Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19780 and BWI76_RS19785 are separated by 9 nucleotides BWI76_RS19785 and BWI76_RS19790 overlap by 1 nucleotides
BWI76_RS19780: BWI76_RS19780 - antibiotic ABC transporter substrate-binding protein, at 4,135,688 to 4,137,493
_RS19780
BWI76_RS19785: BWI76_RS19785 - microcin C ABC transporter permease YejB, at 4,137,503 to 4,138,597
_RS19785
BWI76_RS19790: BWI76_RS19790 - putative binding-protein-dependent transporter, at 4,138,597 to 4,139,622
_RS19790
Position (kb)
4137
4138
4139 Strain fitness (log2 ratio)
-1
0
1 at 4136.674 kb on - strand, within BWI76_RS19780 at 4136.725 kb on - strand, within BWI76_RS19780 at 4136.808 kb on - strand, within BWI76_RS19780 at 4136.853 kb on - strand, within BWI76_RS19780 at 4136.975 kb on + strand, within BWI76_RS19780 at 4136.990 kb on - strand, within BWI76_RS19780 at 4137.365 kb on + strand at 4137.522 kb on + strand at 4137.747 kb on + strand, within BWI76_RS19785 at 4137.922 kb on - strand, within BWI76_RS19785 at 4137.935 kb on + strand, within BWI76_RS19785 at 4138.357 kb on - strand, within BWI76_RS19785 at 4138.387 kb on - strand, within BWI76_RS19785 at 4138.422 kb on - strand, within BWI76_RS19785 at 4138.554 kb on + strand at 4138.562 kb on - strand at 4138.837 kb on - strand, within BWI76_RS19790 at 4138.964 kb on - strand, within BWI76_RS19790 at 4139.086 kb on + strand, within BWI76_RS19790 at 4139.115 kb on + strand, within BWI76_RS19790 at 4139.181 kb on + strand, within BWI76_RS19790 at 4139.189 kb on - strand, within BWI76_RS19790 at 4139.393 kb on + strand, within BWI76_RS19790
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,136,674 - BWI76_RS19780 0.55 -0.4 4,136,725 - BWI76_RS19780 0.57 -0.6 4,136,808 - BWI76_RS19780 0.62 -0.1 4,136,853 - BWI76_RS19780 0.65 -0.6 4,136,975 + BWI76_RS19780 0.71 +0.7 4,136,990 - BWI76_RS19780 0.72 -1.1 4,137,365 + -0.2 4,137,522 + +1.7 4,137,747 + BWI76_RS19785 0.22 +0.9 4,137,922 - BWI76_RS19785 0.38 +0.3 4,137,935 + BWI76_RS19785 0.39 -1.4 4,138,357 - BWI76_RS19785 0.78 +0.4 4,138,387 - BWI76_RS19785 0.81 +1.5 4,138,422 - BWI76_RS19785 0.84 +0.2 4,138,554 + +0.0 4,138,562 - -0.7 4,138,837 - BWI76_RS19790 0.23 -0.8 4,138,964 - BWI76_RS19790 0.36 -1.5 4,139,086 + BWI76_RS19790 0.48 -0.4 4,139,115 + BWI76_RS19790 0.50 -0.0 4,139,181 + BWI76_RS19790 0.57 +0.4 4,139,189 - BWI76_RS19790 0.58 -0.2 4,139,393 + BWI76_RS19790 0.78 +0.7
Or see this region's nucleotide sequence