245	+		CCNA_02881	0.87	-2.3
3,030,253	-		CCNA_02881	0.87	+0.2
3,030,256	+		CCNA_02881	0.87	+0.2
3,030,268	+		CCNA_02881	0.88	-0.4
3,030,318	-				-0.5
3,030,347	-				+1.9
3,030,377	-				-0.1
3,030,377	-				+0.7
3,030,393	+				+0.9
3,030,401	-				-2.0
3,030,401	-				-1.7
3,030,455	+				+0.1
3,030,464	-				-1.2
3,030,492	-				-0.9
3,030,613	-				-0.5
3,030,672	-				+0.1
3,030,726	-		CCNA_02882	0.15	-0.7
3,030,738	-		CCNA_02882	0.18	+0.4
3,030,758	-		CCNA_02882	0.23	-1.0
3,030,864	-		CCNA_02882	0.49	-1.9
3,030,885	+		CCNA_02882	0.54	-1.4
3,030,921	-		CCNA_02882	0.63	-0.2
3,030,944	-		CCNA_02882	0.69	+1.5
3,030,952	+		CCNA_02882	0.71	-0.3
3,030,952	+		CCNA_02882	0.71	-2.1
3,030,952	+		CCNA_02882	0.71	+1.5
3,030,960	-		CCNA_02882	0.73	+2.1
3,030,960	-		CCNA_02882	0.73	-0.7
3,030,960	-		CCNA_02882	0.73	+0.2
3,030,960	-		CCNA_02882	0.73	-1.8
3,030,960	-		CCNA_02882	0.73	-1.9
3,031,008	+		CCNA_02882	0.85	+0.9
3,031,008	+		CCNA_02882	0.85	+2.5
3,031,008	+		CCNA_02882	0.85	+0.5
3,031,015	-		CCNA_02882	0.87	-0.7
3,031,016	-		CCNA_02882	0.87	+0.3
3,031,016	-		CCNA_02882	0.87	-0.1
3,031,016	-		CCNA_02882	0.87	+0.2
3,031,016	-		CCNA_02882	0.87	-1.7
3,031,016	-		CCNA_02882	0.87	-0.5
3,031,016	-		CCNA_02882	0.87	-0.7
3,031,028	-				+0.2
3,031,032	+				-1.2
3,031,053	-				+2.2
3,031,075	-				-1.8
3,031,093	+				+0.8
3,031,133	+				-1.3
3,031,152	-				-0.9
3,031,155	-				+1.8
3,031,162	+				-1.4
3,031,181	+				-0.3
3,031,181	+				+3.5
3,031,207	-				-0.8
3,031,215	+				+1.5
3,031,221	-				+0.4
3,031,221	-				-0.3
3,031,221	-				-1.2
3,031,226	-				+1.8
3,031,257	+		CCNA_02883	0.11	+1.7
3,031,270	-		CCNA_02883	0.12	+0.9
3,031,270	-		CCNA_02883	0.12	+0.5
3,031,305	+		CCNA_02883	0.14	+0.6
3,031,305	+		CCNA_02883	0.14	+0.2
3,031,313	-		CCNA_02883	0.14	+0.5
3,031,339	+		CCNA_02883	0.16	+0.8
3,031,371	-		CCNA_02883	0.18	+1.0
3,031,396	+		CCNA_02883	0.19	+1.5
3,031,396	+		CCNA_02883	0.19	-1.1
3,031,418	+		CCNA_02883	0.21	-1.3
3,031,438	-		CCNA_02883	0.22	+1.7
3,031,446	-		CCNA_02883	0.22	+1.5
3,031,446	-		CCNA_02883	0.22	+0.5
3,031,457	-		CCNA_02883	0.23	+0.5
3,031,508	-		CCNA_02883	0.26	+0.9
3,031,508	-		CCNA_02883	0.26	+0.4
3,031,523	-		CCNA_02883	0.27	-0.5
3,031,550	+		CCNA_02883	0.29	+1.5
3,031,556	+		CCNA_02883	0.29	+0.2
3,031,563	-		CCNA_02883	0.30	+0.2
3,031,564	-		CCNA_02883	0.30	-0.7
3,031,566	+		CCNA_02883	0.30	+0.2
3,031,566	+		CCNA_02883	0.30	-0.9
3,031,566	+		CCNA_02883	0.30	+1.5
3,031,569	-		CCNA_02883	0.30	+0.2
3,031,571	+		CCNA_02883	0.30	+0.1
3,031,571	+		CCNA_02883	0.30	+0.0
3,031,574	-		CCNA_02883	0.30	-1.4
3,031,574	-		CCNA_02883	0.30	+0.9
3,031,593	+		CCNA_02883	0.31	+1.3
3,031,619	+		CCNA_02883	0.33	+0.9
3,031,680	+		CCNA_02883	0.37	-0.5
3,031,680	+		CCNA_02883	0.37	-0.1
3,031,688	-		CCNA_02883	0.37	+2.5
3,031,688	-		CCNA_02883	0.37	-0.1
3,031,727	+		CCNA_02883	0.40	-1.5
3,031,772	+		CCNA_02883	0.42	-1.1
3,031,785	+		CCNA_02883	0.43	-2.7
3,031,827	-		CCNA_02883	0.46	+0.9
3,031,850	+		CCNA_02883	0.47	-0.9
3,031,853	-		CCNA_02883	0.47	-0.1
3,031,887	+		CCNA_02883	0.50	+1.5
3,031,887	+		CCNA_02883	0.50	-0.7
3,031,887	+		CCNA_02883	0.50	+0.5
3,031,887	+		CCNA_02883	0.50	+0.9
3,031,895	-		CCNA_02883	0.50	-0.8
3,031,901	+		CCNA_02883	0.50	+0.9
3,031,909	-		CCNA_02883	0.51	-1.2
3,031,920	+		CCNA_02883	0.52	+2.5
3,031,920	+		CCNA_02883	0.52	-0.5
3,031,920	+		CCNA_02883	0.52	+0.8
3,031,920	+		CCNA_02883	0.52	-0.9
3,031,920	+		CCNA_02883	0.52	+0.5
3,031,920	+		CCNA_02883	0.52	+0.5
3,031,922	+		CCNA_02883	0.52	+0.5
3,031,926	-		CCNA_02883	0.52	+0.2
3,031,928	-		CCNA_02883	0.52	-1.3
3,031,928	-		CCNA_02883	0.52	+0.9
3,031,928	-		CCNA_02883	0.52	+0.8
3,032,019	+		CCNA_02883	0.58	+0.2
3,032,027	-		CCNA_02883	0.58	+0.6
3,032,027	-		CCNA_02883	0.58	+0.7
3,032,027	-		CCNA_02883	0.58	+0.2
3,032,027	-		CCNA_02883	0.58	-0.2
3,032,048	-		CCNA_02883	0.59	+0.8
3,032,048	-		CCNA_02883	0.59	-0.1
3,032,055	+		CCNA_02883	0.60	-0.2
3,032,056	-		CCNA_02883	0.60	+0.8
3,032,077	+		CCNA_02883	0.61	+1.0
3,032,077	+		CCNA_02883	0.61	-0.6
3,032,077	+		CCNA_02883	0.61	+0.8
3,032,077	+		CCNA_02883	0.61	-0.9
3,032,077	+		CCNA_02883	0.61	+0.8
3,032,085	-		CCNA_02883	0.62	+2.1
3,032,085	-		CCNA_02883	0.62	-0.5
3,032,085	-		CCNA_02883	0.62	-0.5
3,032,091	+		CCNA_02883	0.62	-0.5
3,032,096	+		CCNA_02883	0.62	-1.6
3,032,096	+		CCNA_02883	0.62	-0.2
3,032,103	+		CCNA_02883	0.63	-1.5
3,032,103	+		CCNA_02883	0.63	+0.2
3,032,103	+		CCNA_02883	0.63	+1.0
3,032,104	-		CCNA_02883	0.63	+1.5
3,032,116	-		CCNA_02883	0.64	-0.1
3,032,195	+		CCNA_02883	0.68	+0.6
3,032,195	+		CCNA_02883	0.68	+0.9
3,032,203	-		CCNA_02883	0.69	-1.7
3,032,218	-		CCNA_02883	0.70	+0.9
3,032,263	+		CCNA_02883	0.73	+0.2
3,032,263	+		CCNA_02883	0.73	-1.1
3,032,263	+		CCNA_02883	0.73	+1.3
3,032,271	-		CCNA_02883	0.73	-0.5
3,032,271	-		CCNA_02883	0.73	-0.5
3,032,271	-		CCNA_02883	0.73	+1.9
3,032,273	+		CCNA_02883	0.73	+0.2
3,032,291	-		CCNA_02883	0.74	-0.3
3,032,293	+		CCNA_02883	0.74	+0.5
3,032,293	+		CCNA_02883	0.74	-0.3
3,032,361	-		CCNA_02883	0.79	-0.8
3,032,361	-		CCNA_02883	0.79	-0.7
3,032,366	-		CCNA_02883	0.79	+3.5
3,032,366	-		CCNA_02883	0.79	+0.3
3,032,371	-		CCNA_02883	0.79	-0.1
3,032,376	-		CCNA_02883	0.80	+0.2
3,032,435	+		CCNA_02883	0.83	-0.8
3,032,435	+		CCNA_02883	0.83	+0.3
3,032,443	-		CCNA_02883	0.84	-2.2
3,032,462	-		CCNA_02883	0.85	-0.8
3,032,462	-		CCNA_02883	0.85	-1.4
3,032,548	+				-0.7
3,032,596	+				-1.7
3,032,656	+				-0.9
3,032,702	+				-0.7
3,032,710	-				-1.2
3,032,710	-				-1.2
3,032,812	+				+0.0
3,032,812	+				-1.5
3,032,812	+				-1.8
3,032,820	-				-0.3
3,032,820	-				-1.2
3,032,856	+				-0.5
3,032,866	-				-1.2
3,032,866	-				+0.2
3,032,873	+				-1.6
3,032,873	+				-0.7
3,032,878	+				-1.6
3,032,878	+				+0.2
3,032,878	+				+3.5
3,032,886	-				-0.4
3,032,886	-				+1.5
3,032,973	+		CCNA_02884	0.15	+0.7
3,032,978	+		CCNA_02884	0.16	-1.9
3,032,978	+		CCNA_02884	0.16	-1.5
3,032,978	+		CCNA_02884	0.16	+1.2
3,032,981	-		CCNA_02884	0.16	-1.3
3,032,991	-		CCNA_02884	0.18	-0.2
3,033,041	-		CCNA_02884	0.24	-0.3
3,033,083	-		CCNA_02884	0.30	+0.1
3,033,106	+		CCNA_02884	0.33	-1.0
3,033,111	+		CCNA_02884	0.33	-0.5
3,033,111	+		CCNA_02884	0.33	+0.1
3,033,111	+		CCNA_02884	0.33	-0.4
3,033,119	-		CCNA_02884	0.34	-0.9
3,033,119	-		CCNA_02884	0.34	+1.2
3,033,119	-		CCNA_02884	0.34	-1.8
3,033,119	-		CCNA_02884	0.34	-2.0
3,033,119	-		CCNA_02884	0.34	+0.5
3,033,119	-		CCNA_02884	0.34	-1.3
3,033,215	+		CCNA_02884	0.47	+2.1
3,033,224	-		CCNA_02884	0.48	-0.1
3,033,228	+		CCNA_02884	0.49	-0.3
3,033,246	-				-0.1
3,033,256	-		CCNA_02884	0.52	+1.5
3,033,281	+		CCNA_02884	0.55	-0.3
3,033,281	+		CCNA_02884	0.55	-0.2
3,033,281	+		CCNA_02884	0.55	-0.8
3,033,299	-		CCNA_02884	0.58	-1.2
3,033,303	-		CCNA_02884	0.58	+0.7
3,033,324	-		CCNA_02884	0.61	-0.5
3,033,338	-		CCNA_02884	0.63	-1.1
3,033,395	-		CCNA_02884	0.70	-1.3
3,033,395	-		CCNA_02884	0.70	-0.5
3,033,396	+		CCNA_02884	0.70	+0.2
3,033,417	+		CCNA_02884	0.73	-0.5
3,033,425	-		CCNA_02884	0.74	+1.0
3,033,425	-		CCNA_02884	0.74	-1.1
3,033,425	-		CCNA_02884	0.74	-1.1
3,033,425	-		CCNA_02884	0.74	+0.5
3,033,425	-		CCNA_02884	0.74	+1.1
3,033,425	-		CCNA_02884	0.74	+0.9
3,033,533	-		CCNA_02884	0.88	-0.8
3,033,625	-				-0.9
3,033,640	-				-0.2
3,033,640	-				+0.3
3,033,651	+				+0.1
3,033,651	+				+0.2